Lmar015002.1
Basic Information
- Insect
- Lasioglossum marginatum
- Gene Symbol
- ARID5B
- Assembly
- GCA_028455795.1
- Location
- CM052245.1:17613724-17619585[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-24 1.4e-20 73.6 0.0 1 89 85 171 85 171 0.95
Sequence Information
- Coding Sequence
- ATGACAATTGTAATGAGAATTAGGGAAAACAAGATTGTATACTTCAAAGTGATCGCGCCAAAATTGAAAGGACGTCCTAGGAGGAAGCGTAAAAAACGCAGCGCATCGCCAGGGGAGTCGAGCAATGAAAGCGAGGCATCGGTGGCGTCGACGTCGAAGAGTGTGACGTCGACGGGCGCCGGGAGCGTGATCTCGAACGTCGGGAGGCCTCCATCGTCAGTGGTACGTCGGAGCGAGAGGAACACCAGCGCGGAAGAGAAGAAGTTTCTCCAAGACGTGCAGAATTTCATGAACTCGAGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTTTTCCCGTTTTATACGAAAGTTCAAATGCTCGGCGGCTACGACACCGTCAGCGCCGGACGATTGTGGAAAACGATCTACGACGACATCGGGGGCAACACAGGGTCCACCAGTGCCGCCACCATTACTCGTCGACATTACGAAAGGTTACTGTTACCTTACGAGAGGTACCAAAGGGGCGAGGAAGCAAAAGTGAGACTGAACCATGGAAGACGAACCAAATCTAGTAGCGTCTCCGACGAGTCTGAAGAAATCAAGCAAGAAACCAATGATCCGTACCCTTCGGAAACGCCGCCGCCTGTAGAAACGAGTCTTACCACTACTACTCCCCCGTTACAGCCAATTATAACGACGGCGCCGTTCCTGCCAGGCGAGAAGCCGAAAACGGAGACGGGGAAAACGTCGTCGTTGCGTAGCGTGCGGGTGAAGCCCGAGCGGCTGAAGTCGTTGAACACGATGATCGCGAATAGCACGCCGTCTCCTAGCCAGCAAGCCAGCCAACTGCCAAGCCCGCCGCCCTCGTCGAATACGTCGATCTCGACGCCGAGTAGTACGCCATCGACGACACCGACGAACGTTGCGGCGAACGGGAACAGCCAGAGTGTGTTGGAGAGACAGCTGAACAGCCCGTTGATATCTCAACAGGTTCCACCGTCGTGTTCGCCGCCGGGGCTTCCGGTGACCACGGTGGCAACGAACGCCACCACGGTGGTCACGTTGACGCCTCCGCCGGAGAAAGATATGAAGGAGATTAAGCTAGATCCGAAGCAGACGTCCCTGCTGGCCCAGGGCAAGGAGAACATACCTCTGTTCGGGGAGAAGCCAATGTTCGGGGAGAAGGCGATCGTGCCGCCCCGATCGCCGGAAGTGATCGATCTCGAGTCGGAGAGCGACACCAGCAGGGACAAGATCATCATTCCCAGCTTCAAGAAGCGCAAGCTCGAGATCCTTCGCGAGGGAGGTCTCGAGGTCACTGCCGTGGATCTGGACACCCGGCCGAGCGTGATCCAAAGCAATCCGCCGGCGCCTGCCACCATGAAGACCGAGGAGAAATCGCCGATCTCATACCCGTTGCCGGTCACGCCGAACTCCATTCCGAAGCTGATCTCCGTGACCGTCACGCCGGACATCGGCCACATGCTGTCGCCGCAAGATCACCAGCATCCTCATCACCAGGCGAGGCTCCAGGTGCCCACCAAGCAACCGCCTGCTCACCATAACAATAACAACACCACCACCGTGAACAACAACAACATGGTGAACAGCCGTGTGATCAACCTCGGTACGTCCAACAACGCGGCGTTGTTGCAGCTGTACGCGAATGCCAATGTCCCGCCACCGGCCTCGGCCATCCATCATCAAGCAAACCACCGGTTCATGCCACCATCGGTTCCCAATGGCAGGATATTCCCGCCAAAGGTGACGCAGTCGAGGTCGATATTCGCGCACAACGAAAAGACGGTTTACGGGGACCCGAAAGACATTCTCGTTCCTCCAAAGTATCGGCCCACGCATCATCGTTTGCAACCGCCGCTGCACCATCACTACCACAACCACCACCATCACAACTATAGCCACAATCACCACCATCATCACCACGGCCCGGTGAACAACAACAACGAGATGGTGGCGCACGGCGGCGTTCTCGACCTGACGCAAAAGTCCTCCCCCGAGAAGCCGGTGTTCCCGCGGCCGAGCCTAGAAATAGTTAAAGTACCTGTAGTGCCGAGGCCTAATCCACTGAACCTGGAGATGAGGAACTCGTCCACGATCAAAGAGAAGCCGACGGACTGCTCGAAACGTGGTCCGCCAAGTGGTGGCGGCGGCTATCCCGGCTATCAGAACGTGCTGGACAGTCGAACGATGGCGTCGAACAATCTGGAAATCACGATCGTCAATCCGAAACACAAGACTAATCACCTGAGTCCGCCCGTGCGGGTGCCAAGTCCACCGAATCGGAACCATACTCTACCAGGACAGAGAAGGCACCAGGCGAACGGGAAATACACGACGAGGAGCGAACCGGTTTCACCGTACACACCTAGGAAGCCAAGTAGTCACCCCGTGATACCGAACGTACCTAATCTGAACCATTTGAACAGCGGGAACAACCCTAGAATGCAGGCAGCGATGCACCAGCAGATTAGTATAGACAGGAGAAAAAACGTGGAGACTGGAGGTCAAGATATacatcatcagcagcagcaacaacaacaacagcagtatcatcaacagcgtcggatcagcgaaggcgataagtcgttgatcgctcagcagcagcagcagcaacatcaacagcagcaacagcaacaagaagccaggcaaaacgaagctgggaggcggcacagcgtacccagcatatcctcaGGTTTCGTGCCCCAGGTGCCGCAAAGCAATCCAGCCTTCCTCCCGCAACTGCCAACGAACACGCCCGGCAAGTTCCTACCAATTTTGGACCCGATGTACTATTCCGCGTTCTACAACGGTCTGTTCCCGCCGCCGATTCCGCCCACGGCCCCTGCGTCCTTTCTGCCGCCGGAGTTCAGCGCTTATTACAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGGGATGGCGGGGCAGCACCAGCCGGCTGCCCCAACGTCTAAGTAG
- Protein Sequence
- MTIVMRIRENKIVYFKVIAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSVTSTGAGSVISNVGRPPSSVVRRSERNTSAEEKKFLQDVQNFMNSRGTPVGKMPLLGYRQIDLFPFYTKVQMLGGYDTVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLNHGRRTKSSSVSDESEEIKQETNDPYPSETPPPVETSLTTTTPPLQPIITTAPFLPGEKPKTETGKTSSLRSVRVKPERLKSLNTMIANSTPSPSQQASQLPSPPPSSNTSISTPSSTPSTTPTNVAANGNSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVATNATTVVTLTPPPEKDMKEIKLDPKQTSLLAQGKENIPLFGEKPMFGEKAIVPPRSPEVIDLESESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKTEEKSPISYPLPVTPNSIPKLISVTVTPDIGHMLSPQDHQHPHHQARLQVPTKQPPAHHNNNNTTTVNNNNMVNSRVINLGTSNNAALLQLYANANVPPPASAIHHQANHRFMPPSVPNGRIFPPKVTQSRSIFAHNEKTVYGDPKDILVPPKYRPTHHRLQPPLHHHYHNHHHHNYSHNHHHHHHGPVNNNNEMVAHGGVLDLTQKSSPEKPVFPRPSLEIVKVPVVPRPNPLNLEMRNSSTIKEKPTDCSKRGPPSGGGGYPGYQNVLDSRTMASNNLEITIVNPKHKTNHLSPPVRVPSPPNRNHTLPGQRRHQANGKYTTRSEPVSPYTPRKPSSHPVIPNVPNLNHLNSGNNPRMQAAMHQQISIDRRKNVETGGQDIHHQQQQQQQQQYHQQRRISEGDKSLIAQQQQQQHQQQQQQQEARQNEAGRRHSVPSISSGFVPQVPQSNPAFLPQLPTNTPGKFLPILDPMYYSAFYNGLFPPPIPPTAPASFLPPEFSAYYKELLASSQPRLGMAGQHQPAAPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763029;
- 90% Identity
- iTF_00865798; iTF_00866496; iTF_00861676; iTF_00862355; iTF_00763029; iTF_00863065; iTF_00762341; iTF_00864427; iTF_00860173; iTF_00860916;
- 80% Identity
- -