Kina018016.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:17802836-17812702[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 5.6e-05 0.0051 17.6 4.5 1 21 192 212 192 214 0.95 2 30 0.0022 0.2 12.6 0.6 2 20 242 260 241 262 0.93 3 30 4.7e-05 0.0043 17.8 0.4 3 23 289 310 287 310 0.96 4 30 0.022 2 9.4 0.8 1 23 360 382 360 382 0.97 5 30 0.0024 0.22 12.4 0.2 1 23 402 424 402 424 0.96 6 30 0.00013 0.012 16.4 3.1 2 23 464 485 463 485 0.96 7 30 0.00028 0.026 15.3 2.3 2 23 528 550 528 550 0.97 8 30 0.00029 0.027 15.3 1.5 1 23 600 623 600 623 0.97 9 30 0.00028 0.026 15.4 0.2 1 23 679 701 679 701 0.97 10 30 0.006 0.55 11.2 5.7 2 23 713 734 712 734 0.96 11 30 0.03 2.8 9.0 1.7 2 23 746 767 745 767 0.96 12 30 0.0038 0.35 11.8 0.7 1 23 777 799 777 799 0.98 13 30 0.0075 0.68 10.9 5.9 1 23 828 850 828 850 0.96 14 30 0.0011 0.097 13.5 5.5 1 23 861 883 861 883 0.98 15 30 3.4e-05 0.0031 18.2 1.4 1 23 891 913 891 913 0.97 16 30 0.0022 0.21 12.5 0.1 2 23 933 955 932 955 0.97 17 30 8.8 8e+02 1.2 0.2 1 10 973 982 973 991 0.93 18 30 0.09 8.2 7.5 3.7 1 23 1002 1024 1002 1024 0.97 19 30 0.001 0.096 13.6 1.8 2 23 1035 1057 1034 1057 0.95 20 30 0.00059 0.054 14.3 0.3 2 23 1080 1101 1079 1101 0.95 21 30 6.1 5.6e+02 1.7 5.9 2 23 1144 1166 1143 1166 0.94 22 30 0.0018 0.16 12.8 0.2 2 23 1182 1203 1181 1203 0.95 23 30 1.3 1.2e+02 3.8 4.2 5 23 1213 1231 1210 1231 0.94 24 30 0.011 0.97 10.4 0.8 2 23 1242 1264 1241 1264 0.95 25 30 2 1.8e+02 3.3 3.5 2 23 1281 1299 1281 1299 0.89 26 30 0.16 15 6.7 1.2 2 21 1303 1322 1303 1323 0.93 27 30 1.3 1.2e+02 3.8 0.6 2 23 1372 1393 1371 1393 0.93 28 30 0.0087 0.8 10.7 0.6 2 23 1404 1426 1403 1426 0.94 29 30 9.4 8.7e+02 1.1 1.0 2 23 1442 1460 1442 1460 0.77 30 30 1.7 1.5e+02 3.5 2.5 2 20 1464 1482 1463 1484 0.92
Sequence Information
- Coding Sequence
