Idim015027.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442334.1:14001793-14008345[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-10 1.2e-07 32.0 0.0 4 39 149 184 146 189 0.88 2 4 5.4e-12 2.4e-09 37.5 0.2 2 39 201 238 200 241 0.92 3 4 1.9e-11 8.4e-09 35.7 0.1 2 45 256 299 255 299 0.95 4 4 3.9e-18 1.7e-15 57.1 0.0 1 44 306 350 306 351 0.95
Sequence Information
- Coding Sequence
- ATGCTTGGGCACGGTGGTGTCGTTCATGTGAAATGCGAGCCGGTGTCCGATGAAGAAGACAATCCACCGCAACTAGCtgatttatttcttactaagCAATCCTCGCGACTCGAGGAGCTGGCTCCACTGACGCCGGCCGCACCGTCTGCGACGCCGGTGTGCGTGAAGACAGAACCTGGCACGGGAGACACCTCGCTCATGATCGAAACACTTGAGTCTACACCTCATATCACGGGCTCATTTCTCTTAGAAAGACATCTGGCTATGCTGAATTCGACAGGGCTTGCAGATTCTACAGAGTTTTTGCCTTTACAAACAGTTAAAGATGAGCCGTTACCAGAAGGAGAAGCGCAGGCTTTGAGCAGCGACGAAGCGAGTGATTCGTGTAGCGTCTCGGAGGCGTATGCAAGCGCTCGCGGCAGTCCTAAGGGCTGGTCGCAGGCCGACATGGAAGGAGCGCTCGACGCTTTGAAGAATCACAATATGAGTCTCACTAAAGCGTCATCCCGTTACGGCATCCCATCGACAACACTGTGGCAGCGCGCGCGCCGGCTTGGCATCGACACGCCCAAGAAGGAGGGCGCGCCCAAGAGTTGGAGCGACGCAGACTTGCGCGCCGCGCTGCAAGCACTGCGACATGGATCGCTCTCCGCTAACAAGGCGAGCAAGGCTTATGGCATCCCGAGTAGCACGCTGTACAAGATAGCTCGCCGCGAAGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCGGTTGCGTGGAGGCGCGCCGACCTGCCGCGCGCACTCGCCGCTATCCGCGCCGGCGCGGCCGTGCAGCGCGCCGCACTACACTACAACATTCCTACAGGAACCCTTTACGGTCGGTGTAAAAGAGAAGGCATAGAACTATCTCGCTCTAATCCGACGCCCTGGTCCGAGGATGCCATGGGAGAAGCACTAGAAGCAGTAAGGGTCGGCCAAATGTCTATAAACCAAGCGGCGATACATTACAACTTGCCCTACTCGTCACTTTATGGGAGGTTTAAGAGATGCAAATATCAGAACCAGCAAATTCCTCAAGAACAGCATCTTCCCCCGGATAACTCCAGTCAGGCAGAACCTTCGTACCACGACACGACTCCTCCTTACCACGAAACGACACCCCCGTACCATGAAACTACACCCCCTTATCACGAGACTACACCCCCTTACCACGACTCTACACCTCCGTACCAGTACCACGATATTCAAGACTATACGTTGTACTACCAGGGGTTACCGACCAACTCAGGATTTAATGGAATCACAACCAGCTGA
- Protein Sequence
- MLGHGGVVHVKCEPVSDEEDNPPQLADLFLTKQSSRLEELAPLTPAAPSATPVCVKTEPGTGDTSLMIETLESTPHITGSFLLERHLAMLNSTGLADSTEFLPLQTVKDEPLPEGEAQALSSDEASDSCSVSEAYASARGSPKGWSQADMEGALDALKNHNMSLTKASSRYGIPSTTLWQRARRLGIDTPKKEGAPKSWSDADLRAALQALRHGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRADLPRALAAIRAGAAVQRAALHYNIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQNQQIPQEQHLPPDNSSQAEPSYHDTTPPYHETTPPYHETTPPYHETTPPYHDSTPPYQYHDIQDYTLYYQGLPTNSGFNGITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00834547;
- 90% Identity
- -
- 80% Identity
- -