Iave016554.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_907269075.1
- Location
- OU026087.1:1550677-1560516[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.11 3e+03 -2.2 3.1 38 76 34 74 24 102 0.42 2 3 2.7e-77 7.5e-73 246.1 26.8 1 297 120 396 120 399 0.88 3 3 0.12 3.4e+03 -2.4 10.6 124 166 418 464 404 473 0.61
Sequence Information
- Coding Sequence
- ATGGGTCGTTTATCGGGAGCTGCGACTCCTGACAACAGCGACGAGGAGACCGGAGAGGCCTTCACCGATGGAGACTTCGAAGACAGCGACGATAACACTGTCGTTGAAAATAACGATAAAACTAATAACAATATAAACGAAACTGTTAACCAAGAAGTACAGAAGAAACTAACCAATGGCAACTCTTCGAAGTCTTCAGAATCGTCCCCGAAAGAGTCCAAAATAAATGGACGTAAGAACAGTGAACCTCATTCGAGTGATGCTGAAAGTCACAGTGGATTAGTTGATGGAAGAAGAGATTCTCATGGTGATCAAAGTCCTTCGATTGTCGGCATTCTTGGAAACCAACATAATCATGCTGAACAGCGCTTAGCAGCAAGACGCGCGGCGCGGGCCGAGGCGCGTGAGATCCGCATGCGGGAACTGGAGCGACAGCAGAGGGAGCAAGAGGATCATGCTGATAAGGCGTATGACATGTATGCTGAGACAGTAGGTCGCCGCGGGCCGCGGTTGGCGGCGCTCAGTCCGGCCGCTATCCACTCGCCGCGACGCAGTTCCGAGGACTCTGCAGACGATACATTCAGTGTTAAAGACTTAAGGCACGAGCTCAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATATTGAACGCGCAGTTGGATAACGACAAGGCTGCGCTCGGGTACCAGCTCGAACTGCTCAAGGACAGGATCGAGGAGCTGCATGAGGAGCATGCGCAGTTACAGCGGGAGCACCGTGAGAAATGTTCAGCGCATGAGCGTCTAAAGCGGGAGTATGTGGCCCTCGAGCGCGAGGTGAACAGCGCTCGGTCGGCCATCGTGGCGCGGGACCAGGCCGCCAACGACGCGGGGTATACGTTCGTAGAGGCGGGCGAGGGGGGGCAGGGAGACCGCGTGCCTGCCCTCGCGCTCGTCTCGCACGACGCGCAGAAACTACTCGACGATGCGGGGGAGGGCACGCTCGACGTGCGGTTGCAGAAGCTGGCTAGTTCGAAGCTGTCGTTGGAGTCTGAAGTTCGCAAGCTGAAGTTGCAGTTGAACGAGGAGCGAGCGGCGAGGCAGAACGGTGTCGCTAACCATCACGATGAGGACTATGAGAATGAATTGGAGACCTTGCGACGTGGTATTACGGAGGCGAAGGCGCGAGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCAGCTGCGGCCGCGAGACTCGACGCGCAGCTCACGAGGCTGCGGGCGCGGCAGGACCAGCACGACGACATGGAAGAGCAACTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCGCGAGAAGCCCTCAACCGAGTGGAGGAACTGGAGACGGAGAACAGCCACCTGACGAAGCGACTCGACAAGCTGAAGAACGCCAAGTCCGCCCTACTGAAGGACCTGTGA
- Protein Sequence
- MGRLSGAATPDNSDEETGEAFTDGDFEDSDDNTVVENNDKTNNNINETVNQEVQKKLTNGNSSKSSESSPKESKINGRKNSEPHSSDAESHSGLVDGRRDSHGDQSPSIVGILGNQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAAIHSPRRSSEDSADDTFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHREKCSAHERLKREYVALEREVNSARSAIVARDQAANDAGYTFVEAGEGGQGDRVPALALVSHDAQKLLDDAGEGTLDVRLQKLASSKLSLESEVRKLKLQLNEERAARQNGVANHHDEDYENELETLRRGITEAKARAARAEAEAALQAAAAARLDAQLTRLRARQDQHDDMEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837553;
- 90% Identity
- iTF_00837553;
- 80% Identity
- -