Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776244.1:4513918-4520461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.9 1.3e+02 4.0 0.4 1 23 54 77 54 77 0.95

2 20 1 70 4.9 4.3 1 23 84 107 84 107 0.97

3 20 5.7 4e+02 2.5 3.9 1 23 182 204 182 204 0.97

4 20 0.0022 0.15 13.2 1.0 2 23 210 231 209 231 0.97

5 20 2.8 1.9e+02 3.5 1.5 1 23 237 259 237 260 0.94

6 20 0.19 13 7.1 5.3 2 22 494 514 493 514 0.96

7 20 0.44 31 6.0 0.4 2 23 767 788 766 788 0.96

8 20 0.48 33 5.9 0.8 2 23 863 884 862 884 0.96

9 20 0.04 2.8 9.3 0.5 1 23 892 914 892 914 0.97

10 20 0.3 21 6.5 5.4 1 23 952 974 952 974 0.95

11 20 0.00031 0.021 15.9 4.0 1 23 983 1005 983 1005 0.99

12 20 0.33 23 6.4 2.2 1 23 1086 1108 1086 1108 0.98

13 20 0.037 2.6 9.4 1.8 1 23 1164 1186 1164 1186 0.95

14 20 0.077 5.4 8.4 0.1 2 23 1193 1214 1192 1214 0.97

15 20 0.0057 0.4 11.9 2.1 1 23 1284 1306 1284 1306 0.95

16 20 0.018 1.3 10.3 0.9 1 23 1312 1334 1312 1334 0.95

17 20 0.0087 0.6 11.4 2.6 1 23 1424 1446 1424 1446 0.97

18 20 0.00022 0.015 16.4 1.4 1 23 1452 1474 1452 1474 0.99

19 20 1 71 4.9 2.0 1 23 1563 1585 1563 1585 0.96

20 20 0.0044 0.31 12.3 1.5 2 23 1600 1621 1599 1621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.9	1.3e+02	4.0	0.4	1	23	54	77	54	77	0.95
2	20	1	70	4.9	4.3	1	23	84	107	84	107	0.97
3	20	5.7	4e+02	2.5	3.9	1	23	182	204	182	204	0.97
4	20	0.0022	0.15	13.2	1.0	2	23	210	231	209	231	0.97
5	20	2.8	1.9e+02	3.5	1.5	1	23	237	259	237	260	0.94
6	20	0.19	13	7.1	5.3	2	22	494	514	493	514	0.96
7	20	0.44	31	6.0	0.4	2	23	767	788	766	788	0.96
8	20	0.48	33	5.9	0.8	2	23	863	884	862	884	0.96
9	20	0.04	2.8	9.3	0.5	1	23	892	914	892	914	0.97
10	20	0.3	21	6.5	5.4	1	23	952	974	952	974	0.95
11	20	0.00031	0.021	15.9	4.0	1	23	983	1005	983	1005	0.99
12	20	0.33	23	6.4	2.2	1	23	1086	1108	1086	1108	0.98
13	20	0.037	2.6	9.4	1.8	1	23	1164	1186	1164	1186	0.95
14	20	0.077	5.4	8.4	0.1	2	23	1193	1214	1192	1214	0.97
15	20	0.0057	0.4	11.9	2.1	1	23	1284	1306	1284	1306	0.95
16	20	0.018	1.3	10.3	0.9	1	23	1312	1334	1312	1334	0.95
17	20	0.0087	0.6	11.4	2.6	1	23	1424	1446	1424	1446	0.97
18	20	0.00022	0.015	16.4	1.4	1	23	1452	1474	1452	1474	0.99
19	20	1	71	4.9	2.0	1	23	1563	1585	1563	1585	0.96
