Basic Information

Insect: Hyphantria cunea
Gene Symbol: -
Assembly: GCA_003709505.1
Location: PKRV01000150.1:249852-263027[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.00026 0.016 15.7 2.9 1 23 203 225 203 225 0.98

2 31 0.00067 0.042 14.4 0.3 2 19 258 275 257 278 0.94

3 31 1.3e-05 0.00081 19.8 0.1 2 23 313 335 312 335 0.96

4 31 5 3.1e+02 2.2 0.5 2 19 352 369 351 370 0.82

5 31 0.0086 0.54 10.9 0.8 1 23 382 405 382 405 0.97

6 31 0.0056 0.35 11.5 1.4 1 23 423 445 423 445 0.95

7 31 5.5e-05 0.0034 17.8 2.9 2 23 480 501 479 502 0.95

8 31 0.0028 0.17 12.4 6.3 2 23 541 563 541 563 0.97

9 31 0.0028 0.17 12.4 0.3 1 23 613 636 613 636 0.97

10 31 0.00043 0.027 15.0 0.1 1 23 690 712 690 712 0.97

11 31 0.0066 0.41 11.2 6.2 1 23 723 745 723 745 0.98

12 31 0.022 1.3 9.6 1.2 2 23 757 778 756 778 0.96

13 31 0.0024 0.15 12.6 1.4 1 23 788 810 788 810 0.98

14 31 0.049 3.1 8.5 5.8 1 23 839 861 839 861 0.93

15 31 0.00057 0.036 14.6 4.0 1 23 872 894 872 894 0.98

16 31 7.2e-05 0.0045 17.4 0.8 1 23 902 924 902 924 0.98

17 31 0.00043 0.027 15.0 0.6 2 23 944 966 943 966 0.97

18 31 0.81 50 4.7 0.2 1 23 984 1006 984 1006 0.90

19 31 0.09 5.6 7.7 3.7 1 23 1013 1035 1013 1035 0.97

20 31 0.0055 0.34 11.5 1.3 2 23 1046 1068 1045 1068 0.94

21 31 0.014 0.88 10.2 0.2 2 23 1091 1112 1090 1112 0.95

22 31 6.3 3.9e+02 1.9 5.6 2 23 1155 1177 1154 1177 0.95

23 31 0.0082 0.51 11.0 0.2 2 23 1193 1214 1192 1214 0.95

24 31 0.011 0.69 10.5 0.8 2 23 1253 1275 1252 1275 0.95

25 31 0.012 0.74 10.4 1.6 2 23 1292 1310 1292 1310 0.96

26 31 0.54 34 5.2 1.9 2 21 1314 1333 1314 1334 0.93

27 31 3 1.9e+02 2.9 2.7 2 23 1357 1378 1357 1378 0.93

28 31 1.4 87 3.9 0.6 2 23 1385 1406 1384 1406 0.93

29 31 0.00016 0.0098 16.4 0.7 2 23 1417 1439 1416 1439 0.96

30 31 5 3.1e+02 2.2 0.4 3 23 1456 1473 1455 1473 0.76

31 31 1.9 1.2e+02 3.5 4.6 2 20 1477 1495 1476 1497 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.00026	0.016	15.7	2.9	1	23	203	225	203	225	0.98
2	31	0.00067	0.042	14.4	0.3	2	19	258	275	257	278	0.94
3	31	1.3e-05	0.00081	19.8	0.1	2	23	313	335	312	335	0.96
4	31	5	3.1e+02	2.2	0.5	2	19	352	369	351	370	0.82
5	31	0.0086	0.54	10.9	0.8	1	23	382	405	382	405	0.97
6	31	0.0056	0.35	11.5	1.4	1	23	423	445	423	445	0.95
7	31	5.5e-05	0.0034	17.8	2.9	2	23	480	501	479	502	0.95
8	31	0.0028	0.17	12.4	6.3	2	23	541	563	541	563	0.97
9	31	0.0028	0.17	12.4	0.3	1	23	613	636	613	636	0.97
10	31	0.00043	0.027	15.0	0.1	1	23	690	712	690	712	0.97
11	31	0.0066	0.41	11.2	6.2	1	23	723	745	723	745	0.98
12	31	0.022	1.3	9.6	1.2	2	23	757	778	756	778	0.96
13	31	0.0024	0.15	12.6	1.4	1	23	788	810	788	810	0.98
14	31	0.049	3.1	8.5	5.8	1	23	839	861	839	861	0.93
15	31	0.00057	0.036	14.6	4.0	1	23	872	894	872	894	0.98
16	31	7.2e-05	0.0045	17.4	0.8	1	23	902	924	902	924	0.98
17	31	0.00043	0.027	15.0	0.6	2	23	944	966	943	966	0.97
18	31	0.81	50	4.7	0.2	1	23	984	1006	984	1006	0.90
19	31	0.09	5.6	7.7	3.7	1	23	1013	1035	1013	1035	0.97
20	31	0.0055	0.34	11.5	1.3	2	23	1046	1068	1045	1068	0.94
21	31	0.014	0.88	10.2	0.2	2	23	1091	1112	1090	1112	0.95
22	31	6.3	3.9e+02	1.9	5.6	2	23	1155	1177	1154	1177	0.95
23	31	0.0082	0.51	11.0	0.2	2	23	1193	1214	1192	1214	0.95
24	31	0.011	0.69	10.5	0.8	2	23	1253	1275	1252	1275	0.95
25	31	0.012	0.74	10.4	1.6	2	23	1292	1310	1292	1310	0.96
26	31	0.54	34	5.2	1.9	2	21	1314	1333	1314	1334	0.93
27	31	3	1.9e+02	2.9	2.7	2	23	1357	1378	1357	1378	0.93
28	31	1.4	87	3.9	0.6	2	23	1385	1406	1384	1406	0.93
29	31	0.00016	0.0098	16.4	0.7	2	23	1417	1439	1416	1439	0.96
30	31	5	3.1e+02	2.2	0.4	3	23	1456	1473	1455	1473	0.76
31	31	1.9	1.2e+02	3.5	4.6	2	20	1477	1495	1476	1497	0.92

