Basic Information

Insect: Halictus quadricinctus
Gene Symbol: znf423
Assembly: GCA_028454245.1
Location: CM052127.1:1974091-1993423[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.9e-06 0.00072 20.0 1.5 1 23 91 113 91 113 0.98

2 20 0.5 41 5.0 3.9 1 23 119 141 119 141 0.97

3 20 1.1e-06 8.9e-05 22.8 4.3 1 23 147 169 147 169 0.99

4 20 0.00024 0.019 15.5 0.2 1 23 175 197 175 197 0.99

5 20 0.00048 0.039 14.5 0.5 1 23 354 377 354 377 0.95

6 20 0.45 36 5.2 0.0 2 23 388 410 387 410 0.88

7 20 0.22 18 6.2 0.1 3 23 473 493 472 493 0.97

8 20 0.0048 0.39 11.4 0.4 1 23 505 527 505 527 0.96

9 20 0.015 1.2 9.8 0.3 1 23 536 559 536 559 0.92

10 20 4 3.2e+02 2.2 0.2 1 23 564 587 564 587 0.91

11 20 0.24 20 6.0 2.0 2 23 661 682 661 682 0.96

12 20 0.0023 0.19 12.3 0.2 1 23 687 710 687 711 0.95

13 20 3.5 2.8e+02 2.4 0.1 2 23 774 797 773 797 0.81

14 20 0.00022 0.017 15.6 1.0 2 23 813 835 812 835 0.96

15 20 0.044 3.6 8.3 1.0 1 23 844 867 844 867 0.93

16 20 0.0013 0.1 13.2 0.1 2 23 1059 1081 1058 1081 0.93

17 20 0.11 8.9 7.1 0.3 1 23 1091 1114 1091 1114 0.96

18 20 1.8 1.5e+02 3.3 1.3 2 23 1127 1148 1126 1148 0.95

19 20 0.5 41 5.0 0.1 2 23 1157 1179 1156 1179 0.93

20 20 0.11 9.1 7.1 3.0 1 23 1186 1209 1186 1209 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.9e-06	0.00072	20.0	1.5	1	23	91	113	91	113	0.98
2	20	0.5	41	5.0	3.9	1	23	119	141	119	141	0.97
3	20	1.1e-06	8.9e-05	22.8	4.3	1	23	147	169	147	169	0.99
4	20	0.00024	0.019	15.5	0.2	1	23	175	197	175	197	0.99
5	20	0.00048	0.039	14.5	0.5	1	23	354	377	354	377	0.95
6	20	0.45	36	5.2	0.0	2	23	388	410	387	410	0.88
7	20	0.22	18	6.2	0.1	3	23	473	493	472	493	0.97
8	20	0.0048	0.39	11.4	0.4	1	23	505	527	505	527	0.96
9	20	0.015	1.2	9.8	0.3	1	23	536	559	536	559	0.92
10	20	4	3.2e+02	2.2	0.2	1	23	564	587	564	587	0.91
11	20	0.24	20	6.0	2.0	2	23	661	682	661	682	0.96
12	20	0.0023	0.19	12.3	0.2	1	23	687	710	687	711	0.95
13	20	3.5	2.8e+02	2.4	0.1	2	23	774	797	773	797	0.81
14	20	0.00022	0.017	15.6	1.0	2	23	813	835	812	835	0.96
15	20	0.044	3.6	8.3	1.0	1	23	844	867	844	867	0.93
16	20	0.0013	0.1	13.2	0.1	2	23	1059	1081	1058	1081	0.93
17	20	0.11	8.9	7.1	0.3	1	23	1091	1114	1091	1114	0.96
18	20	1.8	1.5e+02	3.3	1.3	2	23	1127	1148	1126	1148	0.95
19	20	0.5	41	5.0	0.1	2	23	1157	1179	1156	1179	0.93
20	20	0.11	9.1	7.1	3.0	1	23	1186	1209	1186	1209	0.97

