Gpyl025127.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000029.1:4405976-4410516[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-11 3.7e-08 33.9 0.0 1 40 140 180 140 184 0.91
Sequence Information
- Coding Sequence
- ATGGCGTTGACGAACGCAGAAAAACAGCGTCGCTACAGACTAAAGTTAAAACTAGACCCTGAAAAAAATGCTGaagccaaaaaaaaacatcttgaaAGGTACCacgcaaataaaaaacttgtGAAAGACATGACAGAGCGTGAACATAGAAGTGCAAAGCGTAAATGGAAGAATGCGAATAAGAAACGACGAGAACGTCAAAAGACTGCTCAACAAATTATGAACGTTACACCGCCGTCCAGCCCACGATCAGGAACTCCAGTTTCACCGAAGTCTAGAGGTCGAAGACAAATTCGAAGAGATCGATCTGCAGTgtacagaaaaaatatgaaattgcaAGAAGAACTGGAAAAGATGAAAAAGAGaatCAAAAAGCCGCGAAAGTATGTAAAAAAGGGGACGAGAACGGGACAAGTAGACGAAGATAGCATGAAATCTGCGATAGAcgaagttttgaataaaactttATCTATCAGAAAGGCTGCTCAAAAATATGGCGTCAAACCGACTACGCTCGAAAGTCGCTTGATAAAGTTACATAAACAAGCAGCTACTGAAGACAGACATAGTAAGGTACGTGTTTTCAGTTCCAAATACTCTTCAAACCAAGTGTTTTCTGCAGAAGAAGAGGCTCACTTAAATACGTACATAATGAAATGCTCCAAAATGCACTACGGGTTGACGATTGTCCAAGTAAGAAAACTTGCGTACGAGTTTGCAAAAGCTAATAGATTACGTTGTCCTTCTAATTGGGATCACAATCAAATGGCAGGAAAGGATTGGGTGGAGAGTTTTCGCAAGCGTTGCACAAATTTAAGCCTCAGAAAACCAGAAAACACCAGTGCCGCAAGGTGCTTCGCATTCAATAAGACTGCCATAAAAGATTTCTTCGAAAACCTTGAGACTGTATACGTAAAATACAAGTTCACTGCTGATCGAATTTACAATTTTGACGAGTCGGGGATATCTACAGTATTAAATACGCCCAAGGTTTTAGCTgagaaaaaccaaaaacaaatcGGTCAACTTGTTTCGGCTGAGAGAGGAGAACTTGTTACGTTTGGAGGAATCATATCAGCCAGTGGCAACACAATTCCGCCTCTATTTATCTTCCCCAGGGTTCATTTTATAGACCATTTTATGGACGGTGCTCCGGAAGGTAGTCTGGGAATGGCAACAAGGAGTGGTTGGATAAATACTACTATATTTTTGGAGGTGTTGAAACATATCCAGAAGAAAACGTTGTGCTCAAAAGATAACCCTATCTTGCTACTGGTTGATAACCACGAAAGCCACGTCACAATAGAAGCAGTAGACTATGCTCGTACCAATGGCATAGTTTACCTTTCGTTCCCACCGCATACAACTCACCGTCACCAGCCCTTAGACGTTGGTGTATTTGGACCTTTCAAGGCAAAATTGAAAGTGGCATTTAACGATTGGCATGTGAATAATCCGGGCAAAACTCTAAACATATACAATATACCGAAGCTTGCCAAAGTAGCCTATTTTGAATCGTTTAGTGGGAGAAATATAACACGTGCCTTTGAGAAGACTGGAATCTGGCCATTTAATAAACTAGCCTTCGGAGACGACGACTTTGCAGCTGTAAGCGTATACCAATCCGGGTCCACGTCAGCTCCAGAAGAGATCGACGAGATAGGTAATGTTAAAGATATGGAACAACAAGATTTACCACCAGGGTTGGCCTCTACATCAGCTTCTTTTCCGCCACAGTCAGAACTTGCACAAGGTGAGCAGTCTATTTCAACAGCGAGTCAAGGTGCCAATGTATCGGAAACGGAGCTTACTCAAGAAGATCTCCTAGAGAGCTTAGTTCCTGTTTCACCTTCCTTATATAAATCTACAACTCCACCGGCGATTTTACCTGCCGGAGGACTAATAACTCCAGAAGTTATCCGGCCTTACCCTATAGTAGACAGAACTGAGCCTAAAAAGTCGAGAACAGGGAAACGGCAAGGAAAATCGAGAATATATACAGATACTCCGGAGAAAATAAGATTAGAAGAAATAGAGAAATCAAAACAGTTGAAGAAGCAAGAACAAGAGATAAAACAAAAGGCTAAGGAGATTAAACGAGCGTTAAATTTAGTATCAGCCAACACCAATCAAAAAAGACAGAAGAAAACTGAAAGGACAACTAAATCAAACAGGCAAAAGAAGACTTTCAAGCCTGTCAGTGAGGACGAGTCTGATTCTGATGATGAAACTAATATCAGTTTAAGAGAAAGTTCTTGTTCTCCGATCGAAGAAGCGTCTGAGCAATTGGATGTTCAAGATGAAACTCCAGTTATGTCTATGAACATTAACCAAGGAAGCTTCGTGCTAGTCaaatttgctaaaaaaaatactgttttatattatgttgggCAAGTGCTTATAAAGTACAGCCCTATTGAATACATAGTTTCATTTTTGAGGAAGAAGCCTGGTTCCTGGAAATTTGTTTTTCCCACCACCAAAGATGAGGGAAGTGTCAATATAACAGATGTGGTACATATACTGACACCATCAAAATCTGCTTTAACAGCGAGAACGTCCCACATTTATAGCTTCGAGAAAGACTTATCTATGTATGCTGTCGGATAA
- Protein Sequence
- MALTNAEKQRRYRLKLKLDPEKNAEAKKKHLERYHANKKLVKDMTEREHRSAKRKWKNANKKRRERQKTAQQIMNVTPPSSPRSGTPVSPKSRGRRQIRRDRSAVYRKNMKLQEELEKMKKRIKKPRKYVKKGTRTGQVDEDSMKSAIDEVLNKTLSIRKAAQKYGVKPTTLESRLIKLHKQAATEDRHSKVRVFSSKYSSNQVFSAEEEAHLNTYIMKCSKMHYGLTIVQVRKLAYEFAKANRLRCPSNWDHNQMAGKDWVESFRKRCTNLSLRKPENTSAARCFAFNKTAIKDFFENLETVYVKYKFTADRIYNFDESGISTVLNTPKVLAEKNQKQIGQLVSAERGELVTFGGIISASGNTIPPLFIFPRVHFIDHFMDGAPEGSLGMATRSGWINTTIFLEVLKHIQKKTLCSKDNPILLLVDNHESHVTIEAVDYARTNGIVYLSFPPHTTHRHQPLDVGVFGPFKAKLKVAFNDWHVNNPGKTLNIYNIPKLAKVAYFESFSGRNITRAFEKTGIWPFNKLAFGDDDFAAVSVYQSGSTSAPEEIDEIGNVKDMEQQDLPPGLASTSASFPPQSELAQGEQSISTASQGANVSETELTQEDLLESLVPVSPSLYKSTTPPAILPAGGLITPEVIRPYPIVDRTEPKKSRTGKRQGKSRIYTDTPEKIRLEEIEKSKQLKKQEQEIKQKAKEIKRALNLVSANTNQKRQKKTERTTKSNRQKKTFKPVSEDESDSDDETNISLRESSCSPIEEASEQLDVQDETPVMSMNINQGSFVLVKFAKKNTVLYYVGQVLIKYSPIEYIVSFLRKKPGSWKFVFPTTKDEGSVNITDVVHILTPSKSALTARTSHIYSFEKDLSMYAVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00831112; iTF_01093960; iTF_00831113; iTF_00448970; iTF_00831115; iTF_01527019; iTF_00302029; iTF_00751981; iTF_00302033; iTF_00408338; iTF_01094834; iTF_00408344; iTF_01133657; iTF_01133658; iTF_01133659; iTF_00037724; iTF_01133660; iTF_01133661; iTF_01533855; iTF_00300105; iTF_00124181; iTF_01377400; iTF_00000250; iTF_01533857;
- 90% Identity
- iTF_00831115;
- 80% Identity
- -