Basic Information

Gene Symbol
Xbp1
Assembly
GCA_958496205.1
Location
OY292398.1:13321460-13323594[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 3e+03 -1.0 0.0 14 25 24 35 24 36 0.83
2 4 1.9e-17 2.9e-14 53.5 6.5 2 52 40 90 40 92 0.97
3 4 9.4e-05 0.14 12.9 1.5 32 55 84 107 82 109 0.91
4 4 7.1 1.1e+04 -2.7 0.1 43 48 173 178 166 194 0.57

Sequence Information

Coding Sequence
ATGAGTGCTCCAATCATCATAACGGTACCAAACAACTACTTGGTGGAGGATGATGGAGTGGTTGTAGACGTAGCACCAACACCTTCACGGAAACGCAGGCTGGACCATTTGACATGGGAGGAAAAAATGCAAAGAAAGAAGTTGAAGAACCGCGTTGCGGCACAAACTTCTCGAGACCGGAAAAAGGCCAAGATGGATGATATGGAGTATAGAATCCAAACTTTAGAAGATAAGAACGACAAGTTGGTAGATGAGGTAGCGAGTCTAAAGGCGTTGAACGAGCGTCTGCTAAACGAGAACACATTGCTACGCAGAGAGGCGGCGGCGCGGCCCGTCCCAGGAGCCCCAGGACCAGCAGAGTCCCCTCAGCAGAAGGTGGGGCTCCCGGTGGCGGGCCGCGCGGCGCGTCTCCTGCTGGCGATGTGTCTCTTGCAGACCTGTTCGACCAACTCGACTCGCCAGAATACCTTGACACGCTTCACCAACTCGCAGACACACTCTTCAAAGAAATTGATGCAACTGCTGCAGGAAAGAATCAAAATGAGCCAATCCGGGACACTCGAGAGTGCGCTAAAGGAGCTCAAGTGGTGGGGTCCGCAACAGAGTACTTGGAATCCAGTGGAAGTCCAATCCTAA
Protein Sequence
MSAPIIITVPNNYLVEDDGVVVDVAPTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDDMEYRIQTLEDKNDKLVDEVASLKALNERLLNENTLLRREAAARPVPGAPGPAESPQQKVGLPVAGRAARLLLAMCLLQTCSTNSTRQNTLTRFTNSQTHSSKKLMQLLQERIKMSQSGTLESALKELKWWGPQQSTWNPVEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00837210;
80% Identity
-