Lful017314.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lasius fuliginosus
Gene Symbol
Hr39
Assembly
GCA_949152495.1
Location
OX424447.1:17534668-17538669[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.82 1.1e+04 -3.4 9.4 84 170 27 113 8 116 0.64
2 5 0.31 4.1e+03 -2.0 6.8 51 163 291 403 250 421 0.64
3 5 3 4e+04 -7.3 9.5 76 160 444 533 410 550 0.45
4 5 3.1e-08 0.00041 21.0 0.0 1 22 616 637 616 656 0.88
5 5 1.4e-69 1.9e-65 223.1 0.0 199 408 807 1011 760 1011 0.93

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCCGGCTCGGATTCAGCCTGGTGGCCGTCCACACAGACCTGGAAATCATCGGCGTCATCGTCATCGGccgcgacggcggcggcgaccTCATCGTCGACTTCCGCCCCCTCGGCAGCGGGTTCCGCGTCCGTTTCCGTTTCCTGCGCCACGAGCTCCAGCTCGTCCCCGACGAGCTCCTCCACCTCGACCAACACGTCCGCGACCTGTTGCCCTCTGTCTTGCATCGGTGTTTCGATGAGCCCGAGCCGTTCCACGGAGACGGGGAAAAACGTGTCCGTCACCACTATTAACGTGCCGCCCAATCAAGAGATGCACGATGgtaaaGGAGTGTGTAAATATCTCGGGGGACAGAACGGCGTGACGGTGTCGGTGGTGTCGACCTCGGTGCTGGGATGCGGAAATTCCGCCGTCCAGACGAGCGAAATCTGCACGAATACCGGGGGGCCGTCGCATAGTATCGGCATCGGAATCGGCGGTATCCTCGCCGCGAACGCGGCCGACATCGACGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATTGACTTCAGGGGTGTGAATTTGCGCTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAACGGCGACAAGATCGGCGACGGGGACGCGAATGGCGACGGCGCGGGATGCTGCGACGATAATTCGCAGCAACAGCCCGAGAGACCGATGTCGTGGGAGGGAGAACTGTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCATAACGAGGAAACGTCCATGGAGGGAGTTCAGGTGTGCAGTACGAGTCCTGGACCCATGGAACAGAAATTTCCGATCAAGTCAGAGCCGGATTTTCGATCTAGTCCGGCTTTCACAATAGGATCCTTTCACGACGCCGGATTACCCATGACGCACAACCAACAATTgcaacagcagcaacagcaacaacgCGGTATCGAAAATCTCGAGCAGACTCAACAGAGCGACCTACCGCTTCTCGTAGGCAAGCTTCTCGGCGGATACAACAATTCCACGCCTAATCACAGTCCTATTCTCAATCCGCGACATCATCTAACCAAGCACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCCGCATACAGCGTCTTCAGTTCACCGACGCAGAGCCCTCACGCGGCACGACACTCCGCCCTAGGTGCGGGCAGTCCGATACCGTCCTCGTCGTTGTCCCTCTCTCGGCACAGCTTCAACAATTCGACCTCCTCGCTATCCTTGTCGCTGTCGCATTCGCTTTCGAGAAACAACTCGGACGCTTCCAGTAGCTGTTACAGCTACGGCTCGCTTAGTCCGCCTACGCATTCACCCGTCCAGCAGCCGAGACATCCGCATTCGCACTCGCAGCATCACCAGCATCAAGTGGCGCAGGGTAGTCCGTTGCATCTTCCGGCAGCTTCGTCCGCTGTCGCCGCGCATCATTACTCGTCCTCTTCCGTGCCAGGCTCGGAACTGTCCCCGGACGGCCACCCGGTCGCGGAGGATCAGGAAGACTGTAGAATACCCTCGGCCCCGTCGGGTATTTCCACCAGGCAGCAATTGATAAACAGCCCTTGTCCGATTTGCGGCGACAAGATAAGCGGATTTCATTACGGTATCTTCTCGTGCGAGTCGTGCAAGGGATTCTTCAAGCGCACCGTGCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGTCCGGTCACCGTGGCAACGAGGAAAAAATGCCCGGCCTGCCGCTTCGAGAAGTGCCTCAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGCAGGAGCACGTATCAGTGCACCTATACTCTACCGAATCTCGTCGGCAGTCCCGCCGGCGGTATGGCCGGCAACGAAAAACTGACGGCGGCGGGCAATTGCAGCCCGGCACCTGCCGGAAGCGAGCACCATTACTCGGCCAGATATCACTCGAATCATTCTCACAAGATGCAGGTGCCGCAACTCTTGCAAGACATTATGGACGTGGAGCATCTCTGGCATTACAATGACAATGATCGGGTAAGCGGGGGAATATCCGGGAACGCGAGGAACATCTCTGTCGGCGGCGACAGCAGCAGTATGCTGCTCGGTGGATTCGGTAGTGGCCCATCGGCGCTCGGCGGAACTGCGACTGTTATCGGCGCCGGAAATAACGTAGGCGCGGTGGAATGTTCGTCGAACGATTCGAGCAACGTCGATACCAACAacagaggaggaggagagtcGGGTAGCCCCGCCGGCTCGACTTCCACAGGGGCGCCCGATCAACATTCCACGAACGGCAATACCGTGAATAATAGCAATTCTCAAATCGCCAGTAATTTCAATAATGGCAATCCGACGCAACATCCGGACTTTCTGTCTAATCTGTGCAACATCGCGGACCATCGACTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGTTATTCAAGAATATCTCGATCGACGACCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTACTACTCTTCTCCTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATCAGAGTGTCTCTCGGCAAGTCGATCACTTTAGAACAAGCTAGAGAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCAACAATCTGCGAAGGCTGAGAGTAGACCAATACGAATATGTTGCAATGAAGgTGATCGTGCTGTTAACGTCCGACATAAGCGAATTAAAGGAACCTGAAAAGGTCAGAGCTTCTCAGGAAAAAGCCCTTCACGCATTGCAGCAATACACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTATTGAGAATTCCAGATCTACAAAGAACGTGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCCTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGSDSAWWPSTQTWKSSASSSSAATAAATSSSTSAPSAAGSASVSVSCATSSSSSPTSSSTSTNTSATCCPLSCIGVSMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNSAVQTSEICTNTGGPSHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGAGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPAFTIGSFHDAGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPAASSAVAAHHYSSSSVPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFEKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPNLVGSPAGGMAGNEKLTAAGNCSPAPAGSEHHYSARYHSNHSHKMQVPQLLQDIMDVEHLWHYNDNDRVSGGISGNARNISVGGDSSSMLLGGFGSGPSALGGTATVIGAGNNVGAVECSSNDSSNVDTNNRGGGESGSPAGSTSTGAPDQHSTNGNTVNNSNSQIASNFNNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARELGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDISELKEPEKVRASQEKALHALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_00867436;