Istr012569.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577858.1:586154-589781[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-09 2.9e-07 30.7 0.0 4 39 177 213 174 217 0.89 2 4 2.3e-12 6.7e-10 39.2 0.2 2 39 229 266 228 269 0.94 3 4 1.3e-11 3.8e-09 36.7 0.0 5 45 287 327 284 327 0.95 4 4 2e-16 5.9e-14 52.1 0.0 1 40 334 374 334 379 0.92
Sequence Information
- Coding Sequence
- ATGCTTGGTCACGGAGGAGCTGTCCATGTGAAATGCGAGCCTCCGTCCGATGAAGAAGACAATACGTCGCAACTAGCCGATTTGTTTCTTACTAAGCTCTCTCCTGGATTTTGTTCCGCCAATGATACGAAATCGGAATCTAATCATATCAATGAAGGGCATCATACTCCATTACTGCAACAGTTGCAATCCCCCCGGCTGGAGGAGCTGGGCCCGCTGACGCCAGCAGGTCCAGCTGCGACACCAGTATGCGTAAAGACTGAACCAGCTGCGGGAGACACATCACTTATGCTAGAAACGCTCGAGTCTACACCTCATATCACGGGATCATTTCTGTTAGAGAGACATTTGGCGATGCTGAGTTCGGCAGAGCGAGCTGACTCTACAGACTTCATGCCATTACAAAAAGTCAAAGATGAGCCATCATCGGAAGGAGAACATCAACATCTTAGCAGCGATGAGATGAGTGACTCGTGCGGTATGTCGGAGCCGAGTGCTCGAGGCAGCCCCAAGAGTTGGTCGCAGAAAGATATGGATAGTGCTCTCGACGCTTTGAAGAATCACAATATGAGTCTTACTAAGGCGTCAGCCCGTTACGGCATCCCATCGACGACACTTTGGCAACGTGCCCACCGGCTCGGCATTGACACACCCAAGAAGGAAGGAACCTCCAAGTCTTGGAGCGACGAAGACCTTCGAGCCGCTCTTCAGGCGCTGAGAGCTGGTGCACTTTCTGCTAATAAGGCTAGCAAAGCCTATGGTATCCCAAGCAGTACCCTGTACAAGATCGCGCGCCGCGAAGGCATCAGACTGGCAGCGCCGTTCAACGCGGCGCCGGTGGCGTGGCGCCGATGTGACTTGCCACGTGCTCTCGCCGCTATCCGCGCCGGTGCCGCCGTTCAGCGTGCTGCCATACATTATAACATTCCTACAGGAACCCTATACGGTCGGTGTAAGAGAGAAGGCATAGAACTCTCTCGTTCAAACCCGACGCCTTGGTCAGAAGACGCCATGGGCGAAGCTTTAGAAGCAGTCAGAATCGGTCAAATGTCAATAAACCAAGCAGCAATACATTACAACTTGCCATATTCATCTCTCTACGGAAGGTTCAAGAGATGCAAGTTTCAGAACCAGCAAATACCTCAAGAGCAGCATCAAACCCCAGACAACCCCAGTCAGTCGGAACCTCCGTACACACACGACACGACAACGCCTCCGTACCACGAAACAACACCTACGAACGACTACCAGTACCACGACATTCAAGACTACTCCATGTACTACCAAGGGTTTACGACCAACCAAGGGTTTAATGGAATAACAACCAGCTGA
- Protein Sequence
- MLGHGGAVHVKCEPPSDEEDNTSQLADLFLTKLSPGFCSANDTKSESNHINEGHHTPLLQQLQSPRLEELGPLTPAGPAATPVCVKTEPAAGDTSLMLETLESTPHITGSFLLERHLAMLSSAERADSTDFMPLQKVKDEPSSEGEHQHLSSDEMSDSCGMSEPSARGSPKSWSQKDMDSALDALKNHNMSLTKASARYGIPSTTLWQRAHRLGIDTPKKEGTSKSWSDEDLRAALQALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRCDLPRALAAIRAGAAVQRAAIHYNIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQNQQIPQEQHQTPDNPSQSEPPYTHDTTTPPYHETTPTNDYQYHDIQDYSMYYQGFTTNQGFNGITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00834547;
- 90% Identity
- iTF_00834547;
- 80% Identity
- -