Basic Information

Insect: Lasioglossum marginatum
Gene Symbol: PAXBP1_1
Assembly: GCA_028455795.1
Location: CM052275.1:4783116-4791590[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-29 1.9e-25 90.2 2.7 1 272 543 753 543 755 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-29	1.9e-25	90.2	2.7	1	272	543	753	543	755	0.92

Sequence Information

Coding Sequence: ATGTTAGGGACAATGTCATTATTCAATAAACCGAAAAGGAATATCCGTCGTCGACATTTCAACGACGATGACGAAGATAATGAAAACAGGATGGAAGTTGAGGATGCACAACCAGTCAAATCTAAAACAAAGAAGAAGGATAAGCCGAAGCAGACGCTCCTTAGTTTTGGAGAGGAGCTGGAAGAAGCGGATGATGGTGAAGTCTTCAAAGTGAAAAAATCATCACGGAGCAAAAAATTGATGAAACAGCTAGATCACGAGAGGAGAAAAAAGAAAGGTGAAGAGAAAATGCAAGTGGACTCTGAGCAAGCAAACATGTCCATTAAACAGGAAAATGATTTAGAAATAAAGACAGATGATCTAGTAGTTAAAATAAAAAATACAGGACCTTTAATCTTAAATGGACGAGCTGCGCTGGCAGCTGGAAAAGATGACTATATGTCGGATGAAGAAGATGATAAACTACATGGTCATAAATTCATTAGAAATACAGACAAAGCTGACACAATGAAAATTCTTCTTGAAAGTGGTTGTATACCTGATGCGGCAATGATTCATGCAGCTAGAAAGCGTAGACAGAAGGCAAGAGAGCTGGGGACTGATTACATTCCTATAGAAGAGCAAAGCGATGATAAGGGGAAGTCAAGACTTATTAGGGAAGAAGATCATGACAGAAGTGATGACGATGATTCTCAAGATCGTATTGATATGACTGTTAATACTGAAGCTCGAGATAAAGAAAAAAGAAGAGAAGCATTTCTTGCATCACAAGCACCAATAAAACTTTCGGACGACGAAAGCGAACATGAAATTGAGGAAGAAGAATGGGAAGCTCAGCAAATAAGGAAAGGTGTAACAGGCGCACAGATTGCAGCGGTACAACAGGATTCCATGATGCAGCAGCAGTTCTCACTGGGTATGAATGTGAATCAGATAATGGGAAGTGGGGTACCTTTAGAAATGGTAATGCCAGCTCCACCACCTCCGCCAACAATTCAGCCACCAGATCCAACAAAAATAGTACCAGTTACTCCTCAGGAAGTTGTCAATAAGATACGTGCAAGATTGGAGAGTTTAAAAGAAGTACATCGGCGTCACCGATCAGATCTGGACCATTTAGAACAAGAATTAGGACAAACTAGTAAAGAACTGGACGATGGCGAAATTCGCGCACCGCAGCTTGCACAGCGCTTCACATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTGGTTGTTGGATTGGAGCAACGTTGGTTAGATCTTTATAGTGAACGCGCGACTGAACTAATGGAGAGAAGGCGGCAAGACACAAGAGATCAAGCGGAAGAAATTACAACAGCTGCAAGAGGCCAGCCTATGCGGAGGGGACCAGAAGTTGAAGCTCGTAATCGTCGAGCAACTGAAAGAGAAGGTAGAAGAGCTCGTCGAAGAAGAGCTAGAGAATTAGCTTCTACATTGCCGAAACATATTGACGGAATGTCTAGTGACGATGAAGTTACAGAACAGCAAAATCTTGCTTTTAAACAAACGAAAGACGAAATCGACAATGAAAGCAAAGAGATTTTCCATGATGTAAGGGACGAGTACTGTACCTTACGAGGAATACTATCGAAGTTGGAATCTTGGAGAGAAAGAGATAGAGATGCTTACAAGGAGGCTTACGTTTCTTTATGTATACCTAAAGCCATATCTCCTATTATTAGATGGCAATTGCTCACATGGAATCCAATTATGGAAAGCGCCGATATAGAAAGAACAAAGTGGTACAACACATTGTTGTTATATGCACTAGATAATAAAGAAACCGAAGAATCGCTTAAAAGGGATCCGGATGTTAGATTAGTACCATCAACAGTGGAAAAAATTGTCTTACCTAAATTAACATCTATAGTTGAAAAAATATGGGATCCCATGTCTACGTCACAAACATTACGACTCGTCGGCACAGTAAATCGTCTTATCAGAGAGTATCCTAATTTAAACGACACAAGTAAACAATTAGAAGCATTATTTAATGCTATATTAGAAAAAATTAAAGCAGCAGTGGAGAATGATGTTTTTATACCAATTTTTCCAAAACAAGTTTTGGATACCAAACACCAATTCTTCCAAAGGCAATTTTCAATGGCTGTTAAACTTTTGAGGAATTTACTGAGTTGGCAAGGTCTTCTCGGCGACACACAATTAAAAAATCTGGCGCTTGGCTCGTTGTTAAATAGATATCTTTTGGCTGGTTTGAGAGTTTCTGTTCCAACTGATGCTTTATTTAAGGCAAATATGGTAATGAGTACATTGCCTCGCGCATGGTTGCAAGGTGAAACAATAGAACACCTGAGAATGTTCGCTACCCTTATTCAACAGCTTAGTGAACAATTAGATCAAGCCAATCCAGCGCATAACGAAGCCTGGGAATACTCGAAGTCCATCCTGAAAATAATCAAGCCTTTGTAA
Protein Sequence: MLGTMSLFNKPKRNIRRRHFNDDDEDNENRMEVEDAQPVKSKTKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERRKKKGEEKMQVDSEQANMSIKQENDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDYMSDEEDDKLHGHKFIRNTDKADTMKILLESGCIPDAAMIHAARKRRQKARELGTDYIPIEEQSDDKGKSRLIREEDHDRSDDDDSQDRIDMTVNTEARDKEKRREAFLASQAPIKLSDDESEHEIEEEEWEAQQIRKGVTGAQIAAVQQDSMMQQQFSLGMNVNQIMGSGVPLEMVMPAPPPPPTIQPPDPTKIVPVTPQEVVNKIRARLESLKEVHRRHRSDLDHLEQELGQTSKELDDGEIRAPQLAQRFTYYQELRGYVTDLVECLDEKLPLVVGLEQRWLDLYSERATELMERRRQDTRDQAEEITTAARGQPMRRGPEVEARNRRATEREGRRARRRRARELASTLPKHIDGMSSDDEVTEQQNLAFKQTKDEIDNESKEIFHDVRDEYCTLRGILSKLESWRERDRDAYKEAYVSLCIPKAISPIIRWQLLTWNPIMESADIERTKWYNTLLLYALDNKETEESLKRDPDVRLVPSTVEKIVLPKLTSIVEKIWDPMSTSQTLRLVGTVNRLIREYPNLNDTSKQLEALFNAILEKIKAAVENDVFIPIFPKQVLDTKHQFFQRQFSMAVKLLRNLLSWQGLLGDTQLKNLALGSLLNRYLLAGLRVSVPTDALFKANMVMSTLPRAWLQGETIEHLRMFATLIQQLSEQLDQANPAHNEAWEYSKSILKIIKPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123058;
90% Identity: iTF_00861872;
80% Identity: -