20	20	0.0044	0.31	12.3	1.5	2	23	1600	1621	1599	1621	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGGCGAGGTCACTACTATTGCGCGCCCGTTCGAAGGTCGCTTCTCTGTGGACGTCTCTTCGGAGGCCTCCTCGGACGCGACGGAAGAGTTCGAACTACCGCAGTGCAAGATAAGAAGGAACTATAACTGTGCGAAGTGCACTTATAATACACAAAATCCGCGCGCTTATCTTGTTCACACTCGAGACGTTCATTTCGGAAGATTTAAGATTTATGAGTGTCAGCATTGCATTTATGCCTCGAGACATCAGCAGAAGCTCTTGAGGCACACGAAGATGGTTCACGGGACCACGACGCCTTCATCTTCTACGATTAAATTGGAAACAGAAGTTACCGCTAATGAGAGTGTAGCGGAAAACATGGAAGATCTTTTAGAAGAGATAGAAGAATGTGACGACTCTCAGATGGAGATGGACGTAGACGAGCAACTCGAGCGAGCCGATGACGCAGATATATATGTTGCTAGAAGTACCAACTCGCGATTGCCGAAGGGaaaaggaaagtttttttCTTGCGACAAATGCAACTACGTCACCCACATAAAGGCGCGATACACGAAGCACGTCAAATACCACTCGATGCCGATGATCAAGTGCACCATGTGCGACTTCCGCACGCCATACAAGTGGAATCTGGATCGACACATGAAAAACCACGGCGGAAGCGGTTGTTTCGTGTGCTCAAAGTGCACCTTCACGGCGGACATCAAGCAGAGCCTGACGGTGCACGAAATGAATCATCACACGCCGCCCGTGGGCCAATCGGCGTCGAGCCGGCGTCGCAACCGGGTGGGAGCCAGCGACCTAGCGACCGCGGAGTCGGCTAACGCGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGGTCCTCGCACTCGGTCTCGGACATCATGGGCTTGCGATACGCGGAGAGAGATATAGTAAGCTGCAACAGCGATTCCAATGACACTTCGTCACAAGTCAGTCCAGAAGGGGATGAATTCGTTCAGGACGCCCCAGGTCAACATTCCCCGAACTCAGGAAACGAAGACAAGGTTAAcaagcaaaacaaaaaagcTCCCAGGCCAATACCACAACTTATTCCTCTTAATGCATCAACCCCTAATCAAAACAAAGCCACGGGCGAACCGCCAGCAAAGAAATTCAAAGAATCCACCAGTTCAGAGCTAGCGAGCAGGTTTGAAAACTTGCCTGATGACATAACTTTAACACCGGTAAACAGCACGCCAAAAGAAACTGTtgtccgaaaaaaaaatgagtcGTTCTTCGACAAGTTGAAGGAAAGATTACTGACAGAAACGGGCGAAGAGGGATCTCTAAAATGCAAGAGCTGCGGTTTCGAGAGCAAATGCCTGTCGGAACATTCCGTGCACGAAAAGAACTGCGCAGCTCAAGCTAGCCGCGTTATAGTAAGCACGTCGCATTCCAGCATTGGCTCCACTCGCTGCCAAAACTGCAGACATCGCTGTAAATCTAGCGCAGATTTACATGTGCACATGCGCACTTGCAACAAGAAAGAGAACACCCAAACCCCTACAGAAACCAAACGCGACAACAATGAAGCTACTTCTTCAAGTTTCGATAAAGACGCAGAACCTCACCCCATGGAGAACGTTGTTTTCGTATGGAACACAATTAACCAAGACAACAAATTTGAAAGACCTCTTGATATCAACATTAACGATGACTCAACAATGCCAGATTCACAAAGAAATTATGACGCCGAAATCGTTGACGAAAACGAAGGAATGAATTTATCACCCAACAGTTTGAGCCTCGAGAAGAACGTTTACAAATGCTCAGATTGCAAGTTCTGGGCAGCTACCGCTTCTAGATTCCACGTTCACATTGTAGGACATCTGAATAAGAAGCCATTTGAATGCTCTCTATGCAAATACAAATCAAATTGGCGCTGGGATATAACCAAGCATATAAAATTGAAGTCCGTGCGAGACCCAGAGCATAACGACGCTAAAGTGCTGATGACAGACGAGACTGGCAGGCGTAACTACAGCAAATACAACAAGTTCTTGGCAGTCCCAGTCCTAAACGAAATGGGGGAAACTGAATTTCATTATATTGATCAAAACACAACGCTAGACGCTACAATGGAATTAGATGAGTCACAGAATGATACCAACGAAATGATGAACACGTCTTATGAAATGCAGCCGCTCAATTTGCAAACGCAATTTGGTGATATCAAGTATGGCTCGACGGACAACGATAATCAAGTTACGAAACCAAAAAAGACTATGTGGAAATGCAAAAAGTGCAACTACAAGGATCCGTCGAAGGATGCGTTACTAGAACACGTGAGGCAGCACTCCAAAACAGATAGCGGGGTACAGGAAGAAGCCAAGAAGCCCGACGCACCTGACGCAGCTGATCTTGCGTACCGATGCGGCCACTGCAATCAATTATCCAATTGGAAACATGTTATACAGAGGCATTGCCGCTTGAAACACGACggaataataaaagtaatcaCCACAGTGAAGCCGAAACCTGACCTGATCGCAACTTCGACCAATGAGATCTTCAGTGACTACTGCACCAAATGCCCGTTCAAGACAAATGACAAAAAAGTACTCCTTGAGCATTTACAGCAGCATCAGCCGTCCTCTCAATCCATTTTCAAATGCTACTTCTGTCCCTACTTTGTTAAGGATGAGCAGGATTTGATTCAACATCTTTTACTACACGGAATTACGGATCCGGAAGATTATATAGCAAAAGCAATGGGCTGCAGATCTCCCCTTCCCGAGCCAGTGATTCACGAAACGGTGGCCGCCGCAAGTGGTTCAACTAAGCGCCATAAGTGCCACGAATGCCCTTACGAAACCAATAGCAAGTCTCAGTACATGTACCACGAACAGTTTCATCGTACCACGTCTGCGGAAACTCCTTATAAATGTCCCGAATGCAACTATAGCGTGTCAAAGAGACATTTACTTCACCAACACTTGAGAGTTCACGGAATTTTTACAAAGAAAAACGAAACCGAAGCAGAATTAGAAGCGTCAACGTCTAACCAAAAACCTGACAAGTCTGATAGCTTCAGTGAGGATATTCCTTTCGTATGGGTTTCAGCAAGAAATGAATTCCATAAAATGTACAAATGTCGCTATTGTTCGTACGTCAACTCTCAGAAATGTAAAATACCCAACCATGAAAAGATACATTGTCTTGGATTCGAAAATAGCGAAGTGATAATATACAAATGTTTAGAATGTAAATTTACGTGTGATAATGCCGGGCGACTGGCGGAACATTCCAAAAAGCATGGTCTTCTGTACGGTCGCATTTACAGTACTGTAGAGGAAGACATTCCAGATGAAGATCAAATTACTAGGCTTCGTAGAGTTATTGAACTGGAAAAGAGCACAGTATGCGAAGATACGACTACAGAAGAAAACGCATCAGTAGATTccaatgaaacaaaaatactataCTTTTGTCAGAAATGCCCAGCCAGATATTTTAATGAAAGTGAACTTAAAACGCATGAGAAGTTCCATGATCTGACGAATGCAAATAAATGTAAGAACTGTGAATTTTCAGTCCCAGAAGAGAGTGATCTAATTGCCCATCTATCTGTTCATTCAGACGAGCATCACATAAGGTCTAACATGCTTAAGTTTATTCACAATTCGCACTCTCTCTATAAAGAACCTCGATTGGAAGCCAATCGCAATTCCGAATCTTTAGACGTAAGCTGGTCAGTCGcagtaaattataaaaccaGCGAAAATACGGAGCCTCATTCCCAACATAAGAAATCTTCTGATACAAAACATACGCCCAAACAATACTGTTGCAAAGAATGTCCAGCTAAATTCTTTAAAAGTTCTGCGCTCACGTATCACATGGGTTTGCACGGTGGCGAGGGGGAACATAAGTGTAAAAAATGCAGTTACGCCGTTAAAAATGTTGGCAATTTAGCTAAACACGAGATATTACACGATAATGACAATAAGTCTCCAAATTGCGAATATGAGTCCGGCGATGatttagattttaaaaatattcccCTCTCGGGAACAGACCTATTTCAAAGAAAGACTGAAGCCCAAAAAAGAGTATTAACCGATAAAGACAAATTGGTTAAACCAAATGATCATTTTCCGCCTGTGCTCCAAGCAGATCCTCAATTCGGATATCTGATGCATGGCAACCCGGAGTTTATCTATCCGACATACCTGAAAAACGGGCGCCAAAAGGAAAAGCGATACAAATGCCATAAGTGCCCTTCAGCTTTCGAAAAGCGTGagcaatataaaatacatttatcgCTTCACGGTTCCAAACAAAGATATAAATGTGAGTTATGCGACTACTCAGTAAAATATTACGCCAATTATGTTCAACACATGAGAAAGCACCAAATGAATGATGAAGCTCAGGCCGAAAGGATGAAAGGAAGCAATGTCGAACCTGACGATCAAGGAGATGTAAAACAAGAAGAAACCGCGGACAACATCAAACTTGCAATCAAAACCATGCCCAAGGGAACTCCTAAAACTGATTTTCAGCAATTCTCGATAAGAGATCAACAAACCCTTCGTCTGTTGCAACTTAGAAGATCAATGATTAACAGTGACGAGACAGTCAGTTCTGAAAATTCACCAGTGAAGGAGCGCAAAATGCACATGTGTCTCCTCTGTCCTTACACGAACCAACGGCAAGATGCTTTGAGCAACCATTACAGAAGACATGATGATACTGATGTTCTCAATGGTTATTATTGCCGCAGTCAAAAATGCTCTTACTGTGATTTGGAAGTCGCACAATCTCATTTCCTAAGAGAGCATATAAAAActcattttaattataataaaattcttaCGCCTGAATGTTTTGTAGCTAATGATGATGTTAGTTTTACGATATCTAAGTTAGACGAAGAATGTGAAGCCGTTGATCTCAAATTAGACATGAAAAATAAGATTATATCGTGCAATGATGAAAaaatttttgtcaaaattaagacaggggAACTTGTAGTTgagtaa
Protein Sequence: MLQQMSSSLSAQVGEVTTIARPFEGRFSVDVSSEASSDATEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTTTPSSSTIKLETEVTANESVAENMEDLLEEIEECDDSQMEMDVDEQLERADDADIYVARSTNSRLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGCFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSASSRRRNRVGASDLATAESANALPKEEEGSGDSRSSHSVSDIMGLRYAERDIVSCNSDSNDTSSQVSPEGDEFVQDAPGQHSPNSGNEDKVNKQNKKAPRPIPQLIPLNASTPNQNKATGEPPAKKFKESTSSELASRFENLPDDITLTPVNSTPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVIVSTSHSSIGSTRCQNCRHRCKSSADLHVHMRTCNKKENTQTPTETKRDNNEATSSSFDKDAEPHPMENVVFVWNTINQDNKFERPLDININDDSTMPDSQRNYDAEIVDENEGMNLSPNSLSLEKNVYKCSDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSVRDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNEMGETEFHYIDQNTTLDATMELDESQNDTNEMMNTSYEMQPLNLQTQFGDIKYGSTDNDNQVTKPKKTMWKCKKCNYKDPSKDALLEHVRQHSKTDSGVQEEAKKPDAPDAADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDLIATSTNEIFSDYCTKCPFKTNDKKVLLEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPEPVIHETVAAASGSTKRHKCHECPYETNSKSQYMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFTKKNETEAELEASTSNQKPDKSDSFSEDIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTCDNAGRLAEHSKKHGLLYGRIYSTVEEDIPDEDQITRLRRVIELEKSTVCEDTTTEENASVDSNETKILYFCQKCPARYFNESELKTHEKFHDLTNANKCKNCEFSVPEESDLIAHLSVHSDEHHIRSNMLKFIHNSHSLYKEPRLEANRNSESLDVSWSVAVNYKTSENTEPHSQHKKSSDTKHTPKQYCCKECPAKFFKSSALTYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHDNDNKSPNCEYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGSNVEPDDQGDVKQEETADNIKLAIKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMINSDETVSSENSPVKERKMHMCLLCPYTNQRQDALSNHYRRHDDTDVLNGYYCRSQKCSYCDLEVAQSHFLREHIKTHFNYNKILTPECFVANDDVSFTISKLDEECEAVDLKLDMKNKIISCNDEKIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00857211; iTF_00362141;
80% Identity: -