Hrec015778.1
Basic Information
- Insect
- Hyppa rectilinea
- Gene Symbol
- -
- Assembly
- GCA_951799385.1
- Location
- OX637313.1:3396310-3398052[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 9.6e-07 29.4 0.0 1 38 8 46 8 52 0.91
Sequence Information
- Coding Sequence
- ATGCCGAAGATACCCCAATACACAAAAGAGGCTCTTGACGAGGCTTTAGAAAAAATCAATACTAAAACTATGTCTTTGCGAGCAGTCGcgaaaaaatacaatatacctAGAGCTACTTTacaatttaaactaaaaaatcCTACTACAAAATCTCAATTTGGGCCAACACCATATTTAACATTAGAAGAAGAAAATGCTATCACAGAATGGTTGATTAAAATGGCCCGTAAAGGCTTTCCTAGAAAGTCAGATGATGTTCTCGACACAGTTCAAAAATGTTTGACTGACAATCCACGCGTTACTCCTTTTGTCAAAAATCGTCCTGGTCAGGGATGGCTAAAAGCTTTCTTAAAACGTCATCCTAGTTTAGTCAAGAGAACTAGCGAGGGAGTAACTAAAGCCAGTGCTTGCGTGTCTGAAGCGGACATAAAAAAATGGTTTCTTGAAATAAGAGACTACTTTACGAGTGAAAATCTGTTAGAGGCAATTCAAGATCCAAAACGTGTTTTCAACGCTGACGAGACGGGATTTCAGCTCTGTCCGTCTACTGGTCGCGTACTTGCTGCTAAAGGAGACAGAAATGTTTATTCTGTGGAGCTAGGGAACTCGAAGGAAAATGTAAcagtattatttacattttctgcTGACGGCAAGACTTGTCCTCCATTAATTGTTTTTCCCTATAAACGACTCCCTGAAAAAATCGCTTCCTCAGTGCCACCTAAATGGGGTATAGGACGAAGCGATACGGGATGGATGACGGCGGATGTTTTTAACCAGTTCATTACCGAAATATTTGCTCCATACCTCActgaaaacaacataaaaaaaccgGTTATCCTATTTATAGATGGTCACAAAAGCCATATCACTTTACAGCTTAGTTTGACTTGTAAAGAGCTAGGAGTTGAACTAATTGCTCTCTACCCCAACACAACCCGCATTACTCAGCCAGCAGATGTTTCCGTCTTTGGgcctattaaaaaaatgtaccgAAATACAGTTCGGAAATTTCAATCAGAAAACATTGGAGAGGTAGTAACAAAGTTAAACATCGCTATTATTCTAAAAACTGTTGTTGATAATTTAAAGCCTGGAACTATAATAAATGGATTTCGAGCATGTGGTTTGTGTCCTTTTGATGAGAATGCAATAGATTACTCCAAATGTCTAGGTTCACTAAAAAATGTAGAAGAGTGCAATGATAAAAACAAGCTCATGTCCCTAAAAGAATTTGAAAACATTGTAGGAGTCGAAATGATAGACAAGTTGAAAGCACTTAGATCTCAAGGTGTCATGACGAATGTTTCATCCCCAACATTATTTAAACTCTGGTCCTTTTTTCAAAGTGACCCACAGAAGGAATCAACGGATATTGAAATACAATATGATTACAATACAGCAACAAACGTAAATTTTACTAGCGAAAATAATGTGACTACACTTAAAATTACCATGACACCTACAAAAAATCCTATAAATTTGTGCCACCCTTCGACTTCTGCTATTGTAACAGAAACTACGCATCTCAACAAGTcaattaatgattatttaaataaagtccCAGAAAACAAGAGAAAATTTGTACGAACGACGGAAAAAAATCCGTTTGCCATTACCTCCGAGAAATATAGATCAGCTATTGAAAGAAAAGAACTAGAAAAgcaagaaaaagaaaatcaaaaatggaaagaaaaagaaaaagagagGAGAAGGCAGCGGAACGGAAAGAAAACGCTCTAA
- Protein Sequence
- MPKIPQYTKEALDEALEKINTKTMSLRAVAKKYNIPRATLQFKLKNPTTKSQFGPTPYLTLEEENAITEWLIKMARKGFPRKSDDVLDTVQKCLTDNPRVTPFVKNRPGQGWLKAFLKRHPSLVKRTSEGVTKASACVSEADIKKWFLEIRDYFTSENLLEAIQDPKRVFNADETGFQLCPSTGRVLAAKGDRNVYSVELGNSKENVTVLFTFSADGKTCPPLIVFPYKRLPEKIASSVPPKWGIGRSDTGWMTADVFNQFITEIFAPYLTENNIKKPVILFIDGHKSHITLQLSLTCKELGVELIALYPNTTRITQPADVSVFGPIKKMYRNTVRKFQSENIGEVVTKLNIAIILKTVVDNLKPGTIINGFRACGLCPFDENAIDYSKCLGSLKNVEECNDKNKLMSLKEFENIVGVEMIDKLKALRSQGVMTNVSSPTLFKLWSFFQSDPQKESTDIEIQYDYNTATNVNFTSENNVTTLKITMTPTKNPINLCHPSTSAIVTETTHLNKSINDYLNKVPENKRKFVRTTEKNPFAITSEKYRSAIERKELEKQEKENQKWKEKEKERRRQRNGKKTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029192; iTF_00888191; iTF_00822887; iTF_00889128; iTF_00276266; iTF_00261796; iTF_00787594; iTF_01503789; iTF_00822892; iTF_00822893; iTF_01367789; iTF_01367790; iTF_01367791; iTF_01367792; iTF_01367793; iTF_01367794; iTF_01367795; iTF_01367796; iTF_01367798; iTF_00822896; iTF_00822886; iTF_00822888; iTF_00822920; iTF_00822894; iTF_00822895; iTF_00822897; iTF_00822898; iTF_00822917; iTF_00822899; iTF_01359666; iTF_01359668; iTF_01359669; iTF_01359664; iTF_01359667; iTF_01332506; iTF_01029194; iTF_01029195;
- 90% Identity
- iTF_01029194; iTF_01029195; iTF_01029192; iTF_00888191;
- 80% Identity
- -