Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292395.1:37482196-37484199[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.8e-05 0.0028 18.7 3.8 1 23 69 92 69 92 0.97

2 17 0.007 0.51 11.6 5.1 1 23 101 124 101 124 0.97

3 17 0.023 1.7 10.0 0.4 2 23 137 159 137 159 0.97

4 17 0.0049 0.36 12.1 2.1 1 23 168 191 168 191 0.96

5 17 0.00014 0.01 17.0 2.7 1 23 203 226 203 226 0.96

6 17 0.00018 0.014 16.6 1.2 2 23 247 269 246 269 0.97

7 17 0.00016 0.012 16.7 1.8 2 23 279 301 278 301 0.96

8 17 5.2 3.8e+02 2.6 3.1 3 20 307 324 306 326 0.92

9 17 0.0017 0.13 13.5 1.4 2 21 331 350 330 353 0.94

10 17 4e-05 0.003 18.6 3.0 3 23 363 384 362 384 0.97

11 17 0.00014 0.01 16.9 3.6 1 23 389 412 389 412 0.96

12 17 9.3e-05 0.0069 17.5 0.3 1 23 424 447 424 447 0.96

13 17 0.0097 0.71 11.1 0.8 1 20 467 486 467 490 0.91

14 17 3.1 2.3e+02 3.3 3.2 12 23 506 517 496 517 0.76

15 17 0.0081 0.6 11.4 2.0 2 23 523 544 522 544 0.97

16 17 0.015 1.1 10.5 0.2 1 23 609 631 609 631 0.97

17 17 0.08 5.9 8.3 1.9 1 23 637 660 637 660 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.8e-05	0.0028	18.7	3.8	1	23	69	92	69	92	0.97
2	17	0.007	0.51	11.6	5.1	1	23	101	124	101	124	0.97
3	17	0.023	1.7	10.0	0.4	2	23	137	159	137	159	0.97
4	17	0.0049	0.36	12.1	2.1	1	23	168	191	168	191	0.96
5	17	0.00014	0.01	17.0	2.7	1	23	203	226	203	226	0.96
6	17	0.00018	0.014	16.6	1.2	2	23	247	269	246	269	0.97
7	17	0.00016	0.012	16.7	1.8	2	23	279	301	278	301	0.96
8	17	5.2	3.8e+02	2.6	3.1	3	20	307	324	306	326	0.92
9	17	0.0017	0.13	13.5	1.4	2	21	331	350	330	353	0.94
10	17	4e-05	0.003	18.6	3.0	3	23	363	384	362	384	0.97
11	17	0.00014	0.01	16.9	3.6	1	23	389	412	389	412	0.96
12	17	9.3e-05	0.0069	17.5	0.3	1	23	424	447	424	447	0.96
13	17	0.0097	0.71	11.1	0.8	1	20	467	486	467	490	0.91
14	17	3.1	2.3e+02	3.3	3.2	12	23	506	517	496	517	0.76
15	17	0.0081	0.6	11.4	2.0	2	23	523	544	522	544	0.97
16	17	0.015	1.1	10.5	0.2	1	23	609	631	609	631	0.97
17	17	0.08	5.9	8.3	1.9	1	23	637	660	637	660	0.97

