Amar029737.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010002084.1:838-10331[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 4.9e-13 50.9 13.5 1 46 9 54 9 60 0.91 2 2 1.1e-70 3.6e-66 225.4 10.1 67 300 47 298 44 298 0.85
Sequence Information
- Coding Sequence
- atgtcaaatttgaatAGTTatagaGCGGAGGCGCGACTGGCAGCGCGTCGGCTGGCCCGCGCCGAGGCCCGGGAGATTCGAATGCGCGAACTGGAAAGGCAACAGCGCGAACTCGACGAGTCATCGGATATGTCCTACTCCGGGCGGCGGAGCAGTGAGGACAGTCTGGAGGACTCCGGGGGCGGCGGCCCTCCTGGAGGAGGCTCTGCCCCCGCCGCTGTACAACGTGACCTCAGCGACCTCGAGGAGAAGTTCCGCAAGGCCATGGTGCAGTCTGCACAACTCGACAACGAAAAGGCCTCACTTAGTTTCCAGgtGGAGCTTCTGAAAGATCGACTTGAGGAATTAGAGGAGGCACACGGCCAAGTACAACGAGAGTTACGGAATAAAACTAGAGAAGCGGACCAATTTAGGAGAACGGCTGGACGTCTTCAGGAGGAACGTGAGGGATACCGGGCGCAACTCGAAGAACGGGATCGTCTAATCGCCGAAGCTGGCCTGGCCATCGTGTGTGATGATGACGGTGAAAGTGGCGAGGATAGTGACACTGAGGATAACCACAACGACGAGGCAGCCGCCTCCATGCCTAAAAAGGCCCTAGTCTCGCAAGCAAATGCAGACTTATTGGCCAAACAAGGAGGAGGAACGCTCGACGTGCGGCTCAAACGACTCGCTGCTGAGAGGGAAGATCTCGCCGATcagGTTCGTCATCTGGAACTAGAGTTGGAGGAGGAACGAGGTCGACGACGTAGTGCCACCGGCCTAAGTGCCTTGGGATCCGCACCGAACGGTCCTCCAGCCAATTCAGCTCTCGAGGATATCCAACGAGAGAATAGCAAACTGATAGCTGAGTATAAGTTCAAACTACAAAAGTCCGAACAAGATTTGGCTACTCTACAAGCGAACGTGGCACGTCTCGAGAGTCAAGTAGTGCGTTATAAGTCACAGGCGGAGACATCCGAAAAGGCGGAGGGCGAACTCAAGGTTGAGAAACGCAAACTCCAAAGAGAG
- Protein Sequence
- MSNLNSYRAEARLAARRLARAEAREIRMRELERQQRELDESSDMSYSGRRSSEDSLEDSGGGGPPGGGSAPAAVQRDLSDLEEKFRKAMVQSAQLDNEKASLSFQVELLKDRLEELEEAHGQVQRELRNKTREADQFRRTAGRLQEEREGYRAQLEERDRLIAEAGLAIVCDDDGESGEDSDTEDNHNDEAAASMPKKALVSQANADLLAKQGGGTLDVRLKRLAAEREDLADQVRHLELELEEERGRRRSATGLSALGSAPNGPPANSALEDIQRENSKLIAEYKFKLQKSEQDLATLQANVARLESQVVRYKSQAETSEKAEGELKVEKRKLQRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00849818;
- 90% Identity
- iTF_00849818;
- 80% Identity
- -