Lcur018529.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- lov
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000072.1:1215241-1222229[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-18 2.6e-15 57.1 0.0 1 44 111 154 111 155 0.96
Sequence Information
- Coding Sequence
- ATGAATGGGGTAGGTCTGACGTGTTTACGCGCCGGTAGGGTTGAGTGCGCTTTCGTTTTCGACACGCGTGTGGGGCGGAATGGATCGATGGGCTGCACACACGGCTCGTGTCGACGATTGACGGTTCTCGATTTAAGCTTCGAGTTACTGTTCGGAATCGACTCGCCCCTGGGCCTCTTCCCGCCCGGAATGGAGCACAAGATGTACCCGCTGATGGACGTAGAGCACCGCGCGCCGCCATTGGACTCGCAGCTCTTCACGAACGTTAAGAAGAAATGGCGACCGAAAGGGCAGCATAGCGCCCCGCGCGGCGGCCCACCGCGCTCTTGGACGAACGCAGAGCTAACAGAGGCGCTGCAGCACGTGTGGAACAAGAAAATGACCACTAGCCAGGCGTCGAGGATCTTCGGGATACCATACAACTCGCTGCTCATGTACGTCCGCGGCAAATACGGCAAGAGCCTGAAGCTGGAGCAACTCCGCAAGGACTGCATCGGCGGACCATTGGACGTACTGAATCTCAACTCTggaaataacaacaacaaccaCCCTAGCAAGCACCATGACAAAGACGACCAGCACCAGAACACTGGGCAGCGACCTGCGAGCTCTGAGCCCGATATCGCCTCCAGCCCGATGTTCAACCCGTTCCAACAAGGCTTCTACCCAGAGTTCCCGCCCGGATTCCCTATGCCACTGAACATGCTCCACCTGCTGCCGCCGAACGACAAAGCCCGCGATCTCTACCAATCCATGCCGATGGCCCTGGACTCCCTCTCCGTAGTGACGAAGGAGGAGGATTGCAAGAGTGATCGCTCGAAAGAGAACTCCGCGGACGAAGAGGGTGACTCGTATCGCACCCCATCACATCCGCATCCGCCAGACAATCGCACTCTTTACATCATAACGGCCAAGATTAAACGCCTATCTTAG
- Protein Sequence
- MNGVGLTCLRAGRVECAFVFDTRVGRNGSMGCTHGSCRRLTVLDLSFELLFGIDSPLGLFPPGMEHKMYPLMDVEHRAPPLDSQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSKHHDKDDQHQNTGQRPASSEPDIASSPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNDKARDLYQSMPMALDSLSVVTKEEDCKSDRSKENSADEEGDSYRTPSHPHPPDNRTLYIITAKIKRLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00673413; iTF_01221417; iTF_00942730; iTF_00000236; iTF_00282189; iTF_00889101; iTF_01490064; iTF_00642260; iTF_01143764; iTF_01146132; iTF_01332470; iTF_00187064; iTF_00970328; iTF_00621147; iTF_01151995; iTF_01142333; iTF_01260029; iTF_00077410; iTF_00180387; iTF_00076391; iTF_01156201; iTF_00959339; iTF_00958607; iTF_00960095; iTF_01129965; iTF_01280109; iTF_00033742; iTF_00250385; iTF_00390305; iTF_00206921; iTF_00818281; iTF_00649938; iTF_00055318; iTF_00032828; iTF_00205980; iTF_00143005; iTF_01148754; iTF_00236564; iTF_00323415; iTF_00957880; iTF_01495706; iTF_01176123; iTF_00195101; iTF_00790174; iTF_00666431; iTF_00125070; iTF_01208035; iTF_00825513; iTF_01209129; iTF_00922808; iTF_01157577; iTF_01154932; iTF_01158612;
- 90% Identity
- iTF_01145217; iTF_00180387; iTF_01494983; iTF_00197298; iTF_01494242; iTF_01496482; iTF_01129965; iTF_01495706; iTF_01148754; iTF_01143764; iTF_01146132; iTF_01142333; iTF_01139541; iTF_00957880; iTF_01148030; iTF_00922808; iTF_01078125; iTF_01080654; iTF_01507093; iTF_01507989; iTF_00843418; iTF_00824632; iTF_01076312;
- 80% Identity
- -