Iave001668.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026095.1:14543509-14547991[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-10 2.1e-07 31.2 0.0 4 39 146 182 143 186 0.90 2 4 9.4e-13 6e-10 39.3 0.2 2 39 198 235 197 238 0.94 3 4 5.4e-12 3.4e-09 36.9 0.0 5 45 256 296 253 296 0.95 4 4 8.3e-17 5.2e-14 52.3 0.0 1 40 303 343 303 348 0.92
Sequence Information
- Coding Sequence
- ATGCTTGGTCACGGAGGAGCTGTCCACGTGAAATGTGAGCCTCCGTCCGATGAAGAAGACAATACGTCACAATTAGCCGATTTGTTTCTTACTAAGTCCCCCCGGCTGGAGGAGCTGGGTCCGCTGACGCCAGCAGGTCCAGCTGCGACACCGGTTTGCGTGAAGACTGAACCAGCCGCGGGAGACACATCACTTATGCTGGAAACGCTCGAGTCTACACCTCATAACATGGGATCTTTTCTGTTAGAGAGACATTTGGCGATGCTGAGTTCGGCAGAGCTAGCTGACTCTATAGACTTCATGCCATTACAAAGAGTCAAAGATGAGCCATCATCGGAAGGAGAACATCAACACCTTAGCAGCGATGAGACGAGTGACTCGTGCGGAATGTCGGAGCCGAGCGCTCGAGGCAGCCCCAAGAGTTGGTCGCAGAAAGATATGGATAATGCTCTCGACGCTTTGAAGAATCACAATATGAGTCTTACTAAGGCATCAGCCCGTTACGGCATCCCATCGACGACACTTTGGCAACGTGCCCACCGGCTCGGCATTGACACACCCAAGAAGGAAGGAACTTCCAAGTCTTGGAGCGACGAAGACCTTCGAGCCGCTCTGCAGGCGCTGAGAGCTGGTGCACTTTCTGCTAATAAGGCTAGCAAAGCCTATGGTATACCAAGCAGTACCCTGTACAAGATAGCGCGCCGTGAAGGTATCAGACTGGCGGCGCCGTTCAACGCGGCGCCGGTAGCGTGGCGCCGATGTGACTTGCCACGTGCTCTCGCCGCTATCCGCGCCGGTGCCGCCGTTCAGCGAGCTGCCATACATTATAACATTCCTACAGGAACTCTATACGGTCGGTGTAAGAGAGAAGGCATAGAACTCTCTCGTTCAAACCCGACGCCTTGGTCAGAAGACGCCATGGGCGAAGCTTTAGAAGCAGTCAGAATCGGTCAAATGTCAATAAACCAAGCAGCAATACATTACAACTTGCCATATTCATCTCTCTACGGAAGGTTCAAGAGATGCAAGTTTCAGAACCAGCAAATACCTCAAGAGCAGCATCAAACCCCAGACAACCCTAGTCAGTCGGAACCTCCGTACACACAGGAAACGACGACGCCTCCGTACCACGAAACGACACCTACGAACGACTACCAGTACCACGACATTCAAGACTACTCCATGTACTACCAAGGGTTTACGACCAACCAAGGGTTTAATGGAATAACAACCAGCTGA
- Protein Sequence
- MLGHGGAVHVKCEPPSDEEDNTSQLADLFLTKSPRLEELGPLTPAGPAATPVCVKTEPAAGDTSLMLETLESTPHNMGSFLLERHLAMLSSAELADSIDFMPLQRVKDEPSSEGEHQHLSSDETSDSCGMSEPSARGSPKSWSQKDMDNALDALKNHNMSLTKASARYGIPSTTLWQRAHRLGIDTPKKEGTSKSWSDEDLRAALQALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRCDLPRALAAIRAGAAVQRAAIHYNIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQNQQIPQEQHQTPDNPSQSEPPYTQETTTPPYHETTPTNDYQYHDIQDYSMYYQGFTTNQGFNGITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837395; iTF_00836449;
- 90% Identity
- iTF_00837395;
- 80% Identity
- -