Lyun007402.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- Sub1
- Assembly
- GCA_013368075.1
- Location
- JABVZV010001223.1:11608279-11608652[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.42 8.1e+03 -3.5 0.9 32 37 4 9 3 9 0.81 2 2 5.8e-26 1.1e-21 76.1 0.7 1 50 39 88 39 90 0.96
Sequence Information
- Coding Sequence
- atgccaaaaaataagCCAAGTAAGAAGAAAAGCGACACCTCAGACTCCGATTCCGGTCCCGAAGATAGGGGTCCCGCCAAGAAGCAGAAGGTCGACTCGAGCGAGGAGAACTCGTGGAGTCTTGGTAAAAATCGTTTTGTTAAATTAACAGAGTTTAAGGGGAAGTGGTATATCAACATTCGAGAATTTTATGACGCTGGAGGCGAGTTGAAACCCGGCAAGAAAGGAATTATGCTTACCATGGAGCAGTGGCATTTGTTCAAGGGGTCCATAGATGAAATAGAAGATGCTATCAAAAGGAATGTTTAA
- Protein Sequence
- MPKNKPSKKKSDTSDSDSGPEDRGPAKKQKVDSSEENSWSLGKNRFVKLTEFKGKWYINIREFYDAGGELKPGKKGIMLTMEQWHLFKGSIDEIEDAIKRNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399164;
- 90% Identity
- -
- 80% Identity
- -