Sequence Information

Coding Sequence: ATGCTGTTTAAGGGAAACAGCTCCAGGCTCGAGCTCCTGATCGGCAAGATACAGGCTCACAAGGAACCGACGCAGGACGAGCAGAAATCGAAAGAAGCACTCGGGACCGGAAGTTCGTCCTGGCACAGCGAGGATGGCGGGCCAAACTCGCGTCGAGGAGGAGAAACGCCGTCGTCCTGCGCGACTCCCACATCTGCTAGCTTCCCGTCGGAACCTGAAGTCGACGCTGACGTTGGCGTCAACGCCGACGGCAACAACGCTACCGCTCCTTATCCTTGTCAATTCTGCGATCGCACCTTTCCGAGGCTGAGCTACCTGAAGAAGCACGAACAGAGCCACGGCGATCAAATGCCGTATCGGTGCAGCTGGTGCGCCAGACTATTCAAACACAAACGCAGCCGAGATCGACACGTGAAGCTGCACACCGGAGATCGAAGATATCGATGCACGCACTGCGAGGCTGCTTTCTCCAGGAGCGACCATCTGAAGATCCACATGAAGACGCACGACACTCAGAAGCCGTACCAGTGCACAGCCTGCTCCCGCGGCTACAACACAGCAGCAGCGCTAACGTCGCACATGCAGTCTCACAAGAAGCACCACCATCAGTCCCAGGGCGCGACGAAGCTGCAGGACGTGGAGTACGGTCGTCGCAGCGTGTCCTCGCACAGCACATCCTCTCCGCCAGTTCCCAGTTCCCCGTCGCCCTCCTTGAACCTAGCTCTGAACCCTAGAACAGGATTGAAAAGCTCTCACGGCAGCGCGTCGAACACGCCGATCCTGAGCTCTCCTTTGAAGCTGGCCTGCATGTACTGCACGCGGGACTCGTTCAGTTGCATGCAGCAGCTGCAGATGCACGTACACACGATGCACCAGGCGATCCTGAGCGGCGAGAGCGTTGCTGCAGTCCCTCCGTCTCCCAGCAGGACCACCGATCAAGCCGGTTATCAGCGCGAGAAAGGATCGCTCCGATCAGAGGGATCCTCGAAGGATCATCACGAGAGGAAGTATCAGGAGGATGCGGAGAGATCGACGGACAAGGACCAGTTCGAAAACGCGTTCACGTGTAACCAATGCACGATGAAGTTCTCGACGTTGGCCTTGCTGAGGGACCACCTGGTCTCGATCCACAGAACTGACGGATTCGGCTCCGCGCTGATGATGTGTCCACTCTGCGGCATCCCCTGTGCCTCTGCCGCGGCCTACGCAGAGCATTATGTCCTCCAACACTGCGAGAATCGAAGATTAGGGCCTCTGGAGGGCACAGAGTACGGAGACGCGAAGATCAATGGGTCTTATGGAGACTCGAAGAGTTCTAGAAATCAGAAGGCTAGGGATTCGGTATCAGAGCCAGCTGATCTGACCAGCAAACATTCCAGACCCACCGAGAGCAGCTACAATCCCGGCACCCTGCTCTGCGGACAGTGCGGAGCTGCTTTGAAGGACTTCGAGTCGTTCAGAGAACACCTGGCCAGGCATCTCCAGGCTGATCACAGGAACGACTCGATGAGACACCCATGTCCAAAATGCGAAGCGAGCTTCCAAGATAGAGAGGACATGCTGGTGCATCTCACTAAGCATTATCTAGGCCAGATCAGCAAGGAGTACGCTTGCGGAGCTTGCAAGAAACTGTACCCTCATCCTGATCTACTGCAGAGGCACCTGCTCGACAGTCACGCGCATCACCTTTACAGATGCGCCTTGTGCAGGGACACTTTCGACTCCAGAGTCGCTATACAAGTTCATTTCGCTGTGAAGCATAGTCAGGAGTGCAGGATCTACCGGTGCAACGCCTGCACTGTTCCTAATAATGAAAACTCGCCTGGGAACTCGCCTGGCGAGGGCAGAAGCTACTTCAGAAGCGAGGCGGAGATGGCGAATCATGTCAGGAGCGTTCATGCACCGTCCACGATCTCGAACAGCAGTCCCGTCGCTAGGAGTCCCGCTTCTACACCTGGGGTTACTGGCAGCGCTGTACCAAGATGCGTTTTCTGCGGAATTTGTTGTAATTCCGAATTGGAGCTGCAACTGCACCTGGCCAGTCACTCGACTAGCTTGTACAGATGTCCCATTTGCAGAGAGGGCTTCGCCGTGGAGTTCTTGCTGGACAGACACATGGCCCAGGCGCATCATTCTAGCGACCATCAGGCTGTCAGGAGCAGCTCTAGGGAGAATGGGAGGATTGGGAGACCTTCGAGGACTCAGGATGAGCCAAAGTCCCAGAAAAGAGGTCGTTCCCCAGCTTCCAGCAACAACAACTCGCTGAACCAACGCGACAACAACAACAAACGTCCGAATTACACCAGTACAGGGTCCCAGCAGTGCGAGCTCTGCGAGAGGGGAGAGTTCGCGAACGAGGCTGAGCTTCAAGCGCACAAGAAACTGGCTCACGCACCCGCAAAGCTTCAGACGAAGTCTCTGTCCAGTCTGAGCATGACCTGCGCTTACTGTGGCGAGGTATGTCGTTCTAGAACCGAGCTAGAGTCTCACACGAGGATTCAGCACGCTTCAAACGAGCCTGGGGGCAGGCACAAGTGCAACATCTGTGACGAGGTATGTCCTTCTGGGGCTACCCTGGCCGAGCATAAGCTGCAGAAGCACTGCAAGATCCAGCTGAGCGACACCTGTGTCGTCTGCCGAGGCAACCTAGCCTCGGAAGCTCAGTTCCTCGAACACGTGCAGAGACACAGTCTGGAGAACGTCGATCCTCAGCAGAGACTCGACGGCTCCCTTCCTCATCTTCCTGCCGCGTGCGTGGTCTGCAGACAGACGTTGATCAGCGACCTGGAGTGTCGTCTTCACGCCAGGCATCATCTCAGATCGTCCACCAGCTCCCAAAGCACCGCGTCCAGTCCCAGCCCCAATCAGAAGAGCCAGAGTCCAGGGTGCTGTCTATGTCTGAGAGATTACTCGGCTGACGACTTCGTCAGCCTTCCACCCAGCCACATCACGGGCGGAGGACAGTCCCTCAGAGTCTGCAAGTCTTGCTACATCCGCCACTCTCAGGGTCTACCTATTCTAAATTCGCCCTACGAACATGCTAGAGCAAAGAACGACAGAAACTGGGCTCCCAGCAGCAAAGAGTCCCAGTGGGACGGGTCCAGAGATAGATGGGATTCCGAGAGGGTGTTCAAGGCTGAAGAGAGGACTGACGAGAACTTGACTGATAATAAAAGATGTCAGGACTGTGGCGTGAAGTTCGAAGATCCCGAGGAGATGGAGAAACACAGGCTCGCGGAGCACGAGAAGCCTGCTGCTGGCTCCAACACGTACACCTGTATACAATGCCAGATGTCGTTCCCGTCAGAGGCTAAGATACAACAGCACGTTAGAAAGGAGCATTTAGAAGCTACAGGGAAAGCTTCCGTGGATGCCCTGCGCTGTCACCTCTGTCTCTACGAAGCCTGCAGCCCCCTACAGCTGCAGAGTCACCTGATAGAGCACACTTTCGCCGGCTGTGCTGCTCTGAGTTGTTACATTTGTCAGTCCCTTTTCACCGCGCCGATCGGTCTTCAGAACCACATGCTCCAAGAACACGGTCTAGGTGCCCGGCCCTACGACTGCTCGAAGTGCACCTTGAAGTTCTTCTTCAGAGCCGAGCTGGATCACCATGTGCTGACGTTCCACCGTCCTGGAGAAATGTCTCCACCCCACGAAATTGTGCAGAACGCAGAAATAAAAGTGACAGAAGCTGAAGAGCAGAATTGCGACGATGGGATCACGGTGAAGGAGGAGATGTTGCCAGACGTTGGCGAAGAAGAGGAGGAGATCAACGTTGACGGGCAAATGGAACACGAGGAGCAGGAGGAGGAGAAGCAGGTAGAGATAAACCAGAACCTGAAAACCGAGGTGGACGAGGAGGCTGCTCATCCTGAGAAGACGGAATCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKEPTQDEQKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVGVNADGNNATAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHHQSQGATKLQDVEYGRRSVSSHSTSSPPVPSSPSPSLNLALNPRTGLKSSHGSASNTPILSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGESVAAVPPSPSRTTDQAGYQREKGSLRSEGSSKDHHERKYQEDAERSTDKDQFENAFTCNQCTMKFSTLALLRDHLVSIHRTDGFGSALMMCPLCGIPCASAAAYAEHYVLQHCENRRLGPLEGTEYGDAKINGSYGDSKSSRNQKARDSVSEPADLTSKHSRPTESSYNPGTLLCGQCGAALKDFESFREHLARHLQADHRNDSMRHPCPKCEASFQDREDMLVHLTKHYLGQISKEYACGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTVPNNENSPGNSPGEGRSYFRSEAEMANHVRSVHAPSTISNSSPVARSPASTPGVTGSAVPRCVFCGICCNSELELQLHLASHSTSLYRCPICREGFAVEFLLDRHMAQAHHSSDHQAVRSSSRENGRIGRPSRTQDEPKSQKRGRSPASSNNNSLNQRDNNNKRPNYTSTGSQQCELCERGEFANEAELQAHKKLAHAPAKLQTKSLSSLSMTCAYCGEVCRSRTELESHTRIQHASNEPGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDTCVVCRGNLASEAQFLEHVQRHSLENVDPQQRLDGSLPHLPAACVVCRQTLISDLECRLHARHHLRSSTSSQSTASSPSPNQKSQSPGCCLCLRDYSADDFVSLPPSHITGGGQSLRVCKSCYIRHSQGLPILNSPYEHARAKNDRNWAPSSKESQWDGSRDRWDSERVFKAEERTDENLTDNKRCQDCGVKFEDPEEMEKHRLAEHEKPAAGSNTYTCIQCQMSFPSEAKIQQHVRKEHLEATGKASVDALRCHLCLYEACSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHVLTFHRPGEMSPPHEIVQNAEIKVTEAEEQNCDDGITVKEEMLPDVGEEEEEINVDGQMEHEEQEEEKQVEINQNLKTEVDEEAAHPEKTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684951;
90% Identity: iTF_00861382; iTF_00864834; iTF_00860619; iTF_00863466; iTF_00763405; iTF_00866881; iTF_00864168; iTF_00862762; iTF_00862096; iTF_00866195;
80% Identity: -