Sbip015788.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- -
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000731.1:2134196-2136349[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-08 1.1e-05 26.3 0.0 3 38 10 46 9 52 0.92
Sequence Information
- Coding Sequence
- ATGCCAAAGATACCCAACTACGTCAAAGAGGCCCTAGATGAGGCTTTAGAAAAATTAAATTCAAAAGCAATGTCTTTGAGAGCAGTCGCCAAAAAATATAATATACCCAGAGCAACTTTACAGTTTAAACTCAAAAATCCTACTACAAAATCTGAATTTGGGCCAACACCGTATCTAACAAATGAGGAAGAAAATAATATCGCAGAGTGGTTGATTAACATATTGTCTCGTAAAGGGTTTCCTAGGAAATCCGATGACGTTTTAGACACAGTTCAAAAGTTTTTGACTGAAAATCCACGCGTTACTCCTTTTCTTAACAACAGGCCTGGTCAGGGATGGCTCAAAGCTTTTTTAAAACGGCACCCTAGTTTAGTATCAAGAACCAGCGAGGGGGTTACTAAAGCCAGTGCCTGCGTGTCTGAAACCGACATTAAAAAATGGTTTCTCGAAATAAAAAACTACTTCACTGACGAAAACCTGTCAGACGTAATTCAGGAACCAAAACGTGTCTTTAATGCTGACGAGACAGGTTTTCAACTCTGTCCTTCTACTGGTCGCGTGCTTGCTGCTAAAGGAGACAAAAATATATATGCTGTGGAACAAGGAAACTCAAAAGAAAATGTTACAGTGCTTTTTGCATTTTCTGCCGATGGGAAGACTTGTCCTCCTTTAATAGTCTTTCCGTACAAACGCCTACCTGATAAAATTGCGACATCGGTGCCACCTAAATGGGGTATTGGACGCAGTGATTCAGGGTGGATGACGGCAGATGTTTTTAACCAGTTCATTACTGAGTTGTTTGACCCATATCTTGCTGAAAATAACATCACAAAACCTGTTATCTTGTTTATTGATGGCCATAAAAGTCATATCACTTTACAGCTTAGTTTGACTTGTAAAGAGCTAGGAATTGAATTGGTAGCTCTTTACCCCAACACCACTCGAATCACTCAGCCAGCAGATGTTTCCGTATTTGGACCAATAAAAAAAATGTACCGAAAAGCAGTACGAAAATTTCAGTCAGAAAACTTTGGCGAGGTGGTAACAAAGCTCAACATTGCTATTATTTTAAAAACCGTTGTTGACCAATTAAAACCTGAAACAATAATAAATGGTTTTCGGGCATGTGGCTTGTGTCCCTTTGATGAGAATGCAATAGATTACTCCAAATGTTTAGGGGCAACTAAAAGTGTTGAAGAGGCAGACAGCCAAAGAGCAGACAATGACGAAAACAAGGTCATGTCCCTAAAAAAGTTTGAAGATATTGTAGGGGTTGAAATGATAGACAAGATGAAAGCACTGAAATCTCAAGGTTTCACGCAGAATGATTCCTCACCTACATTATTCAAACTTTGGAGTTTTTTTCAAAGTGATCCTCTACAGAAAGAATCAACTAATATTGAAATACAATCTAATAATAACATAACAAACGTAAATCTCATCAGTGAAAATGTTGTGACATCAGTTAAAATTACTATGACACCTACCAAAACTCCTATGGATTTGTGCCAACCTTCTTCTTCTACCTCTGCTGTAACCACAATGACAGAAACTACTCAACTTAATAAGTCAATTAGTGACTACTTACAGAATGCCCCAGAAAATAAAAGGAAGTCTATTCGAAAGACAGAAAAGACTCCATTTGTGATAACTTCCGAAAATTTTAGATCAGCTATTGAAAAAAAAGAGATGGAAAAGCAAGAAATACAGAAACAAAAAATGGAAAAGAAAAGAATAAGAGAGGAGAAGAAAGAAAATGCTCTGAAGACTAAAAAAGGCAAAGGCGTTGGAAAGAAGTCAAAAAATATTAATCAAGGAAAAGACATTATTGACATAAAGTCTGAAACGGAAAATGCTAAAGAGGAAAACATTGGTGACGTTAAAAACGACGGTAAAGTAAAGATTCTATCAAGTATAGAGCTAGTTTCTTGTGACGTGTGCCGGCGTCTGGCTATTAAAAATAAGTCACTACTATGTAGTTCATGCAAAAAGCACTACCATCGCCAATGCATTCCTCGAAAACACCTCGAGCACATGCCAGATGACGATGAGCTGTCGGGATTTATATGCCACAACTGTTTCTTACTGAATGACGACTCTGGTGATGAATCTGAATCTTATAAAGAGGAAGATCATGATGAAGAAATGATTTAG
- Protein Sequence
- MPKIPNYVKEALDEALEKLNSKAMSLRAVAKKYNIPRATLQFKLKNPTTKSEFGPTPYLTNEEENNIAEWLINILSRKGFPRKSDDVLDTVQKFLTENPRVTPFLNNRPGQGWLKAFLKRHPSLVSRTSEGVTKASACVSETDIKKWFLEIKNYFTDENLSDVIQEPKRVFNADETGFQLCPSTGRVLAAKGDKNIYAVEQGNSKENVTVLFAFSADGKTCPPLIVFPYKRLPDKIATSVPPKWGIGRSDSGWMTADVFNQFITELFDPYLAENNITKPVILFIDGHKSHITLQLSLTCKELGIELVALYPNTTRITQPADVSVFGPIKKMYRKAVRKFQSENFGEVVTKLNIAIILKTVVDQLKPETIINGFRACGLCPFDENAIDYSKCLGATKSVEEADSQRADNDENKVMSLKKFEDIVGVEMIDKMKALKSQGFTQNDSSPTLFKLWSFFQSDPLQKESTNIEIQSNNNITNVNLISENVVTSVKITMTPTKTPMDLCQPSSSTSAVTTMTETTQLNKSISDYLQNAPENKRKSIRKTEKTPFVITSENFRSAIEKKEMEKQEIQKQKMEKKRIREEKKENALKTKKGKGVGKKSKNINQGKDIIDIKSETENAKEENIGDVKNDGKVKILSSIELVSCDVCRRLAIKNKSLLCSSCKKHYHRQCIPRKHLEHMPDDDELSGFICHNCFLLNDDSGDESESYKEEDHDEEMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00831124;
- 90% Identity
- iTF_01367789; iTF_01367790; iTF_01367791; iTF_01367792; iTF_01367793; iTF_01367794; iTF_01367795; iTF_01367796;
- 80% Identity
- -