Basic Information

Gene Symbol
ARID5B
Assembly
GCA_028454225.1
Location
CM052211.1:1417312-1426819[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-24 1.3e-20 73.6 0.0 2 89 307 392 306 392 0.95

Sequence Information

Coding Sequence
ATGTACGAAGAAACAACGTCGAAGATCATGGCAGATGAAACGCTATTACCTGCAGGTCGAAGAGGTTACAGCGTGGAGATTCGTGGGGTTTGGCGTAGACAAGCGTGCCCTATTCGAGCCCCGAAATCCCACAAATCAGCGGGTCCAAGTGGCGGGTCGAAACTTTGTGAAAATGACGTCGCCGCTGGCATCAGCGGACAATTAAATTATCGTCGGAGCCGAGTAGATAACGATGCACTCGAGGACGAGGTGCTGACGATATCGGAGAAGGTGGTGGTCCGGGTTCACGACCTCGTCACGTGGCTGTCGCCGGCGTTGGAGTGGTCATGGGGTCGGGAAGTCTCTTACCCGCCGACCCCTACCTCGTCCCCGGAGAGCAGCCCATTGAGGTACGAGATACCGCAGCCCCAGGTGCTCACCGACCCCGGCATCGATTTTTCCGACGTCGATAAGCAGCAGAAGGAGTACGAGACCTACCACAACACCAGGAGGACCGAGTACGGCGCGCAGACCAAGGTGGTCGTCCTCTCGTACCCTAGGTACTGTCGGTACCGGGCCCTGTTGCGAAGGCTCGAAGGGGCCGAACCTGCTTGGCTATGCTCCTCCGTCGCCGCAGCCTTGGGAGGATTCATGGCCACACCGGGCACCAGGGTACTCTTCTGCAGGGACACCTTCGACTATCCGGACCTTGAAACGCACGAGCTGCTCTGCAACCATCTGGCGCCGAAATTGAAAGGACGACCAAGGAGGAAGCGTAAAAAGCGCAGCGCGTCGCCGGGCGAGTCGAGCAATGAGAGCGAGGCGTCGGTGGCGTCGACGTCGAAGAGCGCGACGTCGACGGGCGCCGGGAGCCTGATCTCGAACGTCGGAAGGCCTCCGTCGTCGGTGGTACGTCGGAGCGAGAGGAACACCAGCGCGGAGGAGAAGTTTCTCCAAGACGTGCAGAATTTCATGAACTCGAGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTTTTCCCGTTTTATACGAAAGTTCAAATGCTCGGCGGCTACGACACCGTCAGCGCCGGACGATTGTGGAAAACGATCTACGACGACATCGGGGGCAACACGGGGTCCACAAGCGCCGCCACCATCACTCGTCGACATTACGAAAGGTTACTGTTACCTTACGAGAGGTATCAGAGAGGCGAGGAAGCAAAAGTGAGACTGAACCACGGAAGACGAACTAAATCTACCAGCGTCTCCGACGAGTCTGAAGAAATCAAGCAAGAAACCAATGATCCGTACCCTTCGGAAACGCCGCCGCCTGTAGAAACGAGTCTTACCGCTACTACTCCCCCGTTACAGCCAATTATAACGACAGCGCCGTTCCTGCCAGGCGAGAAGCCGAAGACGGAGACGGGGAAAACGTCGTCGTTGCGTAGCGTGCGGGTGAAGCCCGAGCGGCTGAAGTCGTTGAACACGATGATCGCGAACAGCGCGCCGTCTCCTAGCCAGCAAGCCAGCCAACTGCCAAGTCCGCCGCCCTCGTCGAACGCGTCGATCTCGACGCCGAGCAGTACGCCGTCGACGACACCGACGAACGTCGCGACGAACGGGAACAGCCAGAGCGTGTTGGAGAGGCAGCTGAACAGCCCGTTGATATCGCAACAGGTACCACCGTCGTGTTCGCCGCCGGGGCTTCCGGTGACCACGGTGGCAACGAACGCCACCACGGTGGTCACGTTGACGCCACCGCCGGAGAAAGACATGAAGGAGATCAAGCTAGATCCGAAGCAGACGACCCTGCTGGCCCAGGGGAAAGAGAACATACCTCTGTTCGGCGAGAAGCCGATGTTCGGGGAGAAGGCGATCGTGCCGCCCCGATCGCCGGAAGTGATCGACCTCGAGTCGGAGAGCGACACCAGCAGGGACAAGATCATCATTCCCAGCTTCAAGAAGCGCAAGCTCGAGATCCTCCGGGAGGGAGGTCTCGAGGTCACTGCCGTCGACCTGGACACCCGGCCGAGCGTGATCCAGAGCAACCCGCCGGCGGCGCCTGCCACCATGAAGACCGAGGAGAAGCCGCCGATCTCGTACCCGTTGCCGGTCACGCCGAACTCCATTCCGAAGCTGATCTCCGTGACCGTCACGCCGGACATCGGCCACATGCTGTCGTCGCCGCAAGACCACCAGCACCCCCATCACCAGGCGAGGCTCCAAGTGCCCGCCAAGCAACCGCCTGCCCACCATAACAACAACAACAACACCACCACCGTGAACAACAACAACACGGTGAACAGTCGCGTGATCAACCTCGGCACGTCCAACAACGCGGCGTTGTTGCAGCTGTACGCGAACGCCAATGTCCCGCCGCCGGCCTCGGCCATCCATCATCAAGCCAACCACCGGTTCGTGCCACCGTCGGTGCCCAACGGCAGGATATTCCCGCCAAAGGTGACGCAGTCGAGGTCGATATTCGCGCACAACGAAAAGATGGTTTACGGGGACCCGAAAGACATTCTCATCCCTCCAAAGTATCGGCCCACGCTGCACCGTTTGCAaccgccgtcgcaccatcactaccacaaccaccatcatcacaaccatagccacaaccaccatcatcatcaccacggcccggtgaACAACAACAACGAGATGGTGGCGCACGGCGGCGTTCTCGACCTGACGCAAAAGTCCTCCCCCGAGAAGCCGGTGTTCCCGCGGCCGAGCCTAGAAATAGTTAAAGTACCTGTAGTGCCGAGGCCTAATCCACTGAACCTGGAGATGAGGAACTCGTCCACGATCAAAGAGAAGCCGACGGACTGCTCGAAACGCGGTCCGTCCGGTGGCGGCGGCGGCGGCGGCGTCGGCGTCGGCGGTTATCCCGGCTACCAGAACGTGCTGGACAGCCGAACGATGGCGTCGAACAATTTGGAGATCACGATCGTCAATCCGAAACACAAGAGCAACCACCTGAGCCCGCCCGTGCGGGTGCCGAGTCCACCGAATCGGAACCACACCGTACCAGGACAGAGAAGGCACCAGGCGAACGGGAAATACGCGACGAGGAGCGAGCCGGTTTCACCGTACACACCTAGGAAGCCGAGTAGTCATCCCGTGATACCGAACGTACCTAATCTGAACCACTTGAACAGCGGGAACTACCCTAGAATGCAggcagcgatgcaccagcagatcggtatagacaggagaaaaaacgtggagactgggagtaaagatatacatcagcaacaacaacaacagcaacagcagtatcatcaacaacgtcggatcagcgaaggcgacaagtcgttgatcgctcagcaacagcagcagcaacagcaacaacaacagcaacaagaagccaggcaaaacgaagctgggaggcggcacagcGTACCCAGCATACCCTCGGGTTTCGTGCCCCAGGTGCCGCAAACCAATCCAGCCTTCCTCCCGCAACTGCCAACGAACACGCCCGGCAAGTTCCTACCAATTTTGGACCCGATGTACTATTCCGCGTTCTACAACGGTCTGTTCCCGCCGCCGATTCCGCCCACGGCCCCCGCGTCCTTTCTGCCGCCGGAGTTCAGCGCGTATTACAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGGGATGACGGGGCAGCACCAGCCGGCTGCCCCAACGTCTAAGTAG
Protein Sequence
MYEETTSKIMADETLLPAGRRGYSVEIRGVWRRQACPIRAPKSHKSAGPSGGSKLCENDVAAGISGQLNYRRSRVDNDALEDEVLTISEKVVVRVHDLVTWLSPALEWSWGREVSYPPTPTSSPESSPLRYEIPQPQVLTDPGIDFSDVDKQQKEYETYHNTRRTEYGAQTKVVVLSYPRYCRYRALLRRLEGAEPAWLCSSVAAALGGFMATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSATSTGAGSLISNVGRPPSSVVRRSERNTSAEEKFLQDVQNFMNSRGTPVGKMPLLGYRQIDLFPFYTKVQMLGGYDTVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLNHGRRTKSTSVSDESEEIKQETNDPYPSETPPPVETSLTATTPPLQPIITTAPFLPGEKPKTETGKTSSLRSVRVKPERLKSLNTMIANSAPSPSQQASQLPSPPPSSNASISTPSSTPSTTPTNVATNGNSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVATNATTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKPMFGEKAIVPPRSPEVIDLESESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAAPATMKTEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQDHQHPHHQARLQVPAKQPPAHHNNNNNTTTVNNNNTVNSRVINLGTSNNAALLQLYANANVPPPASAIHHQANHRFVPPSVPNGRIFPPKVTQSRSIFAHNEKMVYGDPKDILIPPKYRPTLHRLQPPSHHHYHNHHHHNHSHNHHHHHHGPVNNNNEMVAHGGVLDLTQKSSPEKPVFPRPSLEIVKVPVVPRPNPLNLEMRNSSTIKEKPTDCSKRGPSGGGGGGGVGVGGYPGYQNVLDSRTMASNNLEITIVNPKHKSNHLSPPVRVPSPPNRNHTVPGQRRHQANGKYATRSEPVSPYTPRKPSSHPVIPNVPNLNHLNSGNYPRMQAAMHQQIGIDRRKNVETGSKDIHQQQQQQQQQYHQQRRISEGDKSLIAQQQQQQQQQQQQQEARQNEAGRRHSVPSIPSGFVPQVPQTNPAFLPQLPTNTPGKFLPILDPMYYSAFYNGLFPPPIPPTAPASFLPPEFSAYYKELLASSQPRLGMTGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2