Basic Information

Insect: Lasioglossum vierecki
Gene Symbol: Hr39
Assembly: GCA_028455595.1
Location: CM052336.1:25440138-25448761[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 2.1e+04 -6.5 6.3 139 156 49 66 22 102 0.46

2 5 2 2.1e+04 -5.3 9.6 47 163 311 397 245 429 0.54

3 5 1.5 1.6e+04 -4.9 10.9 69 162 431 524 408 539 0.59

4 5 4e-08 0.00041 20.1 0.0 1 21 605 625 605 629 0.92

5 5 1.4e-70 1.5e-66 225.7 0.1 188 408 763 979 651 979 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	2.1e+04	-6.5	6.3	139	156	49	66	22	102	0.46
2	5	2	2.1e+04	-5.3	9.6	47	163	311	397	245	429	0.54
3	5	1.5	1.6e+04	-4.9	10.9	69	162	431	524	408	539	0.59
4	5	4e-08	0.00041	20.1	0.0	1	21	605	625	605	629	0.92
5	5	1.4e-70	1.5e-66	225.7	0.1	188	408	763	979	651	979	0.89

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCAGTGAGGGCCCAGGGCCGGGTCCAGGACCAGGCCCTGGCTGGTGGCCTACCTCACAGTCTTGGAAGACTAACTCCGCTGCGTCCGCTTCCTCGTCTGCTGGCTCGACTGCTTCAGACAGCTCCGCCTCCGTCTCTGCGTCCTGCACCGCCTCTACCTCCTCCCTGGCAACTACCACTTCGGCTACCCCCTCGTCCAGCTGTTGTTCCTCGACTCCCGGCGGACACTCCTGCACCATCACCGCGGCCCGCACCTCCGAGACGGGCAAGAACGTCTCTGTTACGACAATCAATGTACCTCCGAATCAAGACTTACACGATGGAAAAGGTATCTGCAAGTACCTTACCGGTCAGAACGGCGTGACAGTGTCGGTAGTTTCGAGCTGCGGGTCTGTTCTTGGATGCGGGAACGCGAACGTGGTATCCACGACGGGAATTGGGACAAGCACAGGCACCCATAGCATAGGCATCGGAATTGGAGTCGGTGTCCTCGGTCAGAACGCCGTCGAAAATGATGCCGAGGATAGCGACGGCGAAATAAGCAAGATTGATTTCCGAGGCGTGAATCTACGTACAAAGAAGAAACGGGATGTATCCGGGAACGGTGAGAAAATCGGCGACGGTGACGTCGACGACGGGAATGGCTGTTACGATGGAAACGACGTCTCGCAACAGCAGCCTGAGAGACCCATGTCGTGGGAAGGTGAATTATCCGATCAAGAAATGTCTTCCAATACTATCACGAATCAGGATACGCACGAGGAAACATCGATGGAAGGTGTGCAAGTTTGCGGTCCGAGTCCCGGGCTCATGGAGAAATTCCCCATAAAACCGGAACCAGACTTCCGATCCAGTCCGGGGTTCACGTTAGGATCCTTCCACGACGCAGGAATATCTCTGAGCCACGGTCAGCAGATGCAACAGCAACAACAGCAGCAGCAGCAGCGGAACATAGAGAACATCGAGCAGACACAGCAGAGCGATTTACCTCTTCTTGTGGGGAAACTGCTCGGCGGTTACAACAGCTCCACCCCGAACCACAGTCCCGTGTTGAACCCCAGACATCACTTGACCAAACATAGCCACACGAGATCTCAGGTGCCGTCACCAGATTCCGCGATTCACTCCGCGTACAGTGTGTTCAGCTCGCCGACACAGAGTCCGCACGCAGCCCGGCACTCTGCCCTAGGAGCAGGAAGTCCAGTCCCGTCTTCGTCGCTGTCCCTTTCCCGACACAGCTTCAACAACTCGACTTCCTCGTTATCGTTGTCGCTGTCACATTCGCTCTCGAGAAACAACTCGGACGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTCAGTCCACCTACGCATTCTCCCGTCCAACAACCGAGGCATCCACAGCATCATCAACACCAAGTTGCTCAAGGAAGTCCGCTCCACTTGCCGGCCACGGCTTCGTCCAGTGTTCCCCATCACTATTCCTCATCCGTGCCCGGTTCCGAGCTTTCTCCCGAAGCACACCCCACCGGAGACGACCAGGAAGATTGTCGAATACCCTCCGCTCCGTCTGGTATCTCTACCAGACAGCAGTTGATCAATAGTCCCTGTCCAATATGCGGAGACAAGATCAGCGGCTTCCACTATGGGATATTCTCCTGCGAGTCGTGCAAGGGATTCTTTAAACGCACCGTCCAGAACCGGAAGAATTATGTGTGCCTTAGGGGCGCCGGTTGTCCGGTCACCGTCGCCACCAGGAAAAAGTGTCCGGCATGCCGGTTCGACAAATGTCTCAATATGGGTATGAAACTCGAAGCAATTAGAGAAGATCGAACGAGAGGCGGAAGAAGCACTTATCAATGTACCTACACTCTGCCAGCAAATCTGGTTGGTAGTCCTGCCGGCGGCATGACTGGCGACAAACTAGGTGCTGGAGGGAACTGTAGTCCGGCTCCAGCTGGTAGCGAACATCATTATTCTGTTAGGCATCATTCAAATCATTCGCATAAAATGCAAGTAGTGCCGCAGCTTCTGCAGGATATCATGGACGTGGAGCATTTGTGGCACTACAACGACAACGATCGAATGTCCGGTGTGCAGCCAGGTGGTGGGAGTGTTTCCAGAAACAACGATGCTATGTTGTTGGGAGGTGTGGGATCTGGAACGGGGAACGATGCTGGGTCAGGAGTAGAGTGTTCTTCGAATGGGACCGCAGGGAATGGGAATTTAAATAACAGAAGAGATGGCAGATCGTGTCCCAATATTTCAAGTGGCAACGACCAACGGGCGCCGTCTGTCAACAGCAATTCTCAGTTAGGGAACAACACGAACGGCAATCCTACTCAGCATCCCGATTTCCTCTCGAACCTTTGCAATATCGCGGACCACCGACTCTACAAGATAGTGAAGTGGTGTAAAAGTCTGCCGTTGTTCAAGAACATCTCGATCGACGACCAGATTTGCCTGTTGATCAACTCTTGGTGCGAGCTGCTGCTCTTCTCGTGCTGCTTTCGCAGCATGAGCACGCCCGGTGAAATCAGAGTGTCTCTCGGCAAGTCGATTACATTGGAACAAGCGAGGCAACTCGGCTTGGCGACCTGTATCGAGAGGATGCTCGCATTTACCAATAATCTGAGAAGACTCAGAGTGGATCAGTACGAATACGTTGCGATGAAGGTGATAGTGCTATTAACCTCCGACACAAGTGAACTGAAGGAACCAGAGAAAGTGAGGGCGTCTCAGGAGAAGGCTCTACAAGCGTTGCAACAGTACACTATAGCAAGGTACCCCGAGATGCCTGCTAAGTTTGGCGAATTGTTGCTGAGAATTCCAGACTTACAAAGGACGTGTCAGGCGGGAAAGGAATTGTTAAGCGCGAAACGTGCCGAAGGAGAAGGCAGCTCGTTCAATTTGTTGATGGAATTGTTGAGAGGAGATCATTGA
Protein Sequence: MSEQNGPSEGPGPGPGPGPGWWPTSQSWKTNSAASASSSAGSTASDSSASVSASCTASTSSLATTTSATPSSSCCSSTPGGHSCTITAARTSETGKNVSVTTINVPPNQDLHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVVSTTGIGTSTGTHSIGIGIGVGVLGQNAVENDAEDSDGEISKIDFRGVNLRTKKKRDVSGNGEKIGDGDVDDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEETSMEGVQVCGPSPGLMEKFPIKPEPDFRSSPGFTLGSFHDAGISLSHGQQMQQQQQQQQQRNIENIEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASSSVPHHYSSSVPGSELSPEAHPTGDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTGDKLGAGGNCSPAPAGSEHHYSVRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMSGVQPGGGSVSRNNDAMLLGGVGSGTGNDAGSGVECSSNGTAGNGNLNNRRDGRSCPNISSGNDQRAPSVNSNSQLGNNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733987;
90% Identity: iTF_00763268;
80% Identity: iTF_00866073;