Loen004997.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lasioglossum oenotherae
Gene Symbol
Rel
Assembly
GCA_028455765.1
Location
CM052290.1:3112142-3116878[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.4e-40 2.9e-36 125.1 1.3 1 168 79 269 79 270 0.88

Sequence Information

Coding Sequence
ATGCCAGAGGTCTTTGAAAATTATGCAGTTTACAAAAGTGCAACCGAAAACCTGGATTATATTTCTCATGGACATGATATGCTAATGATGAATGGTCAAGATGCGTTTAGTCCCTTTAATGGATCTCAAGGGACAAGTGCTGCGTCACCTTTTTCAACATCGTTGTCACCACTGTACAACATGGATGTGTCGCTGGGTAGTTTCAAAGATGTCACAGTTATCGGTGAACCGTATCTTACAATTGTGGAGCAACCAATTGAAAAGTTTCGATTTCGATATAAATCAGAGATGATAGGAACACACGGGAGTTTAGTAGGAGCAAATACTGGAAGTGGTCGCAATAAACATTTCCCAGCAGTTCAGTTACACAATTATCCTGCGAGTGCGAAAATACAATGCACATTAGTTACATCTGGAGAAGGTAAAAGGATACCTCATGCTCATAGATTGGTGCGTAGAGTAAATGGGGAAGATTGCGATGATCCCCATATAATTGATGTCACTCCAGAGAATAATTTTGTAGCAACATTTCATGGGATGGGAATTATACACACAGCAAAGAAATATGTACGAGAGGAACTTATTAAAAAAATGCGACACGAAGCAATAGAAAAGAAGAAAAGAGAATGTAGAAGCGATACCCTTACTACTCGAGAAGAAGCTCAGATTAAACACGATGCAGATATTTATCAAAAATGTGTGAACCTAAATAGCGTTGCACTATGCTTTCAAGCATTCGCTTTGGATGAATGCAATATCATGAGACCAATACAAAACTGTATCGTTTATTCGAAACCTATTAATAATCTGAAAAGTGCATTAACTGGAGAACTGAAAATATGCAGAATTGACAAACACACTAGCAGCGTTGATGGAGGAGAAGAAGTTTTTCTACTTGTCGAGAAAGTAGGAAAAAAAAACATAAAAGTCAGATTTTTTGAGGTAAACGAGGATAACTTTGAAGTTTGGAGTGACTATGGACGTTTCTCGGAATTGGATGTACATCATCAATATGCAATTGTATTTCGAACACCACAATACAAAGATCTTACTATTACATCCTCGAAGGAAGTATTCCTGCAACTAGAAAGGCCAACAGACGGTGACTGTTCCGAGCCAGTAAAATTTACTTACAAACCAAGCGATAGAATTATAGGAAAGAAGCGTCAAAGAATATCCAACTCTGGAAGCAGCGATTTATCGAACTTCGTATTACCTAATTTCAATTGTGAAATAGGAAATATATCAGGAATTTCAAACGGAGATAGTCGGGAACTTTCTCAGGAGATAAAAAAGTTTTTTTCACACACTGAAAACATAAACATACATCTTGATCAACTAGATATTGATGAATATATAGCACACTTGAACACTCATGAGACTTTGGTAACCGATGGTCCATCATCTAAACAATATGAAAATGATATGATGTTTCCTAAAAATATACTTATGGAAGCTAAGAGATTAATGAAATCAGATCCAAAAAATAGTCAATCACATATACGTAAGCTACTTAAAGATCGCTCTACTTTTGGAGATTCCCCATTGCACGCAGCACTTCGGTACGGTCAACGTGACGTTGTCAAGTACATGTTAATGTTGATAAGCTCTGATAAGGATTGCAAGATACTTGTCAATGAACAGAATAGTTCTGGCAAAACGCCGCTGCATTATGCAGTTCTACAAAATCTTCCAGAAAGTATAGAAGCATTACTCATGCTTGGAGCTGATCCAAACCGATCAGATGAACAGGGATGTTGTCCATTACACATTGCTGTGAAAAATCCTCAAGCTGGAGCTTGTGTGAGAACTTTATTATCGGATAAAAGAACTAAAATGGAAATACATAATGATGCTGGATGGACACCATTGCAACTTGCAGCAGCAGCTGGTTCATACTATGCAGTATGTTTACTTGTTGAAGCTGGGGTAAATGTAAATAGTACCGATATGTCATATGGTCGAACGGCATTACACATTGCTGTAGACGGCGGACACAAAGAAATCGTTACATATTTATTGAAAAAGACAAGCATTGCCATAAACAAAAGAAACTTCAGCGGAAATACTGCTTTACACTCAGCAGTTGTATATTCTGGTGTAAGAGCGAAAGAGTTGTGTGCATTGTTAATCAAATATGGAGCAGATCCGCACATTCAAAATCATAACAGAGAAACAAGCGATGATGAAAGGAAGATGACCACACACGTAAAGGAAGAAGTTAACTCCGACAATGAAAACTCTGATGAACTGAATGGACAATCGTCGTTTGATTTGGCGATGAATAAACCAGATATTTTGCAACTTCTTAACGGTCAAATTGATGAAGCACCAAGTGAAATGTCTTCCATTTCCACTAAACAAGAAGTACAAGATGAGGACTCGCAGAAGGAGTTGTTAAGCAATGAGCAGAAACAACAATTGTCCGACATTCTTGATAAAACACAAGGTTGGAGAAAACTTGCCAAACATTTGAAATTTGAATACTTCTTGAGGACATTACAACATACTTCGTTGAGCCCATCGCTACTCTTATTAAATTACATAGACGTTCAAACATTGATGTCCCTAACCGACCTGGAAAAGGCATTAAGAGATATTGATGAGACCAAAGCGGCGAATTACATTAATGGAATATCAATTGTACACAAGCAATCTTAA
Protein Sequence
MPEVFENYAVYKSATENLDYISHGHDMLMMNGQDAFSPFNGSQGTSAASPFSTSLSPLYNMDVSLGSFKDVTVIGEPYLTIVEQPIEKFRFRYKSEMIGTHGSLVGANTGSGRNKHFPAVQLHNYPASAKIQCTLVTSGEGKRIPHAHRLVRRVNGEDCDDPHIIDVTPENNFVATFHGMGIIHTAKKYVREELIKKMRHEAIEKKKRECRSDTLTTREEAQIKHDADIYQKCVNLNSVALCFQAFALDECNIMRPIQNCIVYSKPINNLKSALTGELKICRIDKHTSSVDGGEEVFLLVEKVGKKNIKVRFFEVNEDNFEVWSDYGRFSELDVHHQYAIVFRTPQYKDLTITSSKEVFLQLERPTDGDCSEPVKFTYKPSDRIIGKKRQRISNSGSSDLSNFVLPNFNCEIGNISGISNGDSRELSQEIKKFFSHTENINIHLDQLDIDEYIAHLNTHETLVTDGPSSKQYENDMMFPKNILMEAKRLMKSDPKNSQSHIRKLLKDRSTFGDSPLHAALRYGQRDVVKYMLMLISSDKDCKILVNEQNSSGKTPLHYAVLQNLPESIEALLMLGADPNRSDEQGCCPLHIAVKNPQAGACVRTLLSDKRTKMEIHNDAGWTPLQLAAAAGSYYAVCLLVEAGVNVNSTDMSYGRTALHIAVDGGHKEIVTYLLKKTSIAINKRNFSGNTALHSAVVYSGVRAKELCALLIKYGADPHIQNHNRETSDDERKMTTHVKEEVNSDNENSDELNGQSSFDLAMNKPDILQLLNGQIDEAPSEMSSISTKQEVQDEDSQKELLSNEQKQQLSDILDKTQGWRKLAKHLKFEYFLRTLQHTSLSPSLLLLNYIDVQTLMSLTDLEKALRDIDETKAANYINGISIVHKQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00763019;
90% Identity
iTF_00861665;
80% Identity
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