Basic Information

Insect: Lasioglossum albipes
Gene Symbol: znf423
Assembly: GCA_000346575.1
Location: KB639463.1:291481-300763[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.48 38 5.2 3.9 1 23 3 25 3 25 0.97

2 19 1e-06 8.3e-05 23.0 4.3 1 23 31 53 31 53 0.99

3 19 0.00022 0.018 15.6 0.2 1 23 59 81 59 81 0.99

4 19 0.00028 0.023 15.3 0.6 1 23 237 260 237 260 0.95

5 19 0.42 34 5.3 0.0 2 23 271 293 270 293 0.88

6 19 0.21 17 6.3 0.1 3 23 356 376 355 376 0.97

7 19 0.0029 0.23 12.1 0.3 1 23 388 410 388 410 0.97

8 19 0.014 1.1 10.0 0.3 1 23 419 442 419 442 0.92

9 19 3.7 3e+02 2.3 0.2 1 23 447 470 447 470 0.91

10 19 0.23 18 6.2 2.0 2 23 544 565 544 565 0.96

11 19 0.0022 0.18 12.5 0.2 1 23 570 593 570 594 0.95

12 19 3.3 2.7e+02 2.5 0.1 2 23 657 680 656 680 0.81

13 19 0.0002 0.016 15.8 1.0 2 23 696 718 695 718 0.96

14 19 0.042 3.3 8.5 1.0 1 23 727 750 727 750 0.93

15 19 0.0024 0.19 12.4 0.1 2 23 942 964 941 964 0.93

16 19 0.1 8.3 7.2 0.3 1 23 974 997 974 997 0.96

17 19 1.7 1.4e+02 3.4 1.3 2 23 1010 1031 1009 1031 0.95

18 19 0.48 38 5.2 0.1 2 23 1040 1062 1039 1062 0.93

19 19 0.11 8.5 7.2 3.0 1 23 1069 1092 1069 1092 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.48	38	5.2	3.9	1	23	3	25	3	25	0.97
2	19	1e-06	8.3e-05	23.0	4.3	1	23	31	53	31	53	0.99
3	19	0.00022	0.018	15.6	0.2	1	23	59	81	59	81	0.99
4	19	0.00028	0.023	15.3	0.6	1	23	237	260	237	260	0.95
5	19	0.42	34	5.3	0.0	2	23	271	293	270	293	0.88
6	19	0.21	17	6.3	0.1	3	23	356	376	355	376	0.97
7	19	0.0029	0.23	12.1	0.3	1	23	388	410	388	410	0.97
8	19	0.014	1.1	10.0	0.3	1	23	419	442	419	442	0.92
9	19	3.7	3e+02	2.3	0.2	1	23	447	470	447	470	0.91
10	19	0.23	18	6.2	2.0	2	23	544	565	544	565	0.96
11	19	0.0022	0.18	12.5	0.2	1	23	570	593	570	594	0.95
12	19	3.3	2.7e+02	2.5	0.1	2	23	657	680	656	680	0.81
13	19	0.0002	0.016	15.8	1.0	2	23	696	718	695	718	0.96
14	19	0.042	3.3	8.5	1.0	1	23	727	750	727	750	0.93
15	19	0.0024	0.19	12.4	0.1	2	23	942	964	941	964	0.93
16	19	0.1	8.3	7.2	0.3	1	23	974	997	974	997	0.96
17	19	1.7	1.4e+02	3.4	1.3	2	23	1010	1031	1009	1031	0.95
18	19	0.48	38	5.2	0.1	2	23	1040	1062	1039	1062	0.93
19	19	0.11	8.5	7.2	3.0	1	23	1069	1092	1069	1092	0.97

