Pari027620.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751444.1:9865661-9866194[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-07 9.4e-05 23.3 0.0 16 43 28 55 21 57 0.87
Sequence Information
- Coding Sequence
- ATggttaacaaatataaaagaaaaacctCTAATGCATCATGGGACGAGGTAGTTATGAAACTTGCTATGGAAGAAGCTAGCAAAACCTCAGTGAAAGGTGCGGCTAAGAAGTACGGTATAAACTTATCCACGTTGCAGCGGCACATCAAAAAAGGATGCCCGAAGAAGAAACTTGGCAGGTACACAACTGTATTCACGGATCCTCAGGAACTCGAGCTTCTTGAATATGTGTTTCATATGGATGGTTTGTTTTTTGGACTGACCAAGAAAGAATTCTTAGAACTCGTGTACCAATATGCCGAAAACAACAATATTCCACACCCATTCAAAAATGGAATGGCAGGTGAAGATTGGTACATTGGGTTTAAAGTACGACATCCTGATTTAAGTCTACGCCGTCCAGAACCGACGTCATTAGCACGCGCTAGGGGTTTTAACAAACCACAAGTACAGACGTTTTTCGATTTGCTAGAGGGAGAGATCGATAAACATAAAATTGACGCGACGCGCATTTACAATGTTGACGAAACTTGA
- Protein Sequence
- MVNKYKRKTSNASWDEVVMKLAMEEASKTSVKGAAKKYGINLSTLQRHIKKGCPKKKLGRYTTVFTDPQELELLEYVFHMDGLFFGLTKKEFLELVYQYAENNNIPHPFKNGMAGEDWYIGFKVRHPDLSLRRPEPTSLARARGFNKPQVQTFFDLLEGEIDKHKIDATRIYNVDET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00855832;
- 90% Identity
- iTF_01264533;
- 80% Identity
- -