Sequence Information

Coding Sequence: ATGGCTCTCAAACTTGGAAAATGCAGGCTCTGCCTCAAACTTGGGGACTTTTATTCCATCTTTACGGTGGACAATTCATTACAGCTTGCAGAGATGGCAATGGAATGCGCTCGAATCAAAATATACGATGGAGATGGACTTCCAGACAAAGTTTGTTCAGAATGCATACAGAAGTTAAGTAGTGCTTATATATTCAAACAACAATGTGAGCGAGCAGACCAGGAGTTGCGGCGGAACTATGTTCCACCACCAGGATTCAGTATCAGTCCACCGCCACCTAACAGGCAGAGTAGTGACTCTGCCTTCTCAAATCACACTGACAGCTCCAATATTACCAAACCGTCGTCTTCCTTCGAAGAAAAAATATCTACCGCAACCAGAACGCGGAAACGTAGTGTGGAGAGCGATGGAAACGTCTCAATGGGTGGTCAATCCAGCGATTTCAGACCAACCAGCTTAAAGCGGATCGAGGAACTTAGAAATTCTCAAAAAAAGAGGCCTCGTTTACAATCTGAAAACACTTCACAGCCAGACTCTGATTATGAGGACAATAGTGGTTCATACTTACCTGAAACTGACTCAGATGAACCACTTATAAAGAACACATTCAAGTGCAAGTTCTGTCCGAAACAGTTCACAACTTTCAGAAGTTTGGCTAACCACAGTAGAATTCATACTAAAAGCCATAATAGTAAGACAAATGACGTAGATACCGTTGTAAACGAACCAAAGAAAAGCATCGAGGATGCTGCAGATGTCGAGGATAAACTAAGCTGTGATAAGTGTGGAAAAACCTTCAAACTGAAGATAATGCTAAAACGTCACTCTGACGTGTGCTTGAAAACACCTGTTAAATCTCCGCAGAAGGAACTGCTCATATCCCTAGCACCTATAGACGCGAAACCAATTGCACCACAATCGACTGTAACAATGATACCGTGTGAATATTGCGTTGCTACGTTTAGAACTCAGGAAAATTTAGCAAAACATATGAAAATGGTACATGCGGCTGTCCTGAAGAGAGAAGCTGAAGCAAACAGAAAGGTGCCAGTTCCTTGCTTGTATTGCGACTTAATGTTCAATGATTACCACCAACATAATGCGCACTTTGTCGAATGTCCAAAGTTGGATGAGTCTAAGCCATATGTGTGCCCTGTATGTGACAAATGGACGTCTAGGAGAACTTCATACTACCAACATCTTAGGAACATGCACTTTGAACCTCGCGTTTCTTACGTGGAGCCGGAAATTGAAATGCACGAATACCACGAGTGTCGTATGTGTTCGAAGAAGTTAGTGTCTAAGGAACAACTGATCAAGCATTTATCTGCTCATGTGTCGAATATCCAGGATGATGGCACACTTGACAATGACAGAGAGGATGTCGATTCTTTAAAATCAGTACAAAGCAACACGTATCCAGCTGGAGGTCCATTGAAATGTGATGTTTGTGATAAAGAATTTAAGTACAAAAAGGCTTTGTTAACGCATCAACAAAGACATCACACAGATGCCCCAGTCGAAGTAAAAGTCGAACCGCCTGATAAAGCTTCCACAAGTCTTTTGAGCGAAAAGCAATATCGCTCAGATTCAGAATCTAgtcaagaagaagaagacaacaCGTGCGATATTTGCGAGAAACATTTCTCCTACAAACGTCTCTTGCTCCACCACAAGAGGACCAAGCATAACATGAGCTCAGGCCACAAACGCGCCAAGATCTACCTCAAGGACTGCTCAGTCCGCTGTCTTATCTGCGACCTGCAAATGAAAGTCGGCGACATAAATGAGCACAATCAAACTCACATTGCCAAGAATATGAAACCTAGAAATCTGTATACGTGTGCGGAATGCGAAGCTACCTTTAAAGCATGCAGTGCACTCGCAACTCATATAAAGCTAGTACATAGATTAAAACAGCAAGCGGAAATCAATACGGTAAATCCGTCGGATTTTTGTGAAGTCGTTGTGACAAAGTCGGAACCGCTGGACTGGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGATTGAGCAGGACGGCAAGCCACTGGTAGACCTGAGTGGCTTTACGTGTCCCATCTGTGGGAAGAAGATGCCAACACTAATATCACTGAAAAGACACGTGAATTGGCACACTAACGTTGGCAAGAACTTAGAAAAGAAATACGAGTGCTTTGTCTGCAAAGAGGCTTTTAGATTCCAATGTCACTACAAGCTACACATGCGCGAGCATTACACCGATACAACTCTGGATCCGAGACACCTTACGTGCACCATCTGCGGACGCAAGAGCAAACACCTACGCGCCGCTCAAGCGCACATGACCTACCACAAACAAACCCGCTTCAAGAACAAAGACTACCAATGCTCCATTTGCGAGAGAGTTTTTCAGCATAGAAAAGTGTACCTCTCTCACATGGCCGTACACTACAAGAGAGGAGAAAGTGTTCAAAACACTATCGTCGGTACAGTCTTACCTAATAATGTCGACAAGAACACTTTCGATGGGACCCACACCTGCATACACTGTGGTAAAGTCTGCGATTCTGAAAGTTCTCTAAAACATCATCTCATTTGGCACACATCTAAGACTTTCTTATACGGGGCTCGGCACGAGTGCACGAtttgtaaaatcaaatttaccaataaaagaCGACTCGAACTCCACACGAGAACACACTATGAAGATGATAATGGGCCCTACAAGTGCAAAATATGTGGTAAAGGATACACTGAGGAAGGCTACTTCAAAAAACATGTCAAGGGCCACAATTTCGATCACCAATCGCATAAAAAGAGAATAGAAAACATCAGAAAGGATAAAGTAAAATGCCCTATATGCTCTCGGTATTACAAGGACCTTATCAAACTTATTCGACATCTCAGACGAACGCATCCCGAGAGTAAGATGATCAAGACCGACCCTGATGCGCCAGCACAACCTTACTTTTCGTGTAAACTATGCGCTAAAGTGTTCTTAGATGAGAGAAGACTTCAAGCGCATGAAGAAGCTCATTTAAGGAAGCCAGAGTTCTTTAAATGTAAGTTCTGTGGAAAGAAGACAATATCATTGAAGAATCACAGAGTCCACATTAAGGGTCATTTGACACAGAAGTATTTAGACAACCCTCTAAAATGTCCGCACTGTGAAGAGACGTTTGGGCGAGGCTACGACCTGCACTACCACGTGCGTGACGTCCACGGCATCGAGGAGACGTGGATCGCAGACCGCACCGAGCAGCGCCTGGCCGGGCCGCTCAAGGACCTGCAGTGCTCCATCTGTATGAAGGTCCTCGCCAGCAAAGGAAACTTCGAGCGCCACCTCGACTATCATAATTCTTTAAGATGCAACTACTGTTTTGATTACTTCAGCTCCCTCAGGTTCTTAGAGGGTCATCTCACTTTTTCATGTGATAAAAAGAAGCTTTTAGGCGACACGGAAATTTatccaaagaaaataaaatgtcacgTATGTTACAAACCCTTCCACