Basic Information

Insect: Iselma pallidipennis
Gene Symbol: L
Assembly: GCA_037464855.1
Location: JAZBHA010000654.1:26280-34177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.012 0.51 10.6 3.4 1 23 71 93 71 93 0.99

2 21 0.08 3.5 8.0 5.8 1 23 99 121 99 121 0.97

3 21 4.3e-06 0.00019 21.4 3.2 1 23 127 149 127 149 0.99

4 21 0.00018 0.008 16.3 0.3 1 23 155 177 155 177 0.99

5 21 0.00012 0.0051 16.9 1.4 1 23 199 222 199 222 0.95

6 21 0.033 1.4 9.2 0.1 2 23 249 271 248 271 0.95

7 21 0.001 0.045 13.9 0.3 1 23 301 324 301 324 0.98

8 21 0.0098 0.42 10.8 0.0 3 23 432 452 431 452 0.97

9 21 0.0038 0.17 12.1 2.4 3 23 462 483 460 483 0.86

10 21 0.0014 0.062 13.5 0.4 1 23 488 511 488 511 0.94

11 21 0.0011 0.05 13.8 2.3 1 23 575 598 575 598 0.95

12 21 2.1 89 3.5 2.5 1 23 637 660 637 661 0.89

13 21 0.00029 0.013 15.6 2.6 2 23 672 693 671 693 0.97

14 21 0.00096 0.042 14.0 1.1 1 23 702 724 702 724 0.98

15 21 4.1 1.8e+02 2.6 0.8 3 23 733 753 732 753 0.94

16 21 2.5 1.1e+02 3.3 1.0 3 13 801 811 799 813 0.87

17 21 1.8 76 3.7 0.2 1 23 853 875 853 875 0.90

18 21 0.0066 0.29 11.4 0.5 2 23 884 905 883 905 0.95

19 21 0.0072 0.31 11.3 0.0 1 23 913 935 913 935 0.96

20 21 0.024 1 9.6 1.6 1 23 942 964 942 964 0.97

21 21 1.2 53 4.2 0.3 3 21 984 1002 983 1003 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.012	0.51	10.6	3.4	1	23	71	93	71	93	0.99
2	21	0.08	3.5	8.0	5.8	1	23	99	121	99	121	0.97
3	21	4.3e-06	0.00019	21.4	3.2	1	23	127	149	127	149	0.99
4	21	0.00018	0.008	16.3	0.3	1	23	155	177	155	177	0.99
5	21	0.00012	0.0051	16.9	1.4	1	23	199	222	199	222	0.95
6	21	0.033	1.4	9.2	0.1	2	23	249	271	248	271	0.95
7	21	0.001	0.045	13.9	0.3	1	23	301	324	301	324	0.98
8	21	0.0098	0.42	10.8	0.0	3	23	432	452	431	452	0.97
9	21	0.0038	0.17	12.1	2.4	3	23	462	483	460	483	0.86
10	21	0.0014	0.062	13.5	0.4	1	23	488	511	488	511	0.94
11	21	0.0011	0.05	13.8	2.3	1	23	575	598	575	598	0.95
12	21	2.1	89	3.5	2.5	1	23	637	660	637	661	0.89
13	21	0.00029	0.013	15.6	2.6	2	23	672	693	671	693	0.97
14	21	0.00096	0.042	14.0	1.1	1	23	702	724	702	724	0.98
15	21	4.1	1.8e+02	2.6	0.8	3	23	733	753	732	753	0.94
16	21	2.5	1.1e+02	3.3	1.0	3	13	801	811	799	813	0.87
17	21	1.8	76	3.7	0.2	1	23	853	875	853	875	0.90
18	21	0.0066	0.29	11.4	0.5	2	23	884	905	883	905	0.95
19	21	0.0072	0.31	11.3	0.0	1	23	913	935	913	935	0.96
20	21	0.024	1	9.6	1.6	1	23	942	964	942	964	0.97
21	21	1.2	53	4.2	0.3	3	21	984	1002	983	1003	0.94

