Basic Information

Insect: Lepidotrigona ventralis
Gene Symbol: Hr39
Assembly: GCA_002806875.1
Location: NIPQ01091931.1:1104-15657[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3 2.6e+04 -5.3 7.3 116 160 38 83 21 99 0.45

2 4 3 2.6e+04 -13.8 18.4 64 142 418 511 291 546 0.58

3 4 3.9e-08 0.00035 20.7 0.0 1 23 612 634 612 648 0.92

4 4 2e-71 1.8e-67 229.1 0.0 86 408 668 991 638 991 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3	2.6e+04	-5.3	7.3	116	160	38	83	21	99	0.45
2	4	3	2.6e+04	-13.8	18.4	64	142	418	511	291	546	0.58
3	4	3.9e-08	0.00035	20.7	0.0	1	23	612	634	612	648	0.92
4	4	2e-71	1.8e-67	229.1	0.0	86	408	668	991	638	991	0.80

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGTCCAGGCCCTGGGCCTGGTGGTCCTGGCTGGTGGCCAGCCTCGCAATCCTGGAAGACGAATTCTTGCACCGCCGCCGCCTCCTCCTCATCCACTAGTAGTTCGACCATTCCAGACAGCTCCGCCTCCGTCTCTGCTTCCTGCACCACCACTACCTCCTCCCTGGCGACCACCACGTCAGCCACTTCCTCGACCAGCTGCTGTTCCTCCACCCCGTCTGGCAATGGACCGTCTGGAACGATCACTGCTGCCCGCTCTTCCGAAACAGGAAAGAATGTCTCTGTCACGACGATTAACGTACCCCCTAATCAGGATATGCACGAtgGCAAAGGTATATGCAAGTATCTTACCGGACAGAACGGCGTGACAGTATCCGTAGTGTCGAGCTGTGGATCCGTATTAGGGTGTGGGAACGCGAATGTCGCGTCAACCACGGGAATTGGCCCCACCGGTACTACCGGCGGCAGCACCGGTACGCAGAGTATTGGAATTGGAGTCAACGTCCTCAGCCAGAATACGGCCGACGACGACGCGGAGGACAGCGACGTCGAGATAAGCAAAATCGACTTTCGAGGGGTGAATTTGCGtacgaagaagaaacgagatgTATCGGGTAGCCAGAGCGGAGAGAAAATCGGCGACGGAGAGGTCGAAGATGGAAACGTCTGTTACGATGGGAACGACGCGTCTCAACAACAACCCGAGAGGCCCATGTCGTGGGAAGGGGAACTTTCCGACCAAGAAATGTCTTccaatacaattacaaatcaAGATACTCACGAGGATACGTCGATGGAGGGCGTTCAAGTGTGTGGCCCGAGTCCGGGGCCAATGGAGCAAAAATTTCCGATAAAACTAGAACCAGACTTTCAGTCCAATCCAAGATTCACGTTTGGTTCTTTCCACGAGACAGGATTACCCCTGGTTCACGGCCAACAAATACAGCAGCAACGCAACATCGAGAATCTCGAGCAAACGCAGCAAAACGACTTGCCTCTTCTCGTAGGGAAGTTACTCGGTGGTTATAATAGTTCAACTCCAAATCACAGTCCGGTGTTGAATCCTAGACACCATTTAACAAAGCATAGCCATACGAGATCGCAGGTGCCGTCACCGGACTCGGCGATTCATTCCGCATACAGCGTGTTCAGTTCTCCAACGCAAAGTCCCCACGCAGCTCGGCATTCCGCTCTAGGCACGGGAAGTCCGGTCCCGTCTTCGTCGCTGTCCTTGTCGCGACAcagttttaataattcgaCCTCTTCGTTGTCGCTCTCGTTGTCACATTCGCTCTCGAGAAACAATTCGGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCACTCGCCCGTTCAACAACCGAGACATCCGCAACATCACCAGCATCAAGTTGCTCAAGGAAGTCCACTCCATCTACCAGCAACCGCCTCTCCCGTCATTGCTCATCACTATTCCTCCTCTGCACCGGGCTCCGAGCTATCTCCAGAAGGACACACTGCTACAGACGATCAGGAAGACTGCAGAATACCTTCAGCGCCGTCTGGAATATCCACGAGACAGCAATTGATCAACAGCCCGTGTCCAATTTGCGGCGACAAAATCAGCGGCTTTCATTACGGCATATTCTCGTGCGAGTCGTGCAAGGGATTTTTCAAACGCACCGTCCAGAATCGGAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTCGCTACCAGGAAAAAATGCCCCGCCTGTAGATTTGACAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATTAGAGAGGATCGCACCAGGGGTGGTAGAAGTACGTACCAATGTACGTATACTCTTCCAGCAAGTCTTGTCGGTAGTCCCGCGGGTAACATCGCCAACGATAAATTAACTACTGGAGGAAATTGTAGCCCAGCTCCAGCTGGTAACGAACATCACTATCCGCCAAGACACCACTCGAACCACTCGCATAAAGTACAAGTGGTACCCCAACTTCTACAGGATATCATGGATGTAGAACATTTATGGCATTACAATGACAATGATCGCATGACTGGGATTCAAAATGCAGGGATGAATCCGACTAGAAATAACGATACAATCCCGTTATTGGGTGTCAGAAGCAGCAGCGGAGGATCTGGAATAGAGAATGACACAGATTCGAGTGTTGAGTGTTCCTCTAATGGAACCACAGGAAATGGCAATCCCAGTAACAGAAGAGACGACAGATCATGCTCTAGTGTTTCAAATGTTGGTAACGAACAATGTGCTGCATCCATTAGTAGCAATTCTCAAATTAACAATACCAATGGTAATCCAACTCAACATCCTGATTTCTTGTCAAACCTCTGCAACATCGCTGACCATCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTgccattatttaaaaacatttcaatcGATGATCAAATctgtttgttaattaattcctGGTGCGAGCTACTGCTCTTTTCATGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACACTGGAACAGGCTAGGCAGCTTGGTTTGGCGACCTGCATTGAGAGGATGCTTGCATTCACTAACAATTTGAGAAGGCTCCGAGTAGATCAATATGAATATGTGGCAATGAAGGTAATAGTACTGTTAACCTCTGATACAAGTGAACTAAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCTTTACAAGCGCTACAGCAATATACTATAGGAAGGTATCCGGAAATGCCTGCCAAGTTTGGTGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGCCAGGCAGGAAAGGAATTGTTAAGTGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTTAATTTGTTGATGGAATTGTTGAGAGGAgatcattga
Protein Sequence: MSEQNGPSEGPGPGPGPGGPGWWPASQSWKTNSCTAAASSSSTSSSTIPDSSASVSASCTTTTSSLATTTSATSSTSCCSSTPSGNGPSGTITAARSSETGKNVSVTTINVPPNQDMHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVASTTGIGPTGTTGGSTGTQSIGIGVNVLSQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDVSGSQSGEKIGDGEVEDGNVCYDGNDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGPSPGPMEQKFPIKLEPDFQSNPRFTFGSFHETGLPLVHGQQIQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGTGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPVIAHHYSSSAPGSELSPEGHTATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPAGNIANDKLTTGGNCSPAPAGNEHHYPPRHHSNHSHKVQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGMNPTRNNDTIPLLGVRSSSGGSGIENDTDSSVECSSNGTTGNGNPSNRRDDRSCSSVSNVGNEQCAASISSNSQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIGRYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733987;
90% Identity: iTF_00982346;
80% Identity: iTF_00873849;