Sequence Information

Coding Sequence: ATGGACGACGGTGATCCTGAGAACAACGAAAACAGCCAACCAGAACCCTTCGTCAAATATGGACAACAGAACAAGGAGGCTGTTCTGCTTACATTCGAGAGTGTCATTAATGACAAAATCCTCTACGGAGAACCTATAGACTCCATAGAGGATGAGTTCGGTAATGACGACCAAATTGACGAGCCCCCAGAACTAGCCATGTCATTCATGTGCAAAATCTGTCATTTAGTCTTCAAAACCCAAAAGACTCTAGTCCAACATCAAAAAAGGATGCACAAAAAGTTCAGACGGTCCTTCAAGCACAAATGCGAGCATTGTGGAATGCAATATGAATTCAAGAACAGCTTAGAAGCTCATAAAAAGAGAAGGCATTCTCCCAATTCTGTCATAGACGACATGAAAGAAAGGACTTGTGACATATGTGCGTTAGTCTTCAAAGGGATAAATCGACTACGCATGCATATGCGAAGAACCCATGGTTCCTTCGAAGATGCTTTTAAACATGTCTGCCAAGATTGCGGACTGACATATGACAAGACACAAAGTCTACTAGTCCATCGTAAAAGAAAACATGAATCTGTGAAAAAACCGAAAGTAAACCAATGGTTTAACTGTATGTTCTGCCCGAAAGTCTTCACTCGCAGAGAAACATATACAAGGCATGTACAAAGAAAGCATAAAGTTGATGATGATGTAAAAGGTAAAATTAAATCAGAAAACCCTGAAGTCGGTGAAACGACTTGCAAGTACTGTAGTTTAGTTTTCTCTTCTGTGAATTACTTGAACTGGCATTTAAGACGGAAGCATAACGTTAAAATAGAGGACTACAAGTTGAAATGTAAGATTTGTAACCTGTCGTATAATAAGGTTGAAAGTCTAAAACGGCATATAAAGAGAAAACATACTCATGAGAACTATTGCAGTGTGTGCTGTAAGCAATTTACTAGTAAAATAACGTATATGAATCACACACATGTGAAGCAAGTGCAAGAATGCAGTctttgcgggcaaatttttgCACACCAAGGCGGCTTAGCTAAGCACCTACGATGCACACACAAAATCGAAAGTCCAGCTACAGTATTCTGTCATATATGTAACAAAGGTTTTTACAGTAAGAAGTATTTAAAATCTCATATGATACGGGTGCATTTTAAAGTTACATACCATTGTAAGTTGTGCGATAAAAACTTTAAAGCGAAAGAGAGTTACCGTAGGCATATGATAGTGAAACATCCTAATGATAACGATCTCGAAGTAGGACCGAAACATATGTGCGAGAAATGTCCTGAAGGGTTTAGAAATGAGTTCGAATTAGCGAAACATATTAATATAGTGCACAACGAACCTGAATTTCctgaaataaagaaagaagaagacgaTTTAATCAAAACTTCTTTTAAATGTACTAAATGTACAGATGAATTTGCTACCTGGGAGCAATTACGGACTCATTTTGGTGAATCACATCACCTAACGGAGGAAGTCCAGTGCCAAATCTGTGGTGACCTAATGTCTCGATCGGACTTACAGAAACACATTAAAATCCACGACGAAATTGAAGTCCAATGCAAATACTGTGAATTTAAAACGAAAAACAAAGTCAGTATGACGCAACATTTGCTAAGACACAAGAATTCTGAGACTCTAAACTGTGATTATCCTCTATGCCGTTACAAGACTTTCTACGAAGATGCAATGTTGAAACATAAGAAGAAGCATGAAGCAAGTGCTAAGTTACAATGTGCTAGTTGTCCGTTTCAAACTATGAATAAGTATATACTTAGATATCACGAAGAGGCCCATGTGACGGGTAAGAAGCGATATTCCTGTGACCAGTGTGATTATGCTACTATACTGCCGGCTAACTTAGTACAGCATAAGTATAAACATTCCAACGAGAAGAGGTTTAAGTGTGAGGTGTGCCCGTTTGCAACTAAATATAATACGTCTTTAAGGTTTCATGTTAGGAAGAAACATTGTGATTTGCCTACTTTCAGGTAG
Protein Sequence: MDDGDPENNENSQPEPFVKYGQQNKEAVLLTFESVINDKILYGEPIDSIEDEFGNDDQIDEPPELAMSFMCKICHLVFKTQKTLVQHQKRMHKKFRRSFKHKCEHCGMQYEFKNSLEAHKKRRHSPNSVIDDMKERTCDICALVFKGINRLRMHMRRTHGSFEDAFKHVCQDCGLTYDKTQSLLVHRKRKHESVKKPKVNQWFNCMFCPKVFTRRETYTRHVQRKHKVDDDVKGKIKSENPEVGETTCKYCSLVFSSVNYLNWHLRRKHNVKIEDYKLKCKICNLSYNKVESLKRHIKRKHTHENYCSVCCKQFTSKITYMNHTHVKQVQECSLCGQIFAHQGGLAKHLRCTHKIESPATVFCHICNKGFYSKKYLKSHMIRVHFKVTYHCKLCDKNFKAKESYRRHMIVKHPNDNDLEVGPKHMCEKCPEGFRNEFELAKHINIVHNEPEFPEIKKEEDDLIKTSFKCTKCTDEFATWEQLRTHFGESHHLTEEVQCQICGDLMSRSDLQKHIKIHDEIEVQCKYCEFKTKNKVSMTQHLLRHKNSETLNCDYPLCRYKTFYEDAMLKHKKKHEASAKLQCASCPFQTMNKYILRYHEEAHVTGKKRYSCDQCDYATILPANLVQHKYKHSNEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836815;
90% Identity: iTF_00836815; iTF_00837816;
80% Identity: -