Lsuf012486.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- -
- Assembly
- GCA_948098915.1
- Location
- OX402549.1:14026317-14033008[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.8 1.5e+02 4.0 0.4 1 23 54 77 54 77 0.95 2 20 0.94 81 4.9 4.3 1 23 84 107 84 107 0.97 3 20 5.3 4.6e+02 2.5 3.9 1 23 183 205 183 205 0.97 4 20 0.0021 0.18 13.2 1.0 2 23 211 232 210 232 0.97 5 20 2.6 2.2e+02 3.5 1.5 1 23 238 260 238 261 0.94 6 20 0.18 15 7.1 5.3 2 22 495 515 494 515 0.96 7 20 0.41 36 6.0 0.4 2 23 768 789 767 789 0.96 8 20 5.5 4.8e+02 2.5 0.6 3 23 865 885 863 885 0.95 9 20 0.042 3.6 9.1 0.5 1 23 893 915 893 915 0.97 10 20 0.2 17 7.0 3.4 1 23 953 975 953 975 0.95 11 20 0.00029 0.025 15.9 4.0 1 23 984 1006 984 1006 0.99 12 20 0.3 26 6.4 2.2 1 23 1087 1109 1087 1109 0.98 13 20 0.054 4.7 8.8 1.6 1 23 1165 1187 1165 1187 0.95 14 20 0.59 51 5.5 0.1 2 23 1194 1215 1193 1215 0.97 15 20 0.019 1.6 10.2 2.0 1 23 1285 1307 1285 1307 0.94 16 20 0.017 1.5 10.3 0.9 1 23 1313 1335 1313 1335 0.95 17 20 0.0081 0.7 11.4 2.6 1 23 1425 1447 1425 1447 0.97 18 20 0.0002 0.017 16.4 1.4 1 23 1453 1475 1453 1475 0.99 19 20 0.95 82 4.9 2.0 1 23 1564 1586 1564 1586 0.96 20 20 0.0041 0.35 12.3 1.5 2 23 1601 1622 1600 1622 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGGCGAGGTCACAACTATTGCGCGCCCGTTTGAAGGTCGCTTTTCTGTGGACGTCTCTTCGGAGGCTTCCTCGGATGCGACAGAAGAGTTTGAACTACCGCAGTGCAAGATAAGAAGGAACTATAATTGTGCGAAGTGCACTTATAATACACAAAATCCGCGCGCTTATCTTGTTCACACTAGAGACGTTCATTTCGGCAGATTTAAGATTTACGAGTGTCAGCATTGTATTTATGCCTCGAGACATCAGCAGAAGCTCTTGAGACATACGAAGATGGTTCACGGGACAACAACGACGCCGTCGGCTTCCACTGCAAAGTTAGAAACCGAAGCTACCGTTAATGAAAATGTAGTAGACAACATGGAAGACCTGTTAGAAGAGATAGAAGAATGTGACGACTCTCAGATGGAAATGGATGCAGACGAGCAACCAGAGCGAGCTGACGATGCAGACATGTACGTCGCTAGAAGTACCAGCTCGCGGTTGCCAAAAGGAAAAGGAAAGTTTTTTTCTTGCGACAAATGCAACTACGTCACCCACATAAAAGCTCGGTACACGAAGCACGTAAAGTACCACTCGATGCCGATGATCAAGTGCACTATGTGCGACTTCCGCACGCCTTACAAATGGAATCTGGATCGGCACATGAAGAACCACGGCGGAAACGGCAGTTTCGTGTGCTCGAAGTGCACCTTCACGGCGGACATCAAGCAGAGCCTGACGGTACACGAAATGAATCATCATACGCCACCCGTGGGCCAATCGGCAGCGAGTCGGCGTCGTAATCGGGTGGGAGCCAGCGACCTAGCGACCGCTGAGTCGGCAAACACGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGGTCCTCGCATTCTGTCTCGGACAACATGGGCTTGCGATATGCGGAGAGAGATATAGTAAGCTGTAACAGCGATTCCAATGATACTTCATCACAAGTCAGCCCAGAAGGGGATCTATCTATCCAAGATGCTTCTGGACAACATTCCCCGAACTCAGGAAATGAAGACAAGGTTAACAAGCAAAGCAAAAAAGCCCCCAGGCCTATCCCGCAGCTCATTCCTCTCAACACATCAACTCCCAATCAAAACAAGACCCCAGGCGAACCGCCAGCGAAGAAATTCAAAGAATCCTCGAGTTTAGATTTAGCGAACAAGTTTGAAAACTTGCCTGATGACATAACTTTAACACCGGTAAACAATACGCCAAAGGAACCTGTAGTCCGAAAGAAAAACGAGTCGTTCTTCGACAAGTTAAAAGAAAGGTTACTGACGGAAACAGGTGAGGAGGGCTCCCTGAAATGCAAAAGCTGCGGTTTCGAGAGTAAATGTCTGTCGGAACATTCTGTGCACGAAAAGAACTGCGCAGCTCAAGCTAGCCGTGTGATGATGAGCACTTCGCATCCCAGCATGGGCTCCACTCGCTGTCAAAACTGTAGACATCGCTGCAAATCTAGCGCAGATTTGCATGTGCACATGCGCACTTGCGGCAAGAAAGAGAACACAAAAACACCTACAATAACCAAACGCGATAACACTGAAGCTTCTACTTCAAGTTTTGATAAAGACGCAGAACCACACCCTATGGAGAACGTTGTTTTCGTATGGAACAACATAAACCAAGGCAGTAAATTTGAAAGACCTCTTGATATCAACATTAACGATGACTCAACAATGCCAGAGTCGCAAAGAAATGACGACGCTGAAATAGTTGACGAAAATGAGGGTATGAATTTATCACCCAACAGCTTGAGTCTCGGGAAAAACGTTTACAAATGCTCAGATTGCAAGTTCTGGGCAGCTACCGCTTCTAGATTCCATGTCCATATCGTGGGACATTTAAACAAGAAACCATTTGAATGCTCTTTATGCAAATACAAGTCGAATTGGCGATGGGATATTACTAAGCATATAAAATTGAAATCCGCACGAGACCCAGAGCACAATGACGCTAAAGTGCTGATGACAGACGAGACCGGCAGGCGAAACTACAGCAAATACAACAAATTCTTAGCTGTACCAGTTCTTAATGAAAATGGAGAAAATGAATTTCATTATATTGATCAAAACACCACGGGAGATGCCACGTTGGAGGTAGATGAACCACTGAATGATACCAATGAAATGATGAACACATCTTATGAAATGCAGCCACTTAATTTGCAGACGCAATTTGGTGATCTCAAGTACGGCTCTACGGAGAACGCTAATCAAGTAATGAGACCAAAAAAGACTATGTGGAAGTGCAAAAAGTGTAATTACAAAGACCCGTCGAAAGATGCGTTACTGGAGCACGTGAGGCAGCACTCCAAAGTTGACGCCGGTGGTCAGGAAGAAGCAAAGAAGATAGACGCGCCAGACCCGGCTGATCTTGCATACCGATGCGGCCACTGCAACCAATTGTCTAATTGGAAACATGTTATACAGAGACATTGCCGCTTGAAACACGACGGAATAATAAAAGTAATAACCACAGTGAAGCCAAAACCCGAGCCAGTATCAGCTTGCACCTCTGAAACCTTCAACGACTTCTGCACCAGGTGCCCGTTCAAGACAAACGACAAAAAAATACTCATTGCACATCTACAGCAGCATCAGCCGTCCTCACAATCTATTTTCAAGTGTTACTTTTGCCCATACTTCGTTAAAGACGAACAGGATTTGATAACGCATCTGTTGCTACACGGCATAACCGACCCCGAAGACTATATAGCAAAAGCAATGGGCTGTAAATCTCCCCTACCCGAGCAGATGGTTCACGAAACGGTGACCGCTGCCAGTGGTTCTGCTAAGCGCCACAAATGCCAGGAATGCCCTTACGAAACCAACAGCAAGTCTCAATACATGTACCACGAACAGTTTCATCGAACCACATCTGCGGAAACTCCTTACAAATGTCCCGAATGCAACTATAGCGTATCAAAGAGACATTTACTCCATCAACACTTGAGAGTACACGGAATTTTTGCAAGGAAAAACGAAACTGAAGCAGAACTAGAAGCGTCAACTACTAACCAAAAAGGTGATAAGTCGGATAGCTTTAGCGAAGAAATTCCTTTCGTATGGGTCTCAGCGAGAAATGAATTCCATAAAATGTACAAATGTCGCTATTGTTCGTACGTTAACTCTCAGAAATGTAAGATACCTAACCATGAAAAAATACATTGTCTTGGATTCGAAAATAGCGAAGTGATAATATACAAGTGTTTAGAATGTAAATTTACGTGTGATAATGCCGGAAGATTGGCAGAACATTCCAAGAAGCATGGTCTTCTGTACGGTCGCATTTACAGCACAGTCGAGGAAGACATTCCCGATGAAGATCAAATAACTAGGCTCCGTAGAGTTCTTGAACTGGAAAAGAGCACAGTGTGCGAAGATACGACATCGGAAGAAAACACACTAGTTGATTCCAACGAAATAAAAATACTTTATTTCTGTCAGAAATGCCCAGCCAGATATTTTACTGAAAGCGAACTTAAAATGCATGAAAAATTTCACGATCTAGCTAATGCAAATAAATGTAAGAACTGTGAATTTTCAGTCCCAGAAGAGAATGATCTAGTTGCCCACCTGTCTGTTCATTCAGATGAGCATCACATTAGGTCTAACATGCTTAAGTTCATTCACAACTCGCACTCTCTTTATAGAGAACCTCGATTGGAAGCCAATCGCAATTCCGAATCTTTAGACGTAAGTTGGTCAGTCGCAGTCACTTATAGAACCAACGACAATACGGAGACACATCCTCAACATAAGAAATCTTCAGATACAAAACATACGCCCAAGCAATACTGTTGCAAGGAATGTCCAGCAAAATTTTTCAAAAGTTCAGCTCTTACTTACCACTTGGGTTTGCACGGTGGTGAGGGGGAACATAAGTGTAAAAAATGCAGTTATGCCGTTAAAAATGTGGGCAATTTAGCTAAACACGAGATTTTACACGAAAATGATAATAGGTCACCAAACTGTGAATATGACTCCAGCGATGATTTAGATTTCAAAAATATTCCTCTCTCGGGAACAGACTTGTTTCAAAGAAAGACTGAAGCTCAAAAAAGAGTATTGACCGATAAAGATAAATTGGTTAAACCAAATGATCATTTTCCGCCTGTGCTCCAAGCGGATCCTCAATTCGGTTACCTGATGCATGGCAATCCAGAGTTTATTTATCCCACATATTTGAAAAACGGGCGCCAAAAGGAAAAACGATACAAATGCCATAAGTGCCCTTCAGCTTTCGAAAAGCGAGAACAATATAAAATACATTTATCGCTTCACGGCTCTAAACAGAGATATAAATGTGAATTATGCGACTACTCTGTAAAATACTATGCTAACTATGTTCAACACATGAGAAAGCACCAAATGAATGACGAGGCTCAGGCCGAAAGGACGAAAGGAAGCAATGATGAGACAGGCGGTCAAGATGATGTGAAACAAGAAGAAAGCGGGGACATCATCAAACTAGCGATCAAAACCATGCCCAAGGGAACTCCTAAATCAGACTTTCAGCAATTCTCGATAAGAGATCAACAAACTCTTCGCCTGTTGCAACTGAGGAGATCTATGATTAACGGTGACGAGGGAAATACTTCTGAAAACTCGCCAGTCAAGGAGCGCAAAATGCATATGTGTCTCCTTTGTCCATACACCAACCAACGTCAAGATGCTTTGAGCAACCATTACAGAAGGCATGATGACACTGATGCTCTTAATGGTTATCACTGCCGCAGTCAAAAATGCTCTTACTGTGACTTAGAAGTCGCGCAATCGCATTTTCTTAGGGAACATATTAAAACTCATTTCAATTATAACAAAATACTTACTCCAGAATGTTTTGTAGCTAATGATGATGTTAGTTTTACGATATCAAAAATTGATGAAGAATGCGAAGAAGTTGATCTCAAATTAGACATGAAAAATATGATTTTATCATGTAACGATGAAAAAACATTCGTGAAAATTAAGACAGGGGAACTTGTAAGTAGTTGA
- Protein Sequence
- MLQQMSSSLSAQVGEVTTIARPFEGRFSVDVSSEASSDATEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTTTTPSASTAKLETEATVNENVVDNMEDLLEEIEECDDSQMEMDADEQPERADDADMYVARSTSSRLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLATAESANTLPKEEEGSGDSRSSHSVSDNMGLRYAERDIVSCNSDSNDTSSQVSPEGDLSIQDASGQHSPNSGNEDKVNKQSKKAPRPIPQLIPLNTSTPNQNKTPGEPPAKKFKESSSLDLANKFENLPDDITLTPVNNTPKEPVVRKKNESFFDKLKERLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVMMSTSHPSMGSTRCQNCRHRCKSSADLHVHMRTCGKKENTKTPTITKRDNTEASTSSFDKDAEPHPMENVVFVWNNINQGSKFERPLDININDDSTMPESQRNDDAEIVDENEGMNLSPNSLSLGKNVYKCSDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDQNTTGDATLEVDEPLNDTNEMMNTSYEMQPLNLQTQFGDLKYGSTENANQVMRPKKTMWKCKKCNYKDPSKDALLEHVRQHSKVDAGGQEEAKKIDAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPEPVSACTSETFNDFCTRCPFKTNDKKILIAHLQQHQPSSQSIFKCYFCPYFVKDEQDLITHLLLHGITDPEDYIAKAMGCKSPLPEQMVHETVTAASGSAKRHKCQECPYETNSKSQYMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFARKNETEAELEASTTNQKGDKSDSFSEEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTCDNAGRLAEHSKKHGLLYGRIYSTVEEDIPDEDQITRLRRVLELEKSTVCEDTTSEENTLVDSNEIKILYFCQKCPARYFTESELKMHEKFHDLANANKCKNCEFSVPEENDLVAHLSVHSDEHHIRSNMLKFIHNSHSLYREPRLEANRNSESLDVSWSVAVTYRTNDNTETHPQHKKSSDTKHTPKQYCCKECPAKFFKSSALTYHLGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHENDNRSPNCEYDSSDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERTKGSNDETGGQDDVKQEESGDIIKLAIKTMPKGTPKSDFQQFSIRDQQTLRLLQLRRSMINGDEGNTSENSPVKERKMHMCLLCPYTNQRQDALSNHYRRHDDTDALNGYHCRSQKCSYCDLEVAQSHFLREHIKTHFNYNKILTPECFVANDDVSFTISKIDEECEEVDLKLDMKNMILSCNDEKTFVKIKTGELVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220230;
- 90% Identity
- iTF_00377610;
- 80% Identity
- -