Hgut001249.1
Basic Information
- Insect
- Hypselothyrea guttata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035045125.1
- Location
- JAWNNJ010000216.1:612195-617029[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-115 7.5e-111 370.2 20.6 1 299 30 321 30 322 0.98 2 2 0.045 8.2e+02 -0.9 3.7 210 241 341 371 323 395 0.52
Sequence Information
- Coding Sequence
- ATGGACTCCACAAGCGCTACGGGAAGGAGGCGGAACAACATGTGCGTCAATGCCGAGGATAACGCTCTTGATCAGATCACCAAGGAGGCAGAAGCACGGCTAGCAGCACGTCGCCAAGCCCGTGCTGAAGCACGTGAAATACGCATGCGTGAGCTGGAGAAGCAACAACTTGAGCAGGAGCAATGCGCAGACCGTGCGTTCGACATGCAGAACACGGTTGGCGGTGTCAACAACGACACGATTCTAACACATCCCGCCCGACTTGTCTACGGCGGCATCATTGGCGTCTCGAGGTCAACGGTGTCGCGACGAAGCAGCGAGGATTCATTGGAGGAGGAAGGTCGCAGTTTTCGCGACATTAAACATGATCTTAAAGAAGTGGAAGAACGATTTCGTAAAGCAATGATAACAAACGCCCAGCTGGACAACGATCGATCATCGCAAACGTATGAAGTCAAGTTGCTGAAGGACAAAAGCGAAACGATGCAAGAGTCGTTTATGCAGTTGCAGCGGgagttgaaaaacaaattgcgcGATTGCAACGCGTTGAAGCGTAATTTAGATCGCACAACGCTCGAATTGGGCCTAGTGCAAGGCCAACTGATCGAGCGGGACGCGTTAATAGCTGAGCATGGGCTGGTTATTGTGGCCATTGAGAATGCTGATGGCACCGATGCCAAGCGTGCGTTAGTCAGAGTCGAGAATGCCAATATCTTGTCGTCGGTGCAAGGATCGCTAGATGTAAGACTCAAAAGATTCGCCGAGGAGAAGCAGCAACTTGCGGCTGAACTGCAAAAGTTGCACGAACAGTTAGACGTCTATAAAAGTGAGGGCAAGGGCGGTTTAGGTAGCTCATTAAGTGGTACTTCGGCCAATGACGACGATTACGATGTGCAGCGGGAAGCGAATAAAATCATATCAGACTACAAATACAAACTGCAGAAGGCCGAACAGGAAATTGGCAGTCTTCAAGCGAGTTTAGCACGTTCCGAGACACAAGTAGTACGGTATAAGAGTACGGCGGAAGCGGCCGAGAAGGCAGAGGCTGAACTTAAAGTTGAACGGCGTAAGCTGCAGCGTGAGCATCGAGAAGTTTTGGAGCGCCTGGAGGAAGCAGAGACAGCAAATAATCACTTGTTAAAAAGACTTGATAAACTCAAAAATGCAAAGAGCGCCATCTTAAAGGATTTATGA
- Protein Sequence
- MDSTSATGRRRNNMCVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELEKQQLEQEQCADRAFDMQNTVGGVNNDTILTHPARLVYGGIIGVSRSTVSRRSSEDSLEEEGRSFRDIKHDLKEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSETMQESFMQLQRELKNKLRDCNALKRNLDRTTLELGLVQGQLIERDALIAEHGLVIVAIENADGTDAKRALVRVENANILSSVQGSLDVRLKRFAEEKQQLAAELQKLHEQLDVYKSEGKGGLGSSLSGTSANDDDYDVQREANKIISDYKYKLQKAEQEIGSLQASLARSETQVVRYKSTAEAAEKAEAELKVERRKLQREHREVLERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00901491;
- 80% Identity
- -