Lmin002082.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963082975.1
- Location
- OY720344.1:32883428-32900145[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.6e-16 1.8e-11 44.9 15.1 1 41 33 74 33 80 0.82 2 3 7.2e-70 1.4e-65 222.7 8.8 65 300 70 322 65 322 0.85 3 3 0.12 2.2e+03 -1.3 6.2 209 250 340 380 323 396 0.50
Sequence Information
- Coding Sequence
- ATGGATAGTTCCGACGCTGGGGGCAGCGGGGGCCGCCGAAGAGCCCCCACAAAACACTCAGCTGAAGATCAAGCCCTCAATCAAATTGCTAAAGAGGCTGAGGCCCGACTGGCTGCTCGTCGTTTGGCTCGCGCTGAGGCCCGAGAAATTCGTATGCGTGAATTGGAACGACAACAACGCGAGCTCGATGAATCTGCGTCGGATATGTCATACACGGGCCGAAGAAGTAGTGAAGATAGTCTGGAAGATGCCGGGGGAGGTGGCATCACGGGGGGTGGCTCCGCACCCGCAGCTGTACAACGCGATTTCAGCGATCTCGAAGAGAAATTCCGCAAAGCCATGGTGCAGTCAGCACAACTGGACAACGAAAAAGCATCACTTAGCTTTCAGgtCGAACTATTCAAAGATCGACTTGAAGAGTTAGAAGAGGCTCATGGTCAAGTACAACGAGAATTACGTAATAAAACACGAGAAGCGGACCAATTTCGCAGAGGAGCTGCTCGATTACAAGAGGAACGAGACGGGTATAGAGCCCAACTCGAAGAACGTGATCGTCTCATTGCTGAAGCGGGTCTTGCCATTGTCTGTGATGATGATGGAGCGAACAGTGAAGAGAGTAACAGCGAAGGTGATAATGAGGAAAATGTGGTTTCAATGCCGAAAAAAGCACTTGTGTCGCAGGCAAATGCAGatttattatcaaaacaagGCGCTGGAACGCTTGATGTTCGACTTAAACGATTAGCATCCGAAAGAGATGATCTAGCAGATcaggttCGAcatttagaattagaattagaaGAGGAACGTGGTCGTAGACGAAATGCCACTGGAATTGCAGGTCTAGGAGCTGCTCCTAATGGCCCACCATCAAATTCCGCTCTTGAAGATATCCAACgagaaaatagcaaattaattgCTGAATACAAATTCAAACTACAAAAGTCTGAACAGGATCTAGCAACACTTCAAGCAAATGTAGCTCGTCTTGAAAGTCAAGTGGTTCGGTACAAATCACAGGCAGAGACTTCCGAAAAAGCAGAAGGAGAATTGAAAGTAGAAAAACGCAAATTACAACGAGAActGCGTGAGGCACAGACCAGAGTGGATGAACTTGAAGTGTCCAATAATCATTTACAAAAGCGAATGGACAAATTGAAGAATGCAAAATCAGCTCTTTTAAAAGAGCTCTGA
- Protein Sequence
- MDSSDAGGSGGRRRAPTKHSAEDQALNQIAKEAEARLAARRLARAEAREIRMRELERQQRELDESASDMSYTGRRSSEDSLEDAGGGGITGGGSAPAAVQRDFSDLEEKFRKAMVQSAQLDNEKASLSFQVELFKDRLEELEEAHGQVQRELRNKTREADQFRRGAARLQEERDGYRAQLEERDRLIAEAGLAIVCDDDGANSEESNSEGDNEENVVSMPKKALVSQANADLLSKQGAGTLDVRLKRLASERDDLADQVRHLELELEEERGRRRNATGIAGLGAAPNGPPSNSALEDIQRENSKLIAEYKFKLQKSEQDLATLQANVARLESQVVRYKSQAETSEKAEGELKVEKRKLQRELREAQTRVDELEVSNNHLQKRMDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00090419;
- 90% Identity
- iTF_00090419;
- 80% Identity
- -