Lcur010814.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- -
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000030.1:1808923-1809495[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-08 4.6e-05 24.3 0.0 5 43 19 55 15 57 0.83
Sequence Information
- Coding Sequence
- atggttaacaaatataaaagaaaaactacaaaTGCATCATGGGACGAGAAAGTAATGAAACTTGCTATGGAAGAAGCTAGTAAAGGATCAGTGAATGGTGCGGCTAAGAAGTATGGTATTAACTTATCTACGTTGCAGCgacatattaaaaaaggatGTCCGAAGAAAAAACTCGGGAGGTACACAACTATATTTACGGACATTCAGGAACTCGAGCTTCTCGAATATGTGTTCCAAAtggataatttgttttttggacTTACGAAGAAAGAATTCTTAGAGCTCGTTTACCAATATGCTGAATCCAACAATATCCTACACCCATTCAAAAATGGAGCGGCAGGTGAAGATTGGTACAGTGGGTTTAAAACACGACATCCTGATATAACTCTACGCCATCCAGAACCGACGTCTTTAGCCCGCGCCAGAGGTTTTAATAAACCACAAGTACAAAGATTTTTTGACCTGCTAGAAGGAGAGATCGACAAACATAAAATCGACGCGACGCGCATTTACAATGTCGACGAAACTGGTATTCAGACTAATAGCAACAAGCCGCCTAGAATTCTCTAG
- Protein Sequence
- MVNKYKRKTTNASWDEKVMKLAMEEASKGSVNGAAKKYGINLSTLQRHIKKGCPKKKLGRYTTIFTDIQELELLEYVFQMDNLFFGLTKKEFLELVYQYAESNNILHPFKNGAAGEDWYSGFKTRHPDITLRHPEPTSLARARGFNKPQVQRFFDLLEGEIDKHKIDATRIYNVDETGIQTNSNKPPRIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178497; iTF_01178500; iTF_00771853; iTF_01230512; iTF_01264533; iTF_01264541; iTF_01029206; iTF_00680477;
- 90% Identity
- iTF_01264533;
- 80% Identity
- -