Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949358125.1
Location
OX442326.1:18245326-18247499[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.36 3.6e+02 2.0 0.0 14 25 24 35 23 37 0.89
2 3 2.5e-17 2.5e-14 53.7 6.5 2 52 40 90 39 92 0.97
3 3 0.00029 0.29 11.9 1.7 33 55 85 107 84 109 0.92

Sequence Information

Coding Sequence
ATGAGTGCTCCAATCATCATAACGGTACCAAACAACTACTTGGTGGAGGATGATGGAGTGGTTGTAGACGTAGCACCAACAACCTCACGGAAACGCAGGCTCGACCACTTGACATGGGAGGAAAAAATGCAAAGAAAGAAGTTGAAGAACCGCGTTGCGGCACAAACTTCACGAGACCGGAAAAAGGCCAAGATGGATGACATGGAGTATAGAATTCAAACTTTAGAAGATAAGAATGACAAGTTGGTAGATGAgGTAGCGAGTCTAAAAGCGTTGAACGAGCGTCTGCTAAACGAGAACACATTGCTACGCAGAGAGGCGGCGGCGCGGCCCGTCCCAGGAGCCCCAGGACCAGCAGAGTCCCCTCAGCAGAAGGCGGGGCTCCCGGTGGCGGGCCGCGCGGCGCATCTCTTGCTGGTGATGTGTCTCTTGCAGAGCTGTTCGAACAACTCGACTCGCCAGAATACCTTGACACGCTTCACCAACTCGCAGACACACTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAAAGAATCAAAATGAGCCAATCCGGGACGCTCGAGAGTGCACTGAAGGAGCTCAAGTGGTGGGGTCCGCAACAGAATACTTGGAATCCAGTGGAAGTCCAATCCTAA
Protein Sequence
MSAPIIITVPNNYLVEDDGVVVDVAPTTSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDDMEYRIQTLEDKNDKLVDEVASLKALNERLLNENTLLRREAAARPVPGAPGPAESPQQKAGLPVAGRAAHLLLVMCLLQSCSNNSTRQNTLTRFTNSQTHSSKKLMQVLQERIKMSQSGTLESALKELKWWGPQQNTWNPVEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00835294;
90% Identity
iTF_00837210;
80% Identity
-