Ccec030032.1
Basic Information
- Insect
- Calycopis cecrops
- Gene Symbol
- -
- Assembly
- GCA_001625245.1
- Location
- LUGF01051968.1:1002-3143[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-09 4.4e-06 27.4 0.0 1 38 8 46 8 51 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGATACCCCAATATACAAAAGAGGCCCTTGAGGAGGCTCTAGAAAAAGTGAACACAAAAACCTTGTCATTGAGAGCagtagcaaaaaaatataatatacctagagGTACTTTACAGTTCAAACTTAAAAATCCTACTTCGAAATCCCAATTCGGACCGACACCGTATTTGACATTTGAAGAAGAAAATACGATCGCAGAGTGGTTGATAAAAATGGCCCGTAAAGGCTTTCCTAGAAAGTCAGATGATGTTCTCGACACTGTTCAAAAATTTCTAACTGATAATCCACGCGATACCCCTTTTGTCAATAATCGGCCTGGTCCGGGATGGctaaaagcttttttaaaacGTCACCCTAGTTTAGTTAAAAGAACCAGCGAGGGAGTAACTAAAGCCAGTGCCTGCGTGTCTGAAGCGGACATAAAGAAATGGTTTCTTGAAATAAGAAACTACTTGACAAGTGAAAACTTGTTAGAGGCAATTCAGGACCCAAAGCGTGTGTTTAATGCTGACGAGACAGGATTTCAGCTGTGTCCCTCTACTGGTCGCGTACTAGCTGCTAAAGGagacaaaaatgtttattctgtGGAACTAGGAAACTCCAAAGAAAATGTTACGGTACTATTTACCTTTTCCGCTGACGGCAAAACTTGTCCTCcattaattgtatttccttACAAACGACTGCCTGAAAAAATTGCGACATCAGTGCCACCTAAATGGGGTATAGGACGCAGTGATTCAGGGTGGATGACGGCAGATGTTTTCAACCAGTTTATCACTGAAATATTTGATCCATATCTTACTGAAAGCAACATCCAAAGACCAGTCATTCTATTTATAGATGGTCACAAAAGCCATATCACTTTGCAGCTTAGTTTGACTTGCAAAGAGTTAGGAATTGAACTAGTTGCTCTTTACCCCAATACTACCCGCATCACTCAGCCAGCAGATGTTTCCGTttttgggcctattaaaaaaagataccgAAACGCAGTTCGAAAATTTCAATCAGAAAACATTGGAGAAGTggtaacaaaattaaacatcGCTACTATTCTTAAAACTGTTGTAGATTACTTGAAACCTGAAACTATTGCAAATGGCTTTCGAGCATGTGGCTTATGTCCCTTTGATGAGAATGCTTTAGATTACTCCAAATGTTTAAGTCAATCAAAGAATATAGAAGAGGACAGTTATGACAACAAGCTCATGTCCCTAAAAGAATTTGAAAACATTGTAGGAGCCGAAATGATAGACAAgctaaaagtattaaaatctCAAGGTGTTAGCAcgaatgaaacgtctccttcaTTGTTTAAACTTTGGTCCTTTTTTCAATGTGATCGCCCGCAAAAGGAATCAACGGATATTGAAATACACTATGATAATAATACAGCAACAAATGTAAatctaaataatgaaaataatgtgaCCACGCTTAAAATTACTATGACACCGACAAAAAATCCTTCAGATTTGTGCCAGCCTTCGATGTCAGAAACTGTACCAACTATTACAAAAACTACTCATCTTATTAAGTCAATAACTGAGTACTTGCCCAATGCTCCAGAAAATAAGAGAAAGTTTATTCGAAAGACGGAAAAAACCTCCTTTGTCATTACTTCCGAGAATTTCAGATCAGCTATTGAAAGAAAAGAATTAGAAAAACAAGAAAAAGAGAATCAGAAACtggagagaaaaagaaaaagagaagaGAAGGCAGCTACACTGGAAAAAAATGCTGAGAAGACGAATAAAGCTAAAGGTGTtggaaaaaaatctaaaaaagttACCAAAAACGATGAAATTAATATTGAGACCGAAAATGAAAACTCTGGAAAGGAAAactgtattaaaaatgaaattaaaaaagaaaacagtaaACCAAagataatatcaaatatagaaGTAGTAAATTGTTATATGTGCAAGCGTTTAGCTGCTAAAAATAAGTGCCTATTGTGTGATTCTTGTAAAAAGTACTATCATCGTCATTGCATTCCTAATAAACACGAAGAGCATTTGCCAGATGATGATGAGCTTTCTGATTTTGTATGCCATAAATGTTTTCTGTTAAATGATAATGACTCTGAATCTTTTGAGGATGAAGATAATGAAGAAGAAATGTTCTAA
- Protein Sequence
- MPKIPQYTKEALEEALEKVNTKTLSLRAVAKKYNIPRGTLQFKLKNPTSKSQFGPTPYLTFEEENTIAEWLIKMARKGFPRKSDDVLDTVQKFLTDNPRDTPFVNNRPGPGWLKAFLKRHPSLVKRTSEGVTKASACVSEADIKKWFLEIRNYLTSENLLEAIQDPKRVFNADETGFQLCPSTGRVLAAKGDKNVYSVELGNSKENVTVLFTFSADGKTCPPLIVFPYKRLPEKIATSVPPKWGIGRSDSGWMTADVFNQFITEIFDPYLTESNIQRPVILFIDGHKSHITLQLSLTCKELGIELVALYPNTTRITQPADVSVFGPIKKRYRNAVRKFQSENIGEVVTKLNIATILKTVVDYLKPETIANGFRACGLCPFDENALDYSKCLSQSKNIEEDSYDNKLMSLKEFENIVGAEMIDKLKVLKSQGVSTNETSPSLFKLWSFFQCDRPQKESTDIEIHYDNNTATNVNLNNENNVTTLKITMTPTKNPSDLCQPSMSETVPTITKTTHLIKSITEYLPNAPENKRKFIRKTEKTSFVITSENFRSAIERKELEKQEKENQKLERKRKREEKAATLEKNAEKTNKAKGVGKKSKKVTKNDEINIETENENSGKENCIKNEIKKENSKPKIISNIEVVNCYMCKRLAAKNKCLLCDSCKKYYHRHCIPNKHEEHLPDDDELSDFVCHKCFLLNDNDSESFEDEDNEEEMF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00831124;
- 90% Identity
- iTF_00822886; iTF_00822920; iTF_00822887; iTF_00822892; iTF_00822893; iTF_00822894; iTF_00822895; iTF_00822896; iTF_00822897; iTF_00822898; iTF_00822917; iTF_00822899;
- 80% Identity
- -