Basic Information

Gene Symbol
ZFY
Assembly
GCA_951799385.1
Location
OX637326.1:1651040-1668726[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.071 6.6 8.4 1.1 1 23 98 120 98 120 0.97
2 12 0.065 6 8.5 3.7 1 23 127 149 127 149 0.97
3 12 0.78 73 5.1 1.1 1 15 153 167 153 176 0.82
4 12 5.2e-06 0.00048 21.4 3.6 1 23 181 203 181 204 0.95
5 12 0.0017 0.16 13.4 0.9 2 23 211 232 210 232 0.97
6 12 1.2e-05 0.0011 20.3 0.7 2 23 246 267 245 267 0.97
7 12 1.7 1.6e+02 4.0 5.0 3 23 273 294 271 294 0.95
8 12 0.00017 0.016 16.6 4.7 2 23 305 327 304 327 0.97
9 12 0.11 10 7.8 0.8 1 23 334 357 334 357 0.93
10 12 0.0037 0.34 12.4 0.4 5 23 369 388 367 388 0.93
11 12 0.00014 0.013 16.9 4.6 1 23 397 419 397 419 0.98
12 12 0.00072 0.067 14.6 0.4 1 23 424 447 424 447 0.97

Sequence Information

Coding Sequence
ATGCTGCAGTGCGAAGAAGAAACCAAAGACTTGAAATCAAAATTGCCGTTAAAGAAGAGATTAGAGAAGCGAGCCAAGCCAGAAGATGACGACTTCCCAAAGAAAGAAAAGCCGGATGAAAAGAATGTCTCTGAAGAAAATGAAAAGCAAGCAGATGATACTCAAGCTAAAACGGAAACCCCCTTGATGTACTCTTACGAAACATTAAGGAACATAGAAATTGTGACCATCGATGAAGAAGAACGGCAGAAGGAACACAAAGAGACGCTGAAATCGCGTCAACACATGCGTCATGTGTGTGAGCACTGCGCACTCGGCTTCGTACTCAAACAGGCGTTCGATATGCATATGAAGGTTCATTCTCCTCAATCAGGCGACCACGAGTGCTTAATCTGTCACTCCCGTCTCAAAACCGCTGATATGTTATACCGGCACCGCTTACGGCATTACCGCCGTTACCGGTGCCTGCTTTGCCGGATGCGGTTCAAGGATAAAGATACTGCCGCCTGCCATGTCATGAACGATCACGCTGGACAGACCTTCGAGTGCGATCATTGTGGGAGAGGATTCAAGCGACCACAGTACCTGAAGAGGCACGTGGAACAGCATCATACCAAACCTCACCATCTGGAATGTGGAGTTTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGgaCTCATAACGAGGAGGTACGAGCCAAGACGGTGCATCTGCCGGTCACCTGCGAGATCTGTTCTCGCGACTACAAGAACAAAGCAAGCCTGAAGCGCCACCTCCTCACTCACGACGAGGATGTCCACTGCGAGATCTGTTTCGAGAAGTGCAAGAATCGCATCACGTTGGGACATCACTACTTGAAAGTGCATAATGAGAAATATGTCGGTGCGCCGGAGCAGACTTGTACGCACTGCGACCGGATCTGTGCGACGCGCGCCATGCTCAAGCGACACATGCAGAGGATGCACAGCGATAGAACTAAGAAATACCAGTGCGACCACTGCCAGCGCCTGTACCTGACCAAGGGCGAGGTGCGCGCGCACATCACGTGGTCGCACATGCCGGCCGAGGCACGCGGTGGGCACGCGTGCACGTGCGGCCGCATCTTCCGCAGCCCCTCGCTGCTGCGCGACCACAAGGCCAGGTTCCACGCCGCGCAGCCGCCGCCCAGGGTCCACCAGTGTGAACACTGTGAAAAAGCTTTTGCGAACAAACAAGTGCTGAATCGCCACAAGAAAAGCCATTCCAACGAGATGTATCCCTGCAAGGAATGTGGGTTACTGTTCAAAACTCAACCTTACGTCAAAGTCCACTACCAAATCAAACATCTCAACATGACGAGAGCTCAAATCAAGGCACAGAGGAAGCGCAACAAGGAACAGCTGATACAGAATAATATACATAGGAGTACGAATTGGGAGCCATCCATCTCGGACAAGAAGAAGAGTTCCGTTGCAATTGAAGCCGAAGAAGACCCGCTTTTGGTGCAGGAGGGCGACGTAACGATCAAATTGGAGAAGGAAGATGAAGACCTTCAAATCCCGACGTTCCAAACATTTGTGGACATTAGTAGGGAATGA
Protein Sequence
MLQCEEETKDLKSKLPLKKRLEKRAKPEDDDFPKKEKPDEKNVSEENEKQADDTQAKTETPLMYSYETLRNIEIVTIDEEERQKEHKETLKSRQHMRHVCEHCALGFVLKQAFDMHMKVHSPQSGDHECLICHSRLKTADMLYRHRLRHYRRYRCLLCRMRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVHLPVTCEICSRDYKNKASLKRHLLTHDEDVHCEICFEKCKNRITLGHHYLKVHNEKYVGAPEQTCTHCDRICATRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHAAQPPPRVHQCEHCEKAFANKQVLNRHKKSHSNEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKRNKEQLIQNNIHRSTNWEPSISDKKKSSVAIEAEEDPLLVQEGDVTIKLEKEDEDLQIPTFQTFVDISRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01441398;
90% Identity
iTF_00449573;
80% Identity
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