Lko_26081-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- CDC5L
- Assembly
- GCA_002313205.1
- Location
- NNCF01127400.1:168848-172325[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 1.8e-14 53.1 1.8 2 46 9 54 8 54 0.97 2 2 2.9e-12 2.1e-09 36.9 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAATCATGATAAAGGGTGGTGTGTGGAGGAATACAGAAgaTGAAATTTTGAAAGCTGCTGTGATGAAATATGGCAAAAATCAGTGGTCACGAATTGCATCACTTCTCCATCGCAAATCTGCAAAGCAATGTAAAGCAAGATGGTACGAATGGTTAGATCCAAGTATTAAAAAGACTGAATGGAGCagagaagaagatgaaaaattgCTTCATTTGGCCAAGCTCATGCCCACACAGTGGCGTACTATAGCGCCCATTATTGGTAGAACTGCGGCGCAGTGTTTAGAAAGATATGAATACTTACTgGATCAAGCTCAGAAAAAGGAAGAAGGGGAGGATGCAGCTGATGATCCACGGAAATTAAAGCCAGGAGAAATAGATCCCAATCCAGAAACAAAACCAGCCCGCCCTGATCCAAAAGATATGGATGAAGATGAGTTGGAAATGCTTTCGGAAGCCAGAGCTCGACTTGCTAATACACAAGGTAAAAAAGCTAAACGCAAAGCTCGAGAAAAACAATTGGAGGAAGCTCGGAGATTGGCAGCTCTGCAAAAACGAAGAGAACTTAGGGCTGCTGGAATTGAGCTGGCTGCtcgaaagaagagaaagagaggTGTAGATTACAATGCTGAAATCCCGTTTGAGAAAAGGCCTGCTACTGGATTCTATGATACTAGTAAGGAAGAAATAGATGCAACTGCGCCAGATTTTGCTCGCTTGAGACAACAGCATTTAGATGGGGAATTACGCACAGAAAGAGAGGAGagGGACCGAAGAAAAGATAAGTTAAAATTGAAGCAACGCAAGGAAAATGATATTCCTGTCGCTATGTTACAAAATCAAGAACCTGCCAAGAAACGAAGCAAATTGGTGTTGCCGGAGCCTCAAATTTCTGATCAAGAGTTGCAACAAGTTGTAAAACTTGGTCGTGCTAGTGAAGCTGCCCGAGAAGTCGCGACAGAAGGCGGTCAGCAGCCTTCCGATGCATTAATAGCAGATTATTCCCTTACTCCCGCTGGCGCTACAAGGACTCCTAGAACACCTGCTCCAACAACCGACAGAATTTTGCAAGAAGCTCAAAATATGATGGCTTTGACACATGTTGACACACCTCTGAAGGGAGGTTTAAACACACCTCTTCAGAGCTCCGATTTCAGTGGAATTACTCCACAGCGAGAAGTTGTCCAAACCCCTAACACTGTGTTGGCTACTCCGTTCCGAAGTCAACGAAGTGAAGGAGGTCGAACACCTGGATCAGTCGCTGGTTTTAATACTCCAAGGTCTGAAGCGGGTGTAGGGAGCACTAGGCTCAATCCTACGCCCATTAGAGATAAACTAAGTATTAATCCAGAGGAAGGATTAGATGTCGGAGATACCCCTCAAGCATTTAATAATTACCAACGACAGCTGAAAGAACAATTGCGTCAAGGCTTAAGCAGCTTGCCTGCTCCTAGAAACGATTATGAAATTGTTGTTCCCGAAGAGGAGGAGAGCGAACCTGCTCCTGAAGCTGGAAGTACTATTGAAGACCAAGCCGACGTTGATGCAAGGTTTGCCGCTGAACTTCGGGCAAAAAAGGAGCAGGAACTTCGGAGTCGATCTCAAGTCGTTCAAAGAGATTTGCCACGACCGATTGATATTAATACAGCAGTTTTAAGACCCCCACATACTGATCCCCCCCTTACTGAGCTTCAGAAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAARKKRKRGVDYNAEIPFEKRPATGFYDTSKEEIDATAPDFARLRQQHLDGELRTEREERDRRKDKLKLKQRKENDIPVAMLQNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEAAREVATEGGQQPSDALIADYSLTPAGATRTPRTPAPTTDRILQEAQNMMALTHVDTPLKGGLNTPLQSSDFSGITPQREVVQTPNTVLATPFRSQRSEGGRTPGSVAGFNTPRSEAGVGSTRLNPTPIRDKLSINPEEGLDVGDTPQAFNNYQRQLKEQLRQGLSSLPAPRNDYEIVVPEEEESEPAPEAGSTIEDQADVDARFAAELRAKKEQELRSRSQVVQRDLPRPIDINTAVLRPPHTDPPLTELQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759212; iTF_01286355; iTF_00306870; iTF_00840704; iTF_00894711;
- 90% Identity
- iTF_00759212;
- 80% Identity
- -