Basic Information

Gene Symbol
XBP1
Assembly
GCA_951213275.1
Location
OX577849.1:2370771-2372666[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.2 2.6e+03 -0.9 0.0 14 25 24 35 24 37 0.83
2 3 6.5e-17 8e-14 52.0 10.6 2 52 40 90 40 93 0.97
3 3 0.00014 0.17 12.5 1.4 33 55 85 107 84 110 0.92

Sequence Information

Coding Sequence
ATGAGTGCTCCAATCATCATTACGGTACCGAACAACTACTTGGTGGAGGATGATGGAGTTGTTGTAGACGTAGCACCTACACCATCACGGAAACGCAGGCTCGACCACTTGTCATGGGAGGAAAAAATGCAAAGAAAGAAGCTAAAGAACCGCGTCGCGGCTCAAACTTCACGAGACCGGAAAAAGGCCAAGATGGACGAGATGGAGTATAGAATAAGATCTTTGGAAGAAAGAAATGAGAAGTTGGTGGATGAGGTAGCGAGTTTAAAAGCACTGAACGAGCGCCTGCTAAACGAGAACACATCGTTACGCAACGAGGCCGCGGCGCAGCCCGTCCCAGGAGCCCCAGGACCAGCAGCGTCCCCTCAGCAGAAGGTGGGGCTCCCGGCGGCGGGTCGCGCGGCGCGACTCCTGCTGGCGATGTGTCTCTTGCAGAGCTGTTCGACCACCTCGACTCGCCAGAATACCTTGATACGCTTCACCAACTCGCAGACACACTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAAAGGATCAAAATGAGTCAATCCGGGACACTGGAGAGTGCCCTAAAGGAGCTAAAGTGGTGGGGTCCGCAACAGAGTTCTTGGAATCCAGTGGAAGTCCAATCCTAA
Protein Sequence
MSAPIIITVPNNYLVEDDGVVVDVAPTPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEYRIRSLEERNEKLVDEVASLKALNERLLNENTSLRNEAAAQPVPGAPGPAASPQQKVGLPAAGRAARLLLAMCLLQSCSTTSTRQNTLIRFTNSQTHSSKKLMQVLQERIKMSQSGTLESALKELKWWGPQQSSWNPVEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00835294;
80% Identity
-