Lven008746.1
Basic Information
- Insect
- Lepidotrigona ventralis
- Gene Symbol
- Lztr1
- Assembly
- GCA_002806875.1
- Location
- NIPQ01090295.1:48603-51789[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-13 6.9e-11 42.8 0.3 3 108 327 469 325 471 0.88 2 4 2.2 9.1e+02 0.6 0.0 77 108 470 501 466 503 0.87 3 4 5.1e-19 2.1e-16 60.6 0.0 9 96 563 650 555 665 0.85 4 4 1.2 4.9e+02 1.5 0.0 76 100 664 688 660 697 0.79
Sequence Information
- Coding Sequence
- ATGCCAGAATGCGACGAATTTGTTGGAGCCAGGCGAAGCAAACATACTGTTGTAGCATACAAAGATGCAATCTATGTGTTTGGTGGTGACAATGGTAAAAGAATGTTGGATGATTTATTGAGATTTGATGTGAAAGAAAAGTCCTGGGGACGTGCATTTGCAACAGGAACACCTCCTGCTCCAAGATATCATCATTCTGCAGTTGTGCATGACTCTTCTATGTTTGTATTTGGTGGTTACACCGGTGACATACATTCCAATTCGAATCttactaataaaaatgatttatttgagTACCGATTTCAAACTGGCCAATGGACAGAGTGGAAATTTATTGGGAAAACTCCTGTAGCTAGATCTGCACATGGAGCTGCTGTCTATGATAACAAGTTGTGGATATTTGCTGGTTATGATGGCAATGCAAGATTAAATGACATGTGGACAATATCATTATTAccTGGAGAACCAAGAGTATGGGAAGAGGTTGTTCAGTCTGGTGATTGTCCACCAACCTGTTGTAATTTTCCTGTTGCAGTAGCACGTGAATGCATGTTTGTATTTAGTGGCCAAAGTGGAGCTAAGATTACAAATAGTCTCTTTCAATTCCATTTTCAAGAAAAGCGATGGACGCGAATTTCAACGGAACATATACTTCGTGGTGCCCCGCCTCCGCCTGCGCGACGATATGGTCACACCATGGTCAGCTTTGATAGACATCTTTACGTGTTTGGTGGTGCAGCTGATTCTACGTTACCCAACGATCTTCATTGCTACGATCTCGATACGCAAAcatggaatattattttaccatCGGCTGACAGCCAGGTTCCTTCTGGTCGATTGTTTCATGCAGCGGCAGTAATTGGGGAAGCGATGTTCATTTTCGGTGGAACAGTCGATAACAATGTCCGATCCGGAGAGACATATCGATTCCAATTTTCATCGTATCCAAAATGTACTTTGCACGATGATTTCGGAAGATTGTTGAACGGACGTCTTTTCTGTGATGTAGAATTTATAGTAGGTGATACGGAAGCCAAAATACCCGCTCACATAGCTATCGTAGCGGCTCGTTCACAGTTTCTTAGGACGCGCATTAGACAAGCTCGAGAAAAACGAGATAGTCATTTAGAAGAAGTATTTGGAACTGTGGATGTACCGATCAAAGATATGCCATTGTTAGAAGTAAGATTGACAGATGCTGTACCAGAGGCATTTGAAATGGTtctgaattatatttacaccGATCGCATTGATCCAACAAGAAGAAGCGAAGACGGATCAAATAATCGTGCTGAAGATCCATTAAGCAATCGAATCGTGCTTCTTATGATGGATGTTTATCGCTTAGCTTTGCAATTCAACATGAAACGATTAGAGCAGTTATGTGTCCAATATTTGAAGGCGACTATAAGCAACGCTAACGTTTTGAAAGCGTTGCATAATGCCGCTTCCTtaaacttatattttataaaggaGTTCTGCTTAAGTTTTATCGTGAAGGAGATCAATTACAATCAGATTGTGATGAGCAAGGAATTCGAGACTTTAGATCAACCTTTGATGGTAGAAATTATTAGGAAAAGACAGATGCCTCAAAGAGGTGTATTTCTTAAACACTGTGATCTTATTACAGGCTCGACATTGGAAGAGGATATGGAGGCATTTCTTAAAAGTGTTGGCAGAGAATTCTGTGATATAACGCTCATGTTAGATGGTGTGCCAATTCCGGCTCATAAGGCTATTCTTGCGGCACGGTGTGGCTATTTTGAAGGAATGTTCCGATCTTTTATGCCTGAAAATAATACAGTGAACGTACAAATTGGTGAAATGGTTCCATCTTCCGAGTCATTCGACTCTCTGTTAAGGTACATTTATTACGCGGACGTTTCAATGCCGCCTGAAGACTCGTTATACTTATTTACCGCACCAGTTTTTTATGGTTTTACGAATAATCGATTACAAGCGTTTTGCAAGCAGAATCTCGAGATGAATGTCACGTTTGAAAATGTTATACAGATCTTAGAAGCTGCGGATAGAATGCAAGCTGTTGATATGAAGAAATATGCGTTGAATCTCATTGTGCATCATTTTCCGAAGGTTGCGAGGCTACCAAGATTAAAGCAATTAAGTCGCGAACTTTTATTGGATATTTTGGAAGCAGTGGCTGATGAACGCAGCGAGGCACGAACATGCCAGGACATGGCGAATGATTGCTGA
- Protein Sequence
- MPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKRMLDDLLRFDVKEKSWGRAFATGTPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKNDLFEYRFQTGQWTEWKFIGKTPVARSAHGAAVYDNKLWIFAGYDGNARLNDMWTISLLPGEPRVWEEVVQSGDCPPTCCNFPVAVARECMFVFSGQSGAKITNSLFQFHFQEKRWTRISTEHILRGAPPPPARRYGHTMVSFDRHLYVFGGAADSTLPNDLHCYDLDTQTWNIILPSADSQVPSGRLFHAAAVIGEAMFIFGGTVDNNVRSGETYRFQFSSYPKCTLHDDFGRLLNGRLFCDVEFIVGDTEAKIPAHIAIVAARSQFLRTRIRQAREKRDSHLEEVFGTVDVPIKDMPLLEVRLTDAVPEAFEMVLNYIYTDRIDPTRRSEDGSNNRAEDPLSNRIVLLMMDVYRLALQFNMKRLEQLCVQYLKATISNANVLKALHNAASLNLYFIKEFCLSFIVKEINYNQIVMSKEFETLDQPLMVEIIRKRQMPQRGVFLKHCDLITGSTLEEDMEAFLKSVGREFCDITLMLDGVPIPAHKAILAARCGYFEGMFRSFMPENNTVNVQIGEMVPSSESFDSLLRYIYYADVSMPPEDSLYLFTAPVFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAVDMKKYALNLIVHHFPKVARLPRLKQLSRELLLDILEAVADERSEARTCQDMANDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_00216471;
- 80% Identity
- -