Basic Information

Insect: Hyppa rectilinea
Gene Symbol: F9
Assembly: GCA_951799385.1
Location: OX637323.1:7576966-7582777[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-10 7.5e-08 32.9 0.0 1 36 16 52 16 59 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-10	7.5e-08	32.9	0.0	1	36	16	52	16	59	0.89

Sequence Information

Coding Sequence: ATGCCGCGAAAGTATGTGAAAAAGGGGACGAGAACGGGACAAGTAGACGAAGATAGCATGAAATCTGCGATAGACGAAGTTTTGAATAAAACCTTATCTATCAGAAAGGCTGCGCAAAAATATGGCGTCAAACCAACTACGCTCGAAAGTCGCTTGACGAAGTTACATAAACAAGCAGCTACTGAAGATAGACATAGTAAGGTACGTGTTTTCAGTTCCAAATACTCTTCAAACCAAGTGTTTTCTGCAGAAGAAGAGGCTCATTTAAATACGTACATAATGAAATGCTCCAAAATGCACTACGGATTGACGATTGTCCAAGTAAGAAAACTTGCGTACGAGTTTGCAAAAGCTAATAGATTACGGTTTCCTTCTAATTGGGATCACAATCAAATGGCAGGAAAGGATTGGGTGGAGAGTTTTCGCAAGCGTTGCACAAATTTAAGCCTCAGAAAACCAGAAAACACCAGTGCCGCAAGGTGCTTCGCATTCAATAAGACTGCCATAAAAGATTTCTTCGAAAACCTTGAGACTGTATACGTAAAATACAAGTTCACTGCTGACCGAATTTACAATTTTGACGAGTCGGGGATATCCACAGTATTAAATACGCCCAAGGTTTTAGCTGagaaaaaccaaaaacaaatcGGTCAACTTGTTTCGGCTGAGAGAGGAGAACTTGTTACATTTGGAGGAATCATATCAGCCAGTGGCAACACAATTCCGCCTCTATTTATCTTCCCCAGGGTTCATTTTAAAGACCATTTTATGGACGGTGCTCCGGAAGGTAGTCTGGGAATGGCAACAAGGAGTGGTTGGATAAATACCACTATATTTTTGGAGGTGTTGAAACATATCCAGAAGAAAACGTTGTGCTCAAAAGATAACCCTATCTTGCTACTGGTTGATAACCATGAAAGCCATGTCACAATAGAAGCAGTAGACTATGCTCGTGACAATGGCATAGTTTACCTTTCGTTCCCACCGCATACAACTCACCGTCTTCAGCCCTTAGACGTTGGTGTATTTGGACCTTTCAAGGCAAAATTGAAAGTGGCATTTAACGATTGGCATGTGAATAACCCGGGCAAAACTCTAAACATATACAATATACCGAAGCTTGCCAAAGTAGCCTATTTTGAATCGTTCAGTGGGAGAAATATAACACGTGCCTTTGAGAAGACTGGAATCTGGCCATTTAATAAGCTAGCCTTCGGAGACGACGACTTTGCAGCTGTAAGCGTATACCAATCCGGGTCCACGTCAGCTCCAGAAGAGATCGACGAGATAGGTAATGTTGAAGATGTGGAACAACAAGATTTACCACCAGGGTTGGCCCCTACATCAGCTTCTTTTCCGCCACAGTCAGAATCCGCACAAGGTGGGCAGTCTATTTCAACAGCGAGTCAAGGTGCCAATGTATCAGAAACGGAGCTTACTCAAGAAGATCTCGTAGAGAGCTTAGTTCCTGTTTCACCTACCTTACATAGATCTACAACTCCACCGGCGACTTTACCTGCTGGAGGACTAATAACTCCAGAAGTTATCCGGCCTTACCCTATAGTAGACAGAACTGAGTCTAAAAAGTCGAGAAAAGGGAAACAGCAAGGAAAGTCGAGAATATATACAGATACTCCGGAGAAAATAAGACTGGAAGAAATAGAGAAAACAAAACAGTTGAAGAAGCAAGAGCAAGAGATaaaacaaaaggctaaggagatGAAGCGAGCTTTCAATTTAGTATCCATCAACACCAATCCAAAAAGACAGAAGAAAACTGTAAGGACAACTAAATCAAAGAGGCAAAAGAAAACTTTCAAGCCTGTCAGTGAGGACGAGTCTGATTCTGAGGATGAAACTAATATCAGTTTAAGAGAAAGTTCTTGTTCTCCCATCGAAGAAGCGTCCGAGCAATTGGATGTTCAAGATGAAACTCCAGTTATGTCTATGAACATAAACCAAGGATGTTTCGTGCTAGTcaaatttgctaaaaaaaatactgttttatattatgttgggCAAGTGCTTATAAAATACAGTCCTATTGAATACATAGTTTCATTTATGAGGAAGAAGCCTGGTTCCTGGAAATTTGTTTTTCCCACCACCAAGGATGAGGGGAGTGTCAATATAACAGATGTGGTACATATACTGACACCATCAAAATCTGCTTTGACAGCGAGAACGTCCAACATTTATAGCTTCGAGAAAGACTTATCTGTATGGAAAGCAGAAGAGCTCTTCGTCCGTCTAGGAGAGTACGACTTCAAACGCACCAACGACTCCCGTACCTACAACTTCAAGGTCGCAGAGATCCGTCAGCACGAGGCCTTTGAGCTCTCCAACTATAAGAACGACATCGCCATCTTGAAGCTGGACAGACCGGCCATCTTCAATACTTACGTGTGGCCTATCTGCCTCCCGCCTCCCAACTTGCAGCTCACTGACGAACCGGCTATTGTTATTGGTTGGGGCACGCAATGGTACGGTGGTCCTCACAGCAACGTTCTGATGGAGGTAACAGTTCCGGTGTGGGACCACGACAAGTGCGTCGCTTCGTTCACTGACAGCATCTTCAACGAGACCCTCTGTGCTGGAGGGAAGGAGGGCGGGAAGGatgcttgccagGGTGACAGCGGTGGTCCTCTGATGTACCAAATGCCGAGTGGCCGCTGGACTTCCATAGGCGTGGTATCCTGGGGCCTGCGCTGTGGAGAACCAGACCACCCTGGGCTCTACGCAAGCGTCGGCAAATACCTCGGATGGATCGCACAGAATGCCCGCTTCTAA
Protein Sequence: MPRKYVKKGTRTGQVDEDSMKSAIDEVLNKTLSIRKAAQKYGVKPTTLESRLTKLHKQAATEDRHSKVRVFSSKYSSNQVFSAEEEAHLNTYIMKCSKMHYGLTIVQVRKLAYEFAKANRLRFPSNWDHNQMAGKDWVESFRKRCTNLSLRKPENTSAARCFAFNKTAIKDFFENLETVYVKYKFTADRIYNFDESGISTVLNTPKVLAEKNQKQIGQLVSAERGELVTFGGIISASGNTIPPLFIFPRVHFKDHFMDGAPEGSLGMATRSGWINTTIFLEVLKHIQKKTLCSKDNPILLLVDNHESHVTIEAVDYARDNGIVYLSFPPHTTHRLQPLDVGVFGPFKAKLKVAFNDWHVNNPGKTLNIYNIPKLAKVAYFESFSGRNITRAFEKTGIWPFNKLAFGDDDFAAVSVYQSGSTSAPEEIDEIGNVEDVEQQDLPPGLAPTSASFPPQSESAQGGQSISTASQGANVSETELTQEDLVESLVPVSPTLHRSTTPPATLPAGGLITPEVIRPYPIVDRTESKKSRKGKQQGKSRIYTDTPEKIRLEEIEKTKQLKKQEQEIKQKAKEMKRAFNLVSINTNPKRQKKTVRTTKSKRQKKTFKPVSEDESDSEDETNISLRESSCSPIEEASEQLDVQDETPVMSMNINQGCFVLVKFAKKNTVLYYVGQVLIKYSPIEYIVSFMRKKPGSWKFVFPTTKDEGSVNITDVVHILTPSKSALTARTSNIYSFEKDLSVWKAEELFVRLGEYDFKRTNDSRTYNFKVAEIRQHEAFELSNYKNDIAILKLDRPAIFNTYVWPICLPPPNLQLTDEPAIVIGWGTQWYGGPHSNVLMEVTVPVWDHDKCVASFTDSIFNETLCAGGKEGGKDACQGDSGGPLMYQMPSGRWTSIGVVSWGLRCGEPDHPGLYASVGKYLGWIAQNARF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00751982;
90% Identity: iTF_00831112; iTF_01093960; iTF_00831113; iTF_01527019; iTF_00302029; iTF_00751981; iTF_00751982; iTF_00302033; iTF_00408338; iTF_01094834; iTF_00408344; iTF_01133657; iTF_01133658; iTF_01133659; iTF_00037724; iTF_01133660; iTF_01133661; iTF_01533855;
80% Identity: -