Lpau006353.1
Basic Information
- Insect
- Lasioglossum pauxillum
- Gene Symbol
- Rel
- Assembly
- GCA_028455745.1
- Location
- CM052304.1:3918318-3922571[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-39 2e-35 122.8 0.8 1 168 79 269 79 270 0.87 2 2 1.6 1e+04 -3.2 0.2 102 145 761 804 759 814 0.66
Sequence Information
- Coding Sequence
- ATGCCAGAGGTCTTTGAAAATTATGCGGTTTACAAAAGTGCAACTGAAAACCTGGATTATATTTCTCATGGACATGATATGTTAATGATGAATGGTCAAGATGCGCTTAGTCCCTTTAATGGATCTCAAGGGACAAGTGCTGCGTCACCTTTTTCATCATCTTTGTCACCACTGTACAACATGGATGTGTCGCTGGGTAGTTTCAAAGATGTCACAGTTATCGGTGAACCGTATCTTACAATTGTGGAGCAACCAATTGAAAAGTTTCGATTTCGATATAAATCAGAGATGATAGGAACACATGGAAGTTTAGTAGGGTCAAGTGCTGGAAGTGGTCGCAATAAACATTTCCCAGCAGTTCAGTTACACAATTATCCCGCAAGTGCAAAAATACAATGCACATTAGTTACATCCGGAGAGGGTAAAAGGATACCTCATGCTCATAGATTGGTGCGTAGAGTAAACGGGGAAGATTGCGATGATCCACATATAATTGACGTCACTCCAGAGAATAATTTTGTTGCAACATTTCATGGGATGGGAATTATACACACAGCAAAGAAATATGTACGAGACGAACTTATTAAAAAAATGCGACACGAAGCAATAGAAAAAAAGAAAAGAGAATGTAGAAGCGATACTCTTACTACTCGAGAAGAAGCCCAGATCAAACACGATGCAGATATTTATCAAAAATGTGTGAATCTAAATAGCGTCGCACTATGCTTTCAAGCATTCGCTTTGGATGAATACAATATCATGAGACCAATACAAAACTGTATTATTTATTCAAAACCTATTAATAATCTGAAAAGTGCATTAACCGGAGAACTGAAAATATGCAGAATTGACAAACACACTAGCAGCGTTGATGGAGGAGAAGAAATTTTTCTACTTGTCGAGAAAGTAGGAAAAAAAAACATAAAAGTCAGATTTTTTGAGGTAAATGAGGATAACTTTGAAGTTTGGAGTGACTATGGACGTTTCTCGGAATTGGATGTACATCATCAATATGCAATTGTATTTCGGACACCGCAATACAAAGATGTTACTATTACATCCCCAAAGGAAGTATTCCTGCAACTAGAAAGGCCAACAGACGGTGACTGTTCCGAGCCAATAAAATTCACTTATAAACCAAGCGATAGAATTATAGGAAAGAAGCGTCAAAGAATTTCCCACTCTGGAAGTAGCGATTTATCGAACTTCGTATTACCTAATTTTAATTGTGAAACAGGAAATATATCAGGAATTTCAAACGGAGATAATATTGATGAATATATAAAACACTTGAACACTCACGAGCCTTTGGTGACCGATGGGCCATCATCTAAACAGCATGAAAATGACATGATGTTTCCTAAAAATATACTTATGGAAGCTAAGAGATTAATGAAATCAGATCCAAAAAATAGTCAAACACATATACGTAAGCTACTTAAAGATCGCTCCACATTTGGAGATTCCCCATTGCACGCAGCACTTCGGTATGGTCAACGTGACGTTGTCAAGTACATGTTAATGTTGATAAGCTCTGATAAGGATTGCAAGATACTTGTCAATGAACAGAATAGTTCTGGCAAAACGCCGCTGCATTATGCAGTTCTACAAAATCTTCCAGAAAGTATAGAAGCATTACTCATGCTTGGAGCTGATCCAAACCGATCAGATGAACAGGGATGTTGTCCATTACACATTGCTGTGAAAAATCCTCAAGCTGAAGCTTGTGTGAAAACTTTATTATCGGATAAAAGAACTAAAATGGAAATACATAATGATGCCGGATGGACACCATTGCAACTTGCAGCAGCAGCTGGTTCATACTATGCAGTATGTTTACTTGTTGAAGCTGGGGTAAATGTAAATAGTACCGATATGTCATACGGTCGAACTGCATTACACATTGCTGTAGACGGCGGACACAAAGACATCGTTACATATTTATTGAAGAAGACGAACATTGCCATAAACAAAAGAAACTTCAGCGGAAATACTGCTTTACACTCAGCAGTTGTATATTCTGGTGTAAGAGCAAAAGAGTTGTGTGCATTGTTAATCAAATATGGAGCGGATCCACACATTCAAAATCATGATAGAGAAACAAGCGATGATGAAAGGAAGACGACCGCACACATAAAAGAAGAAGTTAACTCCGACAATGAAAACTCTGAAGAACTGAATGGACAATCATCATTTGATTTGGCGATGAATAAACCAGATATTTTGCAACTTCTTAACGGTCAAACCAATGAAGCACCAAGTGAAATTTCTTTCGTTATCACTAAACAAGAAGTACAAGATGAGGACTCGCAGAAGGAGTTGTTAAACAATGAGCAGAAACAACAATTGTCCGATATTCTTGATAAAACACAAGGTTGGAGAAAACTTGCCAAACATTTGAAATTTGAATACTTTTTGAGGACATTACAACATACTTCATTGAGCCCATCACTACTCTTATTGAATTACATAGACGTTCAGACATTGATGTCCCTAACCGACCTGGAAACGGCATTACGAGATATTGATGAAACCAAAGCGGCGAATTACATTAATGGAATATCAATTGTACACAAGCAATCTTAA
- Protein Sequence
- MPEVFENYAVYKSATENLDYISHGHDMLMMNGQDALSPFNGSQGTSAASPFSSSLSPLYNMDVSLGSFKDVTVIGEPYLTIVEQPIEKFRFRYKSEMIGTHGSLVGSSAGSGRNKHFPAVQLHNYPASAKIQCTLVTSGEGKRIPHAHRLVRRVNGEDCDDPHIIDVTPENNFVATFHGMGIIHTAKKYVRDELIKKMRHEAIEKKKRECRSDTLTTREEAQIKHDADIYQKCVNLNSVALCFQAFALDEYNIMRPIQNCIIYSKPINNLKSALTGELKICRIDKHTSSVDGGEEIFLLVEKVGKKNIKVRFFEVNEDNFEVWSDYGRFSELDVHHQYAIVFRTPQYKDVTITSPKEVFLQLERPTDGDCSEPIKFTYKPSDRIIGKKRQRISHSGSSDLSNFVLPNFNCETGNISGISNGDNIDEYIKHLNTHEPLVTDGPSSKQHENDMMFPKNILMEAKRLMKSDPKNSQTHIRKLLKDRSTFGDSPLHAALRYGQRDVVKYMLMLISSDKDCKILVNEQNSSGKTPLHYAVLQNLPESIEALLMLGADPNRSDEQGCCPLHIAVKNPQAEACVKTLLSDKRTKMEIHNDAGWTPLQLAAAAGSYYAVCLLVEAGVNVNSTDMSYGRTALHIAVDGGHKDIVTYLLKKTNIAINKRNFSGNTALHSAVVYSGVRAKELCALLIKYGADPHIQNHDRETSDDERKTTAHIKEEVNSDNENSEELNGQSSFDLAMNKPDILQLLNGQTNEAPSEISFVITKQEVQDEDSQKELLNNEQKQQLSDILDKTQGWRKLAKHLKFEYFLRTLQHTSLSPSLLLLNYIDVQTLMSLTDLETALRDIDETKAANYINGISIVHKQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763019;
- 90% Identity
- iTF_00861665;
- 80% Identity
- -