- ATGGCACTCAAGCTTGGAAAATGCAGACTATGTCTCAAGCTCGGCGACTTCTATTCCATCTTTACGGTGGACAACAATTTGCAACTTGCCGAAATGGTTATGGAATGTGCGCGGGTTAAAGTATATGAAGGCGACGGACTTCCAGATAAAATTTGCAGTGAATGCATTCAAAAACTCAGTAGTGCCCACATATTTAAACAACAATGCGAGCGTTCTGATCAAGAATTGAGGCGCAATTATGTGCCTCCACCAGGCTTTAGTTCACCAACACCACCAAATAGACAGAGCAGTGATTCAGCTTTTTCGTCGCAAACTGAAGTTTCTAAACCGTCATCATCAAGCGAGAGCAAAGTAACACCGGTCAGTAGAGCTCGCAAGCGAAGCGGAGATAGTGTCGATGATGCATCCATAAGCAGCCGCTCTCATGATTACCGACCAGGAAGTTCTAAACGCGTTGATCAATTACGAATGTCTCAAAAGAAACCCAGACTTTCAACAAATTCGGATTCTGATTACGATGACAACAGTGCTTCATTTTATTCCGCTGAGACTGACTCTGATGAACCGTTACTTCACAAATGTAAACAATGCGGCAAAGCATTCAGGACATCAAACAGTTTAGTAGCTCATATGAAATGTCATAAAAGAAAAAGTGCGTTAAATAATACTTCTTTTGAATCACCAAAAGAAATAAAAGATGCTGCAGATGAAGAAGATAAACTTTCATGTGACAAATGCGGAAAAGATTTCAAATTAAAAATAATGCTAAAGCGCCATCATGATATCTGCGGTAAATCGCCTCGAAAAGAGTTAATGGTGTCCTTAGAGCCAATCGACGTTATACAAAAAGTGGTAAAAATAGATTGTCAATTGTGTACAACAAAGTTTAAAACAATTGAGAACTTGGAGAAACATATGAGAGTAGTGCATGCAGCTGTACTGAAAAGGGATGATTTAATGAGTAATGAAAATGGGAAAAATGTTGTTCCTTGTTTTTATTGTGGTCTTCCATTTGACGATTATTACGTCCATAGCGCTCACTTCAACGTGTGTCCTCAAAAGACTAACGTTACCACTTTCGAGTGCCCTGTTTGTGCAAAAGTAGTTACAAAAAAAGGATGTTATTTCTTACATCTTAAAGCGCATTTTTTTCCATTAACTTCGACTAAACCTGTAGTGGAGGTACCTTCTAAACAGGAAAATTTTCAGTGCCGTATGTGTAGTAAGAAATTGCCTAGTCAAGATTCGTTAATAACTCATCTGGCTGCACACATGTCTCATATAGAAGAAGCTGATGACGGTGGCGACGAAGAATCTAGAGCAAGTACAATAGACGATTCAGCATCAGTACATTCTGAATACAACGCTAATATTTCAAGTGGACCCTTAAAATGTAAAACTTGTGATAAATCATTTAAATATAAGAAATCTCTATTGACACACGAGGAGAAACATAACCATGGTGGAATAAAAATGGAAACACCGGACAAGAACAATTCTACAAATTTGTTAAATGAAACTACTACTTCCATGAACCAATACGAATCGGAATCTAGTCAAGACGAAGGCGAAGAGGATAACACTTGTGATATTTGTGAAAAACAGTTTTCATATAAAAGACTGCTTCTGCAACATAAGAGGACTAAACATCCCATGACAGCAGGATATAAGCGAGCCAAGATCAATTTAAAAGATTGTTCTGTTCGGTGTTTGATATGTGATATTGAAATGAAAGTAAGTGCGATTAACGAACACAATCAGACACATATATCTGTTAACATGAAACCGAGAAATTTGTACACATGTAGGGAATGTGAACAACAATTTAAGAGCTGTAGTGCGCTGGCGAATCACATCAAATTGGTACACAGGCTAAAGCAGCCGCAACCTAAAATTAATGTACCGCCGGCGGATTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGACGAGCTCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGCCAATGATGGCACGCCCTTGGTCAACATGAGCGGCTTTACATGCCCTATTTGTAATAAACAATTGCCAACATTGATATCTCTTAAGAGGCATGTCAACTGGCACAATCATGTTGGTAAAAGTTTGGAGAAGCAGTTAGAATGTTTTGTTTGTAAGGAGACTTTCCGGTTTCAGTGTCATTATAAGATCCACATGCGTGAACATTATAATGACACTAATCTCGATCCAAAACTGCTGACTTGCTCCATTTGCAATCGTAAGAGCAAGCATCTTCGTGCGGCCCAGGCGCACATGAATTACCATAAACAAACACGTTTTAAAAACAAAGATTACGAGTGCTCGATTTGCAAGAGAGTATTCCAATATCGCAAAGTTTATCTCTCACATATGGCAATACATTACAAGCGTGGCGAAAGCGCTAATAATACTATCGTGGGGTCTGTGCTACCCAACTCAGTGGACAAAAACATATATGACGGTACACATACCTGTCACCTTTGTGGCAAAATATGCGATTCAGAAAATTCTCTGAAACACCATATAATTTGGCATAAGTCTAAGACTTCCCTATTTGGAGCTCGTCATGAGTGTCATATATGCAATTTGCAGTTCACAAATAAGAGAAGGCTTGAGCTTCACACCAGAACACATTTTGAAGACGATAATGGACCATTTAAATGTCATATTTGTGGGAAAGGGTTCATAGTTGAAGATTATTATAAGAGGCATGTAAAAGGGCATAATTTTGATCACCAGTCGCATAAAAAGCGTATAGAGAAGCTCAGGAAAAATAAAGTGAAGTGTCCAATTTGTGCTCGTTACTATCCAGACTTAGTAAAACTTATTCGTCATTTGCGACGGACCCATCCTGAGAGTAAAATGATAAAGGAAGATCCGGACGCACCACCTCCAAATTATTATTCTTGTAAATTATGTGCTAAAGTTTTCTTAGATGAGAGGAGATTACAATTTCATGAGGAAGCTCATCTACGGAAGCCAGAATTTTTCAAATGTAAATTCTGTGGTAAAAAGACCATATCATTGAAGAATCACAGAATCCATATTAAAGGTCATCTCACACAAAAATACATCGACAATCCATTGAAATGTCCGCATTGTGATGAAACGTTCATGCGTGGTTATGATCTGCATTACCATTTACGGGATGCACATGAAATTAATGAAACGTGGATAGAAGAACGGCGAAATCAGACATTGGACGGACCCTTAAAAGAGCTACAATGTTCCATTTGTTTCAAGGTTTTAGCCAGTAAAGGGAACTTTGAAAGGCATATAGATTATCACAACTCTCTTAGATGTAATTATTGTTTCGATTACTTTAGCTCTCTCAGATTCTTGGAGGGACATCTTGCATTCAGCTGTGACAAGAAGAAACTAATCGGAGACACTGAAATATACCCGAAAAAAGTTAAGTGCCATATTTGTTACAAAGCTTTCCATTTGCAAGTGAAATTGGATTGTCACTTGCGGACTCAACATGACATAAAAACATTTAAAGAAGCATCTGAAGGAAAACAGGAAATTGTTTGTGATTATTGCTTTAAAGTATTTGAAAATGAATATGCTCTAAGTACTCACAAGATCTACCACCGCACCATTGGTTACTACGGGTGTATATATTGTAATAGGAAGTTTAATACGATGACATTGTATAGGAAACACAAAAATCATCATTTCTCCCAACTAAACGTCGATAATCCAACGAAATGCGAACATTGTGATGAGACATTTGTTGCTTTTAGAGAAATGATATATCATATGAGAGATGTTCATGGGGACGACAAAGAATGGGTTGTTTTACCAAAAGAATCTATTGAAGAAAAATGTAATATTTGTCAGAAAATATTCTTTAATTTACACAGACATTTAGATTATCATGAAGAAAATAGGTGCAAAAAATGCGGCGAGTACTTCTTTTCTCGGGCAGATTACGATAACCACCTTTGTGCGATCGATAGCGATGAAGAAGTCACTGAATCTAACACGAATGGCGTTCGGGCTATATACGAAGAATGTAGCTTCTGCTTCAAACCTGTTACCAGAAAAAACTCAAAGCGTTTACACGATCAAATCCACAGAGGTTCTGGTTCTATATCGTGCCGTTTCTGTGCTCTTAAATTTAAAACTATGGACGCCTTCAACATTCATGCGTTTTCACATAGAAGTAGAAAATATAAGAAAAAACCAATCAAATGTCGCAAGTGTGGAGAACAATTCGTCAAGTATGGTCCATTCATAAAACATATGAAGTTTGTTCATAAGTGTTCCAAGAAGCTTCATTACAGAGCCACTGTGATGCCTGAGAAGTGCGTCGTATGCAATGAAGATTTTCCTAATTTACATAATCACTACCGCGCACATTTGCAAAATCAATGCCAACAATGTCTCAAATATTTCACTTCATCCAAAGCGTTTTCTCTCCATGAATGCAATAAAGAGGATTCAGATCCATCAAAAGTCTTTATATGTGATGCTAACTTACCAGCGCTCATTAATTCCTATATACCGAAAGACGAAAAAGATGATGAGAAATATTATGGTCACGAGGACGAAGAGGAAGAAGAGGATGAGAGACTTAATCTAGGGACAGTGACTCAGGATGAAGATAGTCAAAATTCTATCAATATTGACGAAGGAAAGGTGCATGATATGGTGCACGCTCCAATTATATCCGACGTGTTGTCGCTTTATAAGAAGAAAGATATTAAAACCAAACGTGAAAATGAAAGTGATGAACAGAATAGTGTTAGTGGTAACATTGTGGTTTTAACTGATGAAGATTCTATAGGTTTTGAAGATAATGTACCTGTTATAACAATAGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKVYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSSPTPPNRQSSDSAFSSQTEVSKPSSSSESKVTPVSRARKRSGDSVDDASISSRSHDYRPGSSKRVDQLRMSQKKPRLSTNSDSDYDDNSASFYSAETDSDEPLLHKCKQCGKAFRTSNSLVAHMKCHKRKSALNNTSFESPKEIKDAADEEDKLSCDKCGKDFKLKIMLKRHHDICGKSPRKELMVSLEPIDVIQKVVKIDCQLCTTKFKTIENLEKHMRVVHAAVLKRDDLMSNENGKNVVPCFYCGLPFDDYYVHSAHFNVCPQKTNVTTFECPVCAKVVTKKGCYFLHLKAHFFPLTSTKPVVEVPSKQENFQCRMCSKKLPSQDSLITHLAAHMSHIEEADDGGDEESRASTIDDSASVHSEYNANISSGPLKCKTCDKSFKYKKSLLTHEEKHNHGGIKMETPDKNNSTNLLNETTTSMNQYESESSQDEGEEDNTCDICEKQFSYKRLLLQHKRTKHPMTAGYKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNMKPRNLYTCRECEQQFKSCSALANHIKLVHRLKQPQPKINVPPADLADFCEVVVTKAEPLDELQSHNGFGEVSANDGTPLVNMSGFTCPICNKQLPTLISLKRHVNWHNHVGKSLEKQLECFVCKETFRFQCHYKIHMREHYNDTNLDPKLLTCSICNRKSKHLRAAQAHMNYHKQTRFKNKDYECSICKRVFQYRKVYLSHMAIHYKRGESANNTIVGSVLPNSVDKNIYDGTHTCHLCGKICDSENSLKHHIIWHKSKTSLFGARHECHICNLQFTNKRRLELHTRTHFEDDNGPFKCHICGKGFIVEDYYKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKGHLTQKYIDNPLKCPHCDETFMRGYDLHYHLRDAHEINETWIEERRNQTLDGPLKELQCSICFKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTQHDIKTFKEASEGKQEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWVVLPKESIEEKCNICQKIFFNLHRHLDYHEENRCKKCGEYFFSRADYDNHLCAIDSDEEVTESNTNGVRAIYEECSFCFKPVTRKNSKRLHDQIHRGSGSISCRFCALKFKTMDAFNIHAFSHRSRKYKKKPIKCRKCGEQFVKYGPFIKHMKFVHKCSKKLHYRATVMPEKCVVCNEDFPNLHNHYRAHLQNQCQQCLKYFTSSKAFSLHECNKEDSDPSKVFICDANLPALINSYIPKDEKDDEKYYGHEDEEEEEDERLNLGTVTQDEDSQNSINIDEGKVHDMVHAPIISDVLSLYKKKDIKTKRENESDEQNSVSGNIVVLTDEDSIGFEDNVPVITIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079240;
- 90% Identity
- iTF_00824952;
- 80% Identity
- -