Sequence Information

Coding Sequence: ATGCCATATCGGTGCAGCTGGTGTGCCAGACTATTCAAACACAAACGCAGCAGAGATCGACACGTGAAGCTGCACACCGGAGATCGAAGATATCGATGCACGCACTGCGAGGCTGCTTTCTCCAGGAGCGACCACCTGAAGATCCACATGAAGACGCACGACACCCAGAAGCCGTACCAGTGCACAGCGTGTTCCCGCGGCTACAACACAGCAGCGGCGCTAACGTCGCACATGCAGTCGCACAAGAAGCACCACCACCAATCCCAAAACGCGACGAAGCTGCAGGACGTGGAGTACGGTCGTCGCAGCGTGTCCTCGCACAGCACATCCTCTCCGCCAGTTCCCAGTTCCCCGTCGCCCTCTTTGAACCTAGCTCTGAACCCTAGAACCGGATTAAAAAGCTCGCACGGCAGCGCGTCGAACACGCCGATCCTCAGTTCTCCTTTGAAGCTGGCCTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAGCAGCTGCAGATGCACGTGCACACGATGCACCAGGCGATTCTGAGCGGGGAGAGCGTGGCGGTGCCTCCGTCCCCCAGCAGGACTGCCGACCAAGCTGGTTATCAGCGCGAGAAGGGATCGTTGCGATCGGAAGGATCCTCGAAGGATCACCACGAGAGGAAGTACCAGGAGGACGCGGAGAGATCGACGGACAAGGATCAGTTCGAGAACGCGTTCACGTGTAACCAATGCACGATGAAGTTCTCCACGTTGGCCTCGTTGAGAGACCACCTGGTCTCGATCCACAGAACCGACGGATTCGGTTCGGCGCTGATGATGTGTCCTCTCTGCGGCATCCCCTGCGCTTCTGCCGCGGCGTACGCGGAGCACTATGTCCTGCAACACTGCGAGAATAGGAGATTGGGGCCCCTGGAGGGCGCAGAGTACGGGGACACGAAGATCAACGGAGGCTACAGCGACTCGAAGAGTTCTAGAGCCCAGAAGACTAGGGATTCGGTCTCGGAGCCGGCCGATCTGACCAGCAAACATTCCAGACCCACCGAGAGCAGCTACAATCCTGGCACCCTGCTCTGTGGACAGTGCGGAGCTGCTTTGAAGGACTTCGAGTCGTTCAGAGAACACCTGGCCAGGCATCTGCAGGCTGATCAGAGGAACGACGCGATGAGACACCCCTGTCCAAAATGCGAGGCTAGCTTCCAAGATAGGGAGGACATGCTGGCGCATCTCACCAAGCACTACCTAGGCCAGATCAGCAAGGAGTACGCGTGCGGAGCTTGCAAGAAGCTGTATCCCCATCCGGATCTACTGCAGAGGCACCTGCTCGACAGCCACGCGCATCATCTTTACAGATGCGCCTTGTGCAGGGACACGTTTGATTCCAGAGTCGCTATCCAAGTTCATTTCGCTGTGAAGCACAGTCAGGAGTGCAGGATCTATCGGTGCAACGCCTGCACCGTTCCGAACAATGAAAATTCGCCTGGGAACACGCCTGGCGAAGGTAGAAGCTTCTTCAGAAGCGAAGCGGAGATGGCGAATCATGTCAGGAGCGTTCATGCACCGTCCACGGTCTCGAACAGCAGCCCTGTGGCTAGGAGTCCTGCATCCACGCCTGGAGTCACCGGCAGTGCTGTACCCAGATGCGTTTTCTGCGGAATCTGTTGCAACTCGGAGCTGGAGCTACAGCTTCACCTGGCCAGCCACTCGACCAGCTTGTACAGGTGTCCTATTTGCAGAGAGGGCTTCGCTGTGGAGTTCTTGTTGGACAGGCATATGGCGCAGGCGCATCATTCCAGCGATCATCAGGCTGTCAGGAGCAGCTCCAGGGAGAACGGGAGGATCGCGAGACCCCCGAGGACACAGGATGAGCCGAAGTCCCAAAAGAGAGGTCGTTCTCCAGCTTCCAGCAACAACAACTCGCTGAACCAGCGCGACAACAACAACAAACGTCCGAATTACACCAGCACAGGATCCCAGCAGTGCGAGCTCTGCGAGAGAGGAGAGTTCGCGAACGAGGCGGAGCTTCAAGCGCACAAGAAGCTGGCTCACGCTCCCGCGAAGCTTCAGACCAAGTCGCTATCCAGTCTTAGCATGACCTGCGCTTATTGTGGGGAGGTGTGTCGCTCTAGGACCGAGCTAGAGTCTCACACGAGGATCCAGCACGCCTCGAACGAACCTGGGGGCAGGCACAAGTGCAACATCTGCGACGAGGTGTGTCCTTCTGGCGCTACCCTGGCCGAGCATAAGCTGCAGAAGCACTGCAAGATCCAGCTGAGCGACACCTGCGTCGTCTGTCGAGGGAACCTCGCCTCGGAAGCTCAGTTCCTCGAGCACGTGCAGAGACACAGTTTGGAGAACGTCGATCCTCAGCAGAGACTCGACGGCTCCCTTCCTCATCTTCCTGCCGCCTGCGTGGTCTGCAGGCAGACGTTGATCAGCGACCTGGAGTGTCGTCTCCACGCCAGGCATCATCTCAGATCGTCCACCAGCTCCCAGAGCACCGCGTCCAGTCCCAGCCCCAACCAGAAGAGCCAGAGTCCAGGGTGCTGTCTGTGTCTGAGAGATTATTCGGCCGACGACTTCGTCAGTCTGCCTCCCAGCCACATCACTGGCGGAGGACAGTCCCTAAGAGTCTGCAAGTCCTGCTACATCCGCCACTCCCAGGGTCTACCTATTTTAAATTCACCCTACGAACACGCTAGAGCGAAGAACGACAGGAGCTGGGCTCCCAGCAGCAAAGAGTCCCATTGGGACGGGTCCAGAGATAGATGGGATTCCGACAGAGTGTTCAAGGCTGAAGAGAGGACTGACGAGAACTTGACCGATAATAAAAGGTGTCAGGACTGCGGCGTGAAGTTCGAGGACCCTGAAGAGGTGGAGAAACACCGGCTCGCCGAGCACGAGAAACCTGCTGCTGGGTCCAACACTTACACCTGTATACAGTGCCAGATGTCGTTCCCATCAGAGGCGAAGATACAACAGCACGTCAGAAAAGAGCATCTAGAAGCTACAGGAAAAGCTTCAGTGGATGCACTGCGATGTCACCTGTGTCTCTACGAAGCCTGCAGCCCCCTGCAGTTGCAGAGTCACCTGATAGAGCATACTTTCGCCGGCTGCGCTGCTCTCAGCTGTTACATTTGCCAGTCCCTTTTCACCGCGCCGATCGGTCTTCAGAACCACATGCTGCAAGAACACGGTCTAGGTGCGCGGCCTTACGACTGCTCGAAGTGCACCTTGAAGTTCTTCTTCAGGGCCGAGCTGGATCACCATGTGCTGACGTTCCATCGTCCTGGAGAAATGTCTCCGCCCCATGAAACTGTGCAGAACGCAGAGGTGGTGAAAGCGACTGAAGTTGAAGAGCAGAATTGTGACGATGGGATCACAGTGAAGGAAGAGATGTTGCCAGACATTGGCGAAGAAGAGGAGGAGATCAACGTTGACGGGCAAATGGAACACGAAGAGGAGGAGAAGCAGGTAGAAATGAACCAGAACCTGAAGACCGAGGTGGACGAGGAGGCTGCTCTTCCTGAGAAGACGGAATCGTGA
Protein Sequence: MPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHHQSQNATKLQDVEYGRRSVSSHSTSSPPVPSSPSPSLNLALNPRTGLKSSHGSASNTPILSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGESVAVPPSPSRTADQAGYQREKGSLRSEGSSKDHHERKYQEDAERSTDKDQFENAFTCNQCTMKFSTLASLRDHLVSIHRTDGFGSALMMCPLCGIPCASAAAYAEHYVLQHCENRRLGPLEGAEYGDTKINGGYSDSKSSRAQKTRDSVSEPADLTSKHSRPTESSYNPGTLLCGQCGAALKDFESFREHLARHLQADQRNDAMRHPCPKCEASFQDREDMLAHLTKHYLGQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVPNNENSPGNTPGEGRSFFRSEAEMANHVRSVHAPSTVSNSSPVARSPASTPGVTGSAVPRCVFCGICCNSELELQLHLASHSTSLYRCPICREGFAVEFLLDRHMAQAHHSSDHQAVRSSSRENGRIARPPRTQDEPKSQKRGRSPASSNNNSLNQRDNNNKRPNYTSTGSQQCELCERGEFANEAELQAHKKLAHAPAKLQTKSLSSLSMTCAYCGEVCRSRTELESHTRIQHASNEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDTCVVCRGNLASEAQFLEHVQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLRSSTSSQSTASSPSPNQKSQSPGCCLCLRDYSADDFVSLPPSHITGGGQSLRVCKSCYIRHSQGLPILNSPYEHARAKNDRSWAPSSKESHWDGSRDRWDSDRVFKAEERTDENLTDNKRCQDCGVKFEDPEEVEKHRLAEHEKPAAGSNTYTCIQCQMSFPSEAKIQQHVRKEHLEATGKASVDALRCHLCLYEACSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEMSPPHETVQNAEVVKATEVEEQNCDDGITVKEEMLPDIGEEEEEINVDGQMEHEEEEKQVEMNQNLKTEVDEEAALPEKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_00762737;
80% Identity: -