Lsuf009405.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_948098915.1
- Location
- OX402546.1:19058580-19073479[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.29 1e+04 -3.6 0.2 67 79 79 91 49 106 0.51 2 3 4e-70 1.4e-65 222.5 16.6 1 267 124 378 124 405 0.85 3 3 1 3.4e+04 -5.6 10.7 125 165 425 469 411 479 0.54
Sequence Information
- Coding Sequence
- ATGGGACGTCGTACCGAAATGGCTACGCCTGATAATAGCGACGAAGAGAGTGGAGATGCTTTTACTGATGGTGACTTCGGTGAATCTGATGATGAAACCGTCCTTGAACGGGATCAAAACAAACCTTCGAATATTCCCGTCATCGAAACAATCAATGAACAAGTTCAACAAAAGTTAACAAACGGCGGCTCCCACAGTAATGGCTTTGATCAATCAAATGAAGAACTAAAAGTTAACGGACGTAGAAACAGTGAACACCAATCGAGTGATGTAGAAAACTGTAGTGGCATAGCAGCAGATGCAAGACGCGATTCGCACGGCGATCAAAACCCTTCGATTGTCGGAATTATCGGGGACCAGCATGGTCATGCAGAACAACGTCTTGCTGCGCGGCGGGCGGCGCGGGCTGAGGCGAGAGAGATCCGCATGAGAGAGTTGGAGCGGCAGCAACGGGAACAAGAGGACCATGCGGACAAGGCGTACGATATGTACGCAGAGACAGTTGGGAGACGAGGCCCTCGGATGGCGGCCCTCAGTCCGGCTACGGTGCTGTCGCCGCGTCGGAGCTCAGAGGACTCTGCGGATGACACATTCAATATCAAAGACTTAAGACATGAACTGAAAGAAGTAGAAGAGAAGTTCCGGAAGGCTATGATTCTGAACGCGCAATTGGACAACGATAAGGCGTCGCTCGGGTACCAGCTCGAACTGTTGAAGGACAGGATCGATGAGTTGCAGGAAGAACACGCACAGTTACAGCGCGAGCACCGCGAGAAGTGCTCGAGCTACGAGCGAGTGCGGCGCGAGCACGTGTGCGTGACGCGCGAGCTCGCCGGCGCGCGGGACGCCGTGCGCGCGAGGGACGCCGCCGCGCACGCCGCCGGCTTCGAGTTCGCCGACGCACCGCCCGGCGCCAGCGCGCCCGGCTTCGGCGCCGTGCCGCCGCTCGCGCTGCTGTCGCACGCCGCCAGCCGCCTGCTCGGCGACGGAGAGGACACGTTGGACGTGCGATTGCAGAACCTTGTAAACTCGAAGCAGTCCCTGGAGTCGGAGGTACGCAAACTAAAGCTGACGCTGAACGAGGAGCGCGCCGCCAGACAGAACGGCGTCGCCAACCACCACGACGAACTCTACGAAACCGAACTGGAGTGCGTCCGCAAGGCGCTGGGCGAGGCGAAGGGCCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGGCGGCGGCCGCGGCGGCGCGCACGCAGGCGCAGCTGCAGCGGCTGCGCGCGCGACAGGACGACCACGACGGACTCGAGGAACAACTCAAGCAGGAGCGCAGGAAGCTGCAGAGAGAGGCGCGAGAGGCGTTAAATCGGGTGGAAGAGTTGGAGACTGAAAATAGTCACCTTACCAAGAGACTCGATAAACTCAAGAACGCCAAATCAGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MGRRTEMATPDNSDEESGDAFTDGDFGESDDETVLERDQNKPSNIPVIETINEQVQQKLTNGGSHSNGFDQSNEELKVNGRRNSEHQSSDVENCSGIAADARRDSHGDQNPSIVGIIGDQHGHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRMAALSPATVLSPRRSSEDSADDTFNIKDLRHELKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEEHAQLQREHREKCSSYERVRREHVCVTRELAGARDAVRARDAAAHAAGFEFADAPPGASAPGFGAVPPLALLSHAASRLLGDGEDTLDVRLQNLVNSKQSLESEVRKLKLTLNEERAARQNGVANHHDELYETELECVRKALGEAKGRAARAEAEAALAAAAAARTQAQLQRLRARQDDHDGLEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909728;
- 90% Identity
- -
- 80% Identity
- -