snap_masked-scaffold_605-processed-gene-5.23-mRNA-1
Basic Information
- Insect
- Ischnura elegans
- Gene Symbol
- CDC5L
- Assembly
- None
- Location
- scaffold:491787-513770[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-17 5.7e-14 52.5 1.8 2 46 9 54 8 54 0.97 2 3 9e-12 1.8e-08 34.9 0.1 1 45 60 103 60 104 0.93 3 3 6.9 1.4e+04 -3.2 1.7 6 18 761 773 760 774 0.85
Sequence Information
- Coding Sequence
- ATGCCGCGTATTATGATAAAAGGAGGTGTTTGGAGGAACACCGAGGATGAAATCTTGAAAGCAGCTGTAATGAAATATGGAAAGAATCAGTGGTCTCGTATTGCCTCACTTCTGCACAGAAAATCAGCAAAGCAGTGCAAAGCTCGTTGGTATGAATGGTTAGATCCTAGTATCAAGAAAACAGAATGGAGTAGAGAAGAAGATGAAAAGCTTTTGCACCTTGCAAAGTTGATGCCTACACAATGGAGAACAATATCTCCTATCATCGGACGGACTGCTGCTCAATGCTTGGAAAGATACGAATACCTATTAGATCAAGCGCAGAAAAAAGAGGAAGGTGAGGATGCTGCTGATGATCCTCGAAAATTGAAGCCTGGAGAAATTGATCCTAATCCAGAAACAAAGCCAGCAAGACCCGACCCTAAGGACATGGATGAAGATGAGCTGGAAATGCTTTCTGAAGCTCGAGCTCGTCTGGCGAATACTCAGGGTAAAAAAGCGAAGCGAAAAGCGAGAGAAAAACAGCTCGAAGAAGCTAGAAGACTGGCTGCTTTACAGAAAAGGAGAGAGTTACGAGCTGCAGGAATTGAGTTGCCTCCACGAAAGAAGAAGAAACGAGGTGTTGACTACAATGCTGAAATCCCTTTTGAAAAGAGGCCTGCTCCAGGTTTCCATGATACAAGCACTGAAGAATACGATCCTATGGCTCCTGATTTTGCACGTCTTAGGCAGCAGCACTTGGATGGTGAACTACATTCAGAGAGGGAAGAGCGAGAAAGGCGAAAGGACAAACAGAAGCTGAAGCAAAGAAAGGAAAATGACATCCCAGTGGCAATGCTCCAGAATCAAGAACCTGCTCGTAAAAGAAGCAAACTCGTTCTTCCAGAACCACAGATATCAGATCAGGAATTGGAGCAGGTGGTGAAACTTGGGAGGGCTAGTGAGGCTGCTCGAGAGGCCGCCACTGAAGCTGGTGGTGGTGCGGCATCTGATGTCCTTCTGGCAGACTACACATCACTGTCTGGATCTGGTGGGGGAGCATCAGCCCTTAGAACTCCACGAACGCCTGCTCCCACTACTGACAAAGTTTTACAGGAAGCACAAAATATCATGGCACTGACTCATGTTGACACTCCTCTGAAGGGTGGTCTGAATACAACATTGCATGAGTCTGATTTTGGTGGCGTGACTCCGCAGAGGGATGCCCTCACCACACCCAATACACTTCTCGCCACCCCATTCCGAAGTGTGCGAGGTGCTGATGGAAGGACACCAGGGACTGTTGGTGCAGTCAGTGTAGCTGGAGGAAGTAGCTTTGGCACACCTGCATCAGATGCAGGCCAGAAAGTTGGTGCAACTCCCACGCCCACACCTATTCGGGACAAGCTGAATATCAACCCAGAAGAAGCACTTGATGTTGGAGATACACCACAGGCAGTCCGCAGCTACAGGAGACAGTTGAAGGAACAGCTTCGCCAGGGTCTCAGCGCCCTCCCAACTCCAAGAAATGATTATGAGATTGTAGTGCCTGAGGAGGAGGAAGAGGGTGCAGCAGGAATGGATATGGAAGAAATGGCCTCAAATGAAGAAGATCAAGCTGATGTTGATGCAAGAAGAGAGGCCGAGGAAAGGGCTCAGCGTGAAAAGGAAATGAAGAGCCGATCTCAGGCAGTTCAGAGAGATTTGCCACGACCTCAGGAAGTTAATATGGCTATCCTTCGTCCACCTAATACCGAACCACCTTTGACTGAACTTCAAAAGGCCGAGGAGCTGATCAAGGGGGACATGCTGACAATGCTTCATTATGATGCAGTGCACTCACCGACACCAGCTCAGCTGGACCAGCGAGCTTCGGGAAGGAGGAAAGGAGGCCCTGGGGGAAGCACACCTATTCTCTCTCAAGCACAACACTTGGCATACCTAGAGAGCCATCCATATGTCACGTTTCCTGAAGATGAGCTGGAAAAGGCTCGTGACTCGTTGAAGCAAGAAATGGAGGTGGTCAAGCATGGAATGGGGCATGGTGAATTATCCTTGGAAGCATATTCCCAAGTCTGGGTAGAATGCTTAGCTCAAGTTTTGTTTCTTCCATCACAAAACCGGTACACAAGAGCCAACTTGGCAAGTAAAAAGGATCGGCTAGAGTCTTTGGATAAGAGGTTAGAACAGAATAGGAGCCACATGACTAGAGAGGCTAAGAGAGCTGCTAAAATGGAAAAGAAATTGAAAGTTTTGACTGGAGGTTATCAGTCCAGAGCTCAAGCATTGATTAAGCAGCTTCAAGAATTGCATGAACAATTAGAACAAGCTCACTTGGAACTGTCAACATTCAAGTTTCTCCAACAGCAAGAGATGGCTGCCATACCAAGAAGGATAGAGTCTCTGACAGATGATGTAAATAGGCAAACTGAACGAGAGAAGGCCTTGCAAAAGAAATATGCTGAGTTGGCCCTTGCCCTCGAAGAGATGAAGCATTCCTCATAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTISPIIGRTAAQCLERYEYLLDQAQKKEEGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELPPRKKKKRGVDYNAEIPFEKRPAPGFHDTSTEEYDPMAPDFARLRQQHLDGELHSEREERERRKDKQKLKQRKENDIPVAMLQNQEPARKRSKLVLPEPQISDQELEQVVKLGRASEAAREAATEAGGGAASDVLLADYTSLSGSGGGASALRTPRTPAPTTDKVLQEAQNIMALTHVDTPLKGGLNTTLHESDFGGVTPQRDALTTPNTLLATPFRSVRGADGRTPGTVGAVSVAGGSSFGTPASDAGQKVGATPTPTPIRDKLNINPEEALDVGDTPQAVRSYRRQLKEQLRQGLSALPTPRNDYEIVVPEEEEEGAAGMDMEEMASNEEDQADVDARREAEERAQREKEMKSRSQAVQRDLPRPQEVNMAILRPPNTEPPLTELQKAEELIKGDMLTMLHYDAVHSPTPAQLDQRASGRRKGGPGGSTPILSQAQHLAYLESHPYVTFPEDELEKARDSLKQEMEVVKHGMGHGELSLEAYSQVWVECLAQVLFLPSQNRYTRANLASKKDRLESLDKRLEQNRSHMTREAKRAAKMEKKLKVLTGGYQSRAQALIKQLQELHEQLEQAHLELSTFKFLQQQEMAAIPRRIESLTDDVNRQTEREKALQKKYAELALALEEMKHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00872201;
- 90% Identity
- iTF_00306870;
- 80% Identity
- -