Sequence Information

Coding Sequence: ATGAAAATGTTCTTCAAAGGTAACAGTAGTCGACTGGAGtcgttaattgaaaaaattcaatcaacaCGAGAAGAATTCAAAATACCAGTGGCCGAGGAGGAAACAGCTGGCAGTTCAGGTTCTGGTGGTTCAGGAGAAACTGTACCAGGTTTCGATGATCTTGTTAATTCAGAAGAACCAAAGAGTGATCAAGAACCGAAATCCGGCCCGTATAAATGCACGGTATGTGGATCAAACTATTTTAAAGAAAAGCATCTCAGGGACCACGAACAGACTCATACTGATCATCTTCAGTTCACTTGTTCCTACTGTCCGAGACTTTTCAAACATAAACGTTCCAGAGATCGACACACCAAACTACACACTGGCGACAAGAAATACAAATGTCAACAATGTGAATCAGCCTTTTCAAGAAgCGATCATTTGAAAATACACATGAAAACTCACGACAGTCGAAAACCTTACAAATGTGGCACGTGCAATAGGGGTTACAATACAGCCGCTGCCCTTTCCTCCCATCAACAAAGCCATTTGAAACAAGAATCAAGATCCGGAAGTCGGACAAGTGGTGGAAGTACCCCAAGTCCTGGACTTTTCCGGTGTAATCATTGTACGGAAACATTCGGCAAAGCTGATCTATTGCAGacACATATGACATTGGTGCATAGTGATACCGATTCGACATTAAGTCAAACACCGGAACCGAATTCGGAATATCAAACAcaaattgaagatttaaaaatagtttgtATGTATTGTTCGAAAGAATTTCCAAGTTTGGAATTGATGTATCAACATACGAATATAGCGCATAGAGATGTACCGAATGGTGCAACATCATTGCAATCACCGGTTGCTAATTCGCCTAAGcaagaaatttatcaaaatggTAGTCCAACATACCCATGTGATCGTTGTACAATGCAATTTGATTCagtacaaaatttaaaagatcACATCAATACCGTCCATTGGCGACCAACAATATCACCAAATCCAATTAATTATGGTACATcgcaaatattaaatatagaaaaacaatatacaGCATTCCAGACACAACCAACAGATTTAAGtcgtaaaaagaaaaaggatgaaatcattgaaaaaacaatattaacgaaaaaaacaaaaaaagataatcTATCATCGCCGAACACATTAAGTCCATATGATACAAATGATAAACCATGTATATGTTCTTGTTGTTATGCCCAATTAccaaattttaaaagtttcttAAATCATATGGAAACACATATGATATCAgcaaataattcattattaggTTTTTGTCCGGTTTGTGGTGAACCAGGACGGGATCCTGTTAGTTTTACAAATCACATATTTAGCCATGCTATTGCTCAAGTACCTGGACGTTGCTGTTATGCTTgtaaaaaatcatttgaacGTTCTgatgaattacaaaaacatttatttgatgttcatgttgtttctgtttttaaatGTTCGATTTGTAATGAAATATTCGACACGAAAATATCGATGCAGTTACATTTAGCAAATAAACATAGTGATGaatgtaaacattttaaatgttaCTTATGTACAAATCAAGTATTTCACGATCAATTATCAGCTGAATTGCATATATCTATGAAACATTACAATCAATTCACACCATGCGTTGGAACAAGTCAACTAATAAGGCCGCAATATCAAATCGAATTAGATGCAAGATTACGTGATTATGGATTCATATTTCAATGTACATTTTGTCAAAAAACATTCAAAGatcaatattcacaatataTTCATATTGTTAAGGAGCACAGTGAAAATAAAGaaGGTGATAAATTTATGGATCAAAATCCGTCCAGATCACCAAATTTCTTTTCGAAAATTCTCCAATCACCcgataaaaaattagaaacaacaTTAGATAACTACAATTGTGATACATGTAATCGTAATGATTTCAATACAGAAACCGATTTGCTAACACATAAAAAAGTCCACCAtccaaaatgtaaaattggtCCAGTTAGTTTACAATGTGCATATTGTAATGAATATTGTAAATCACgtaatgatttagaaaatcataTGAAAACACatcaaattaataatggtAAAGGTAAACATAAATGTAATATCTgtgatgaaatatttacatcaaCATTAACATTAGCCGATCATAAATTGACGCATTGTAAAATCGTTGAAGGTAATAATTGTGTCCAatgtaaaacaatattaaCTGATGAACAATCATTTTataatcatcaatatcaacataataatataccgACAAAATCTAATACACAAATATCATTACCAGctaattgtattatatgttGTCAGACATTACAAACAGATGTTGAAGTCAAATTACATGCGAAATTCCATTTGAAACACTTATTACAAAAAGAATGTTTATGCGGTGTTTGTAATAAAGTTTTCGACAGTCAAACTGGTCAAATTCTAACAAATTACGATAAAACAACAGATGGTTTAACGGTAATATTATGTAAAGATTGTAATACGAAAACGATAACAGATGAAAAGAAATTAACGAAAAGTGGTAATAGTCAATTTTCTTGTATACAATGTTCACAAACATTCGATAGTGAGAATGATGTCCAAAATCATGCTGTTGTACATATGATGAATGAAGGTGCCAATTTGGAATGTCGTTTATGTAAACAAgcattttcatcatcattaaaattacaaacacatttaattgaacataatttttatggaatgAATCAATATAGTTGTTATGTATGTTCATCTGTATTTACAGCAGCTAGTGGCTTACAAAATCATATAATTGGTCATGGTTTAGATAGTCGACCATATGAATGTAATCAATGTCAAATGAAATTCTTCTTTAGAGCTGAATTGGACAATCATCGATTCGTACATATGTCGAagcaaatttatattaatggtattgataataaaagttcacaatataaaatatgtaaatattgtagaaatacatatatggataattcattttatttagaaCATATAAATCAGTGCCCTTTTAAAATGAATCCAAAAAAAGAATACGATACCGGCgatattgacaataatattaaacaggAGTTAAATGATAACACGTCGGATATAACAACCGAAAAAGATGAGCAATAA
Protein Sequence: MKMFFKGNSSRLESLIEKIQSTREEFKIPVAEEETAGSSGSGGSGETVPGFDDLVNSEEPKSDQEPKSGPYKCTVCGSNYFKEKHLRDHEQTHTDHLQFTCSYCPRLFKHKRSRDRHTKLHTGDKKYKCQQCESAFSRSDHLKIHMKTHDSRKPYKCGTCNRGYNTAAALSSHQQSHLKQESRSGSRTSGGSTPSPGLFRCNHCTETFGKADLLQTHMTLVHSDTDSTLSQTPEPNSEYQTQIEDLKIVCMYCSKEFPSLELMYQHTNIAHRDVPNGATSLQSPVANSPKQEIYQNGSPTYPCDRCTMQFDSVQNLKDHINTVHWRPTISPNPINYGTSQILNIEKQYTAFQTQPTDLSRKKKKDEIIEKTILTKKTKKDNLSSPNTLSPYDTNDKPCICSCCYAQLPNFKSFLNHMETHMISANNSLLGFCPVCGEPGRDPVSFTNHIFSHAIAQVPGRCCYACKKSFERSDELQKHLFDVHVVSVFKCSICNEIFDTKISMQLHLANKHSDECKHFKCYLCTNQVFHDQLSAELHISMKHYNQFTPCVGTSQLIRPQYQIELDARLRDYGFIFQCTFCQKTFKDQYSQYIHIVKEHSENKEGDKFMDQNPSRSPNFFSKILQSPDKKLETTLDNYNCDTCNRNDFNTETDLLTHKKVHHPKCKIGPVSLQCAYCNEYCKSRNDLENHMKTHQINNGKGKHKCNICDEIFTSTLTLADHKLTHCKIVEGNNCVQCKTILTDEQSFYNHQYQHNNIPTKSNTQISLPANCIICCQTLQTDVEVKLHAKFHLKHLLQKECLCGVCNKVFDSQTGQILTNYDKTTDGLTVILCKDCNTKTITDEKKLTKSGNSQFSCIQCSQTFDSENDVQNHAVVHMMNEGANLECRLCKQAFSSSLKLQTHLIEHNFYGMNQYSCYVCSSVFTAASGLQNHIIGHGLDSRPYECNQCQMKFFFRAELDNHRFVHMSKQIYINGIDNKSSQYKICKYCRNTYMDNSFYLEHINQCPFKMNPKKEYDTGDIDNNIKQELNDNTSDITTEKDEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00929825; iTF_01566467; iTF_00813893; iTF_00814592; iTF_00987367; iTF_01366558;
90% Identity: iTF_01366558;
80% Identity: -