Klyc028143.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- nfxl1
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000033.1:4258369-4260840[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2 3.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 22 0.13 2.1e+03 -0.3 0.4 4 10 169 175 168 175 0.95 3 22 5.8e-07 0.0099 16.8 14.7 3 19 186 202 185 202 0.95 4 22 2 3.4e+04 -4.9 1.1 6 18 227 231 227 232 0.43 5 22 1.2e-07 0.0021 18.9 14.0 3 19 239 255 237 255 0.92 6 22 0.76 1.3e+04 -2.8 2.2 6 10 280 284 279 284 0.83 7 22 3.2e-10 5.4e-06 27.2 14.7 1 19 290 308 290 308 0.99 8 22 1.9e-06 0.033 15.1 16.2 3 19 345 361 344 361 0.93 9 22 0.66 1.1e+04 -2.6 0.5 1 5 370 374 370 379 0.80 10 22 2 3.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 11 22 4.1e-06 0.071 14.1 18.6 1 18 395 412 395 413 0.97 12 22 1.3e-09 2.2e-05 25.2 14.1 1 19 422 440 422 440 0.99 13 22 0.016 2.8e+02 2.6 7.3 9 19 488 498 476 498 0.85 14 22 0.017 3e+02 2.5 5.9 4 12 510 518 508 518 0.90 15 22 0.31 5.3e+03 -1.5 3.5 14 18 547 551 547 552 0.87 16 22 0.091 1.6e+03 0.2 0.7 7 12 567 572 567 579 0.78 17 22 6e-06 0.1 13.5 6.1 1 11 588 598 588 599 0.98 18 22 0.7 1.2e+04 -2.6 0.9 15 18 613 616 612 617 0.85 19 22 0.00019 3.2 8.8 14.7 4 18 630 645 628 646 0.82 20 22 2 3.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71 21 22 0.47 8.1e+03 -2.1 1.2 5 10 663 668 663 668 0.93 22 22 5.1e-05 0.87 10.6 14.5 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGTCGCGTAAATATCGCGATGCAGCCGCAAAACTGCAGCAAAACGTACAGCGGCACTTACAGGAAATGAAGGAGCTATCTTCATCGGACGACGAGGATCCCTACGAGTCCAACGTTCTCGAGACTGTGTTCCGGAGCTACCGGACCGGCGGCGGGGATTCGCAGCTGCTGAACCGCACCAGGAACCTTCTAGAAGAAGCAATAAGCGGCCGCGCCGTAACATGCCTAATTTGCATCGGTTCCGTCAAAAGAGCCGATGCCATATGGACATGTGAACACTGCTACTGCTATTTCCACATATCTTGCATCCAAACTTGGGGTAATGACTGTGTCAGCGTCAAACCAAATGAAATTCAAGCGCCTATTAGTGTTTATGTAGCTAAGAAAGTAGAGTGGTGCTGTCCGAAATGTCGGCATTCGTACACCAAAGAGCAGATACCTAGGAGATATAGATGTTACTGCGGCAAGACTGATGATCCACCCGTCCATCCTTGGTTGATCCCTCATTCCTGTGGAGAGATATGTCAGAAGAGGATCTCTATCGGTGGTCACTGTATGCATCAGTGCCTCCTGCTGTGTCACCCCGGGCCGTGTCCACCGTGCCCGCAGACTGTCAACGGAACATGCCATTGCTCAAAAGAGACCAAATTAGTACGATGTAGCTCAAATAAATGGTCATGTGGCAAACCCTGTAAAAAGCTACTGCTCTGCAAGTCTCATAGATGTGAAAATGAATGTCACGAAGGAGACTGCCCTCCCTGCAGTTACACCAGCTTGCAGTCATGTGAGTGTGGTGCTGAAAAAGTCAAGAGACCATGCAATGATGTCAAATGGCAATGCCAAAAACCTTGCAACAAACCTTTTGACTGCGGCTACCATAAATGCGAAAAAGTATGCCATTCCGGTAGTTGCGGACCTTGCCCTAATACCGGTATGAGGTCATGTCCCTGTGGAGCTAATGAGAGATATGTTCAATGTCCTGATTTCATAGAAACCTGCCTTGGAACTTGCAATAGAAAGCATGAAGACTGTGAACACCGTTGCCCAGAGAAATGCCATAAAGGCCTCTGCCCACCATGCCAAGTGTTGATCCAAAAGAAATGCTATTGCGGAACACATGAAAGATCTCTGCCTTGCAGCAAAGAATTCAAATGCGAAACGAAATGCAGAGGAACCAGACCATGCGGAAAACATCCTTGTGCAAAGAAATGTTGCAACGGAAACTGTCCTCCATGTGAAAAAGTTTGCGACAAACCTCTTCAATGTGGTAGACACAAATGTACCACAATATGCCATCGTGGACCCTGCTATCCGTGCCCTAGAGAATCTAAAGTTACATGCAGATGCAAAGAAACATATGTCACTGTGCCCTGTGGCAGAGAAAGACATGTCAAACCACCCAAATGTAATCTACCTTGCAAGATAAAACATAAATGTGGACATATTGATGAAAACAAACATTCCTGCCATTTTGGAGACTGCCCTTTGTGCAAGGCTGTTTGTGAAAAGCCGTATCCAAAATGTGACCATTACTGCAAAGCAACCTGCCACAAGTTTGTACCGGTTGTTTTTAAACAAGTTGAAAAACCTGCTACACCATGGGATATACAGCCACCTAAGACTAAAATCATGGCTCTTGATTGTCCGCCCTGTGAAGCACCCGTATCAGTTACTTGTTTTGGAGAACACGAAACAGAACAGCAACCTTGCCACTCTGCTAATAGAAGACCCTGTGGCCGAGAGTGCGGGAAACCTTTAGCTTGCGGCAACCACTCTTGTACTCAACTCTGCCATCTTTATCAACCTGATCCTAACTTTCCAAATGTACCTTTTCTATGTAGACCATGTAACAAAGAATGCCAAGTACCCCGTCCAAAGAAATGTGCACACAAGTGTCCCAAACGTGCTTGTCACACAGGGGAATGTCCACCGTGCGAAATTCTAGAACGCATTCCATGCCATTGTGGACTAACAGAATTGTATTTACGTTGCAAAGAATTGTGCACTGCCTCAATAGACATGTTGTCTTGCAAACAGCAATGCCCTAAGAATTTAGAATGTGGCCATCGCTGTAAAAATAATTGCCACCCCGGGAAATGTGGAAACCAAGAATGCACGAAGAAAACTAAAGTGTATTGCCCGTGTGGAAACTTAAAGAAGGAAGCTCCATGTAATTTGGTAAAGAAAGGTGAAGCAAACATTGTCTGTGACCAGAGCTGTGAGGCTAAGAAGCTTGCATTGAAACttgagaaagaaaaagaaatacaaaaacagaaacaactagaagaagaaaaaaacagAAGAGAACTAGAAGAATATGAATGGAAATTGAGTggaaaaaagaagaagtataaaGAAAAGAAGATTATTGTCCAAGAGGATAACAGGAATTTTATACAAAAGTACTGGCTTCTCATTCTTTCAAGTTTGGTTTTAATAATTTCTGGTGTTTATTTAGTATccaatgtttaa
- Protein Sequence
- MSRKYRDAAAKLQQNVQRHLQEMKELSSSDDEDPYESNVLETVFRSYRTGGGDSQLLNRTRNLLEEAISGRAVTCLICIGSVKRADAIWTCEHCYCYFHISCIQTWGNDCVSVKPNEIQAPISVYVAKKVEWCCPKCRHSYTKEQIPRRYRCYCGKTDDPPVHPWLIPHSCGEICQKRISIGGHCMHQCLLLCHPGPCPPCPQTVNGTCHCSKETKLVRCSSNKWSCGKPCKKLLLCKSHRCENECHEGDCPPCSYTSLQSCECGAEKVKRPCNDVKWQCQKPCNKPFDCGYHKCEKVCHSGSCGPCPNTGMRSCPCGANERYVQCPDFIETCLGTCNRKHEDCEHRCPEKCHKGLCPPCQVLIQKKCYCGTHERSLPCSKEFKCETKCRGTRPCGKHPCAKKCCNGNCPPCEKVCDKPLQCGRHKCTTICHRGPCYPCPRESKVTCRCKETYVTVPCGRERHVKPPKCNLPCKIKHKCGHIDENKHSCHFGDCPLCKAVCEKPYPKCDHYCKATCHKFVPVVFKQVEKPATPWDIQPPKTKIMALDCPPCEAPVSVTCFGEHETEQQPCHSANRRPCGRECGKPLACGNHSCTQLCHLYQPDPNFPNVPFLCRPCNKECQVPRPKKCAHKCPKRACHTGECPPCEILERIPCHCGLTELYLRCKELCTASIDMLSCKQQCPKNLECGHRCKNNCHPGKCGNQECTKKTKVYCPCGNLKKEAPCNLVKKGEANIVCDQSCEAKKLALKLEKEKEIQKQKQLEEEKNRRELEEYEWKLSGKKKKYKEKKIIVQEDNRNFIQKYWLLILSSLVLIISGVYLVSNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00178850; iTF_01501768; iTF_00275950; iTF_01404021; iTF_01337463;
- 90% Identity
- iTF_01501768;
- 80% Identity
- -