Lcal012111.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- Rel
- Assembly
- GCA_963966675.1
- Location
- OZ016543.1:14028645-14032856[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-40 9.3e-37 127.2 0.7 1 168 79 269 79 270 0.88 2 2 2.7 1.5e+04 -3.7 0.3 102 132 784 814 782 836 0.65
Sequence Information
- Coding Sequence
- ATGCCAGAGGTCTTTGAAAATTATGCGGTTTACAAAAGTGCAACCGAAAACCTGGATTATATTTCTCATGGACAtgATATGCTAATGATGAATGGTCAAGATGCGCTTAGTCCCTTCAACGGATCTCAAGGGACAAGTGCTGCATCACCTTTTTCGACATCTATGTCACCACTGTACAACATGGATGTGTCGCTGGGTAGTTTCAAAGATGTCACGgTTATCGGTGAACCATATCTTACAATCGTGGAGCAACCAATTGAAAAGTTTCGATTTCGATATAAATCAGAGATGATAGGAACACACGGAAGTTTAGTAGGATCAAATGCTGGAAGTGGTCGCAATAAAAATTTCCCAGCAGTTCAGTTACACAATTATCCTGGAAGTGCAAAAATACAATGTACATTAGTTACATCTGGTGAGGGTAAAAGGATACCTCATGCGCATAGATTGGTGCGTAGAGTAAATGGGGAAGATTGCGATGATCCCCATATAATTGATGTCACTCCAGAGAATAATTTTACTGCAACATTTCATGGGATGGGAATTATACACACAGCAAAGAAATATGTACGAGAGGAACTTATCAAAAAAATGCGATACGAAGcaatagaaaaaaagaaaagagaatgTAGAAGCGATACCCTTACTACTCGAGAAGAAGCTCAGATCAAACACGATGCAGATATTTATCAAAAATGTGTGAACCTAAATAGCGTTGCACTATGCTTTCAAGCATTCGCTTTGGATGAATGCAATATCATGAGACCAATACAAAACTGTATTGTTTATTCAAAACCTATTAATAATCTGAAAAGTGCATTAACTGGAGAACTGAAAATATGCAGAATTGACAAACACACTAGCAGCGTTGATGGagacgaagaagtttttctacTTGTCGAGAAAGTAGGAAAAAAAAACATCAAAGTCAGATTGTTTGAGGTAAATGAGGATAACTTTGAAGTCTGGAGTGACTATGGACGTTTCACGGAATTGGATGTACATCATCAATATGCAATTGTATTTCGAACACCGCGATACAAAGATCTTACTATTACATCCCCAAGGGAAGTATTCGTGCAACTAGAAAGGCCAACAGACGGTGACTGTTCCGAGCCAGTAAAATTTACTTACAAACCAAGCGATAGAATTATAGGAAAGAAGCGTCAAAGAATATCCAACTCTGGAAGTAGCGATTTATCGAACATCGTATTACCTAATTTTAATTGTGAAACAGGAAATATATCAGGAATTTCAAACGGAGATAGTCGGGAACTTTCTCGAGAAATAAGAAACTTTTTTTCACACACTGAAAACATAAACATACCTCTTGATCAACTAGATATTGAAgAATATATAGCACAGTTGAACACTCCCGAGAATTTGGCGACCGATGGCCCATCATCTCAACAGCATGACAATGATATGATGTTTCCTAGAAATATACTTTTGGAAGCTAAGAGATTAATGAAATCAGATCCAAAAAATAGTCAAACACATATACGTAAGCTACTTAAAGATCGCTCCACTTTTGGAGATTCCCCATTGCACGCAGCACTTCGGTACGGTCAACGTGACGTTGTCAAGTACATGTTAATGTTGATAAGCTCTGATAAGGATTGCAAGATACTTGTCAATGAACAGAATAGTTCTGGCAAAACGCCGCTGCATTATGCAGTTCTACAAAATCTTCCAGAAAGTATAGAAGCATTACTCATGCTTGGAGCTGATCCAAACCGATCAGATGAACAGGGATGTTGTCCATTACACATTGCTGCAAAAAATCCTCAAGCTGGAGCTTGTGTGAGAACTTTATTATCGGATAAAAGAACTAAAATGGAAATACATAATGATGCCGGATGGACACCATTGCAACTTGCAGCAGCAGCTGGTTCATACTATGCAGTATGTTTACTTGTTGAAGCCGGGGTAAATGTAAATAGTACCGATATGTCATATGGTCGAACTGCATTACACATTGCTGTAGACGGCGGACACAAAGAAATCGTCACATATTTATTGAAAAAGACAAACATTGCCATAAACAAAAGAAACTTCAGCGGAAATACTGCTTTACACTCAGCAGTTGTATATTCTGGTGTAAGAGCGAAAGAGTTGTGTGCATTGTTAATCAAATATGGAGCAGATCCACACATTCAAAATCATGACAGAGAATCAAGCGATGATGAAAGGAAGACACACGTAAAAGAAGAAGTTAACTCCGACAATGAAGACTCTGAAGAACTGAATGGACAATCGTCGTTTGATTTGGCGATGAATAAACCAGATATTTTGCAACTTCTTAATGGTCAAACCGATGAAGCACCAAGTGAAATTTCTTCCGTTTCCACTAAACAAGAAGTACAAGATGAGGACTCGCAGAAGGAGTTGTTAAACAATGAGCAGAAACAACAATTGTCCGATATTCTTGATAAAACACAAGGTTGGAGAAAACTTGCCAAACATTTGAAATTTGAATACTTTTTAAGGACATTACAACATACTTCGTTGAGCCCATCACTACTCTTATTAAATTACATAGACGTTCAGACATTGATGTCCCTAACTGACCTGGAAACAGCATTAAGAGATATTGATGAAACCAAAGCGGCAAATTACATTAATGGAATTTCAATTGAACACAAGCAATCTTAA
- Protein Sequence
- MPEVFENYAVYKSATENLDYISHGHDMLMMNGQDALSPFNGSQGTSAASPFSTSMSPLYNMDVSLGSFKDVTVIGEPYLTIVEQPIEKFRFRYKSEMIGTHGSLVGSNAGSGRNKNFPAVQLHNYPGSAKIQCTLVTSGEGKRIPHAHRLVRRVNGEDCDDPHIIDVTPENNFTATFHGMGIIHTAKKYVREELIKKMRYEAIEKKKRECRSDTLTTREEAQIKHDADIYQKCVNLNSVALCFQAFALDECNIMRPIQNCIVYSKPINNLKSALTGELKICRIDKHTSSVDGDEEVFLLVEKVGKKNIKVRLFEVNEDNFEVWSDYGRFTELDVHHQYAIVFRTPRYKDLTITSPREVFVQLERPTDGDCSEPVKFTYKPSDRIIGKKRQRISNSGSSDLSNIVLPNFNCETGNISGISNGDSRELSREIRNFFSHTENINIPLDQLDIEEYIAQLNTPENLATDGPSSQQHDNDMMFPRNILLEAKRLMKSDPKNSQTHIRKLLKDRSTFGDSPLHAALRYGQRDVVKYMLMLISSDKDCKILVNEQNSSGKTPLHYAVLQNLPESIEALLMLGADPNRSDEQGCCPLHIAAKNPQAGACVRTLLSDKRTKMEIHNDAGWTPLQLAAAAGSYYAVCLLVEAGVNVNSTDMSYGRTALHIAVDGGHKEIVTYLLKKTNIAINKRNFSGNTALHSAVVYSGVRAKELCALLIKYGADPHIQNHDRESSDDERKTHVKEEVNSDNEDSEELNGQSSFDLAMNKPDILQLLNGQTDEAPSEISSVSTKQEVQDEDSQKELLNNEQKQQLSDILDKTQGWRKLAKHLKFEYFLRTLQHTSLSPSLLLLNYIDVQTLMSLTDLETALRDIDETKAANYINGISIEHKQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763019;
- 90% Identity
- iTF_00861665;
- 80% Identity
- -