Lnig026328.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- CDC5L
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010002664.1:12729-31442[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-17 6.2e-14 53.0 1.8 2 46 9 54 8 54 0.97 2 2 1.2e-11 2e-08 35.4 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCACGAATAATGATAAAAGGTGGTGTGTGGCGGAATACGGAGGATGAAATCCTCAAAGcggctgtaatgaaatatggtAAAAACCAGTGGTCACGTATTGCTTCACTCCTACATCGCAAGTCAGCGAAACAGTGTAAAGCCCGATGGTATGAATGGCTCGATCCAAGCATCAAGAAGACGGAATGGAGTCGAGAAGAGGACGAGAAGTTGCTGCATCTCGCTAAGCTGATGCCAACGCAGTGGAGGACGATATCACCTATCATTGGGCGTACAGCTGCACAATGTTTAGAGCGATACGAATATCTACTGGATCAAGCACAGAAGAAGGAGGATGGGGAAGACGTGGCCGACGACCCCCGGAAGTTGAAACCCGGAGAGATTGATCCCAACCCGGAGACGAAGCCAGCTCGACCGGATCCCAAGGACATGGACGAGGACGAGCTTGAGATGTTGTCCGAGGCCAGAGCCAGGCTGGCTAACACCCAGGGCAAGAAAGCAAAGCGCAAGGCGCGCGAGAAACAGCTGGAGGAAGCCCGCCGCTTGGCCGCGCTACAGAAGCGTCGTGAGTTGCGCGCCGCCGGCATCCGCTTGGCCCCGCGCAAGAAGAAGAAGCGGGGCGTGGACTACAACAGAGAGATCCCCTTCGAGAAGCGGCCCGCCATCGGCTTCTACGACACGAGCAACGAGGAGGTGGATCCGTCCGCTCCCGACTTCACACGGCTCAGGCAGCAGCACCTCGACGGTGAACTGCGGTCGGAGAAGGAAGAGAAAGAGCGTCGGAAGGACAAGAACAAGCTGAAGCAGCGCAAGGAGAACGACATCCCGGTGGCGATGCTGCAGAACCAGGAGCCGGCCAAGAAGCGGAGCAAGCTGATCCTGCCGGAGCCGCAGATCTCCGACCAAGAGCTGCAGCAGGTGGTGAAGCTCGGTCGGGCCAGCGAGCAGGCCAGAGAGGTGGCGACTGAGTCTGGCGTGCAGCCCTCGGACACTCTGCTTGCCGACTACTCCATCACCCCCGCCGGCGTGTCCCGCACCCCGCGCACCCCCGCGCCCGTCACCGACAGGGTGCTCCAAGAGGCGCAGAACATGATGGCGCTCACACACGTGGACACGCCGCTCAAAGGCGGACTGAACACTGCGCTGACCAGCATGGACTTTGGCGGCGTGACGCCGCAGTCGGCCAGCGTGGCCACGCCCAACACCGTGCTGGCCACGCCGTTCCGCAGCCAGCGCAGCGAGGGGTTCAGCACGCCGGGCATGGCCCCGGTGAACGCCGCCCAGCCCACGCCTGTCAGGGACAAGCTCAGCATCAACCCCGAGGAGGGGCTGGAGGGGGCCACGCCGCAGGCATTCAACGTGCATAGGAGACAGCTGAAGGAGCAACTGCGCCAGGACTTCGGCACTCTTCCCGCGCCGCGCAACGATTACGAGATCGTCGTTCCCGAGGAGGAGGAGATGGAGGTTGAGGAGGCCAGCGGGCCGAGCGTGGAGGACCAGGCGGACGTGGACGCGCGGCGCGAGGCACGTGTGCGCGCGCAGCAGGAGGCGGAGCTGCGCCGGCGCTCGCAGGTGGTGCAGCGCCGCCTGCCGCGGCCGCAGGAGATCAACAGTGACGTGCTGAGGCCGCCGCACACCGATCCGCCGCTCACAGACCTGCAGAAGGCGGAGGAGCTGATCAAGCGGGAGATGATGACGATGCTGCACTACGACGCCGCACTCAACCCCATAGAGCCGTCGCAGCACGTGCGCGTCACCACGCAGGCCCAGCACCTAGCTTACCTCGAGGCCCACCCGTACCACGGTGAGTAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTISPIIGRTAAQCLERYEYLLDQAQKKEDGEDVADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIRLAPRKKKKRGVDYNREIPFEKRPAIGFYDTSNEEVDPSAPDFTRLRQQHLDGELRSEKEEKERRKDKNKLKQRKENDIPVAMLQNQEPAKKRSKLILPEPQISDQELQQVVKLGRASEQAREVATESGVQPSDTLLADYSITPAGVSRTPRTPAPVTDRVLQEAQNMMALTHVDTPLKGGLNTALTSMDFGGVTPQSASVATPNTVLATPFRSQRSEGFSTPGMAPVNAAQPTPVRDKLSINPEEGLEGATPQAFNVHRRQLKEQLRQDFGTLPAPRNDYEIVVPEEEEMEVEEASGPSVEDQADVDARREARVRAQQEAELRRRSQVVQRRLPRPQEINSDVLRPPHTDPPLTDLQKAEELIKREMMTMLHYDAALNPIEPSQHVRVTTQAQHLAYLEAHPYHGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872201;
- 90% Identity
- -
- 80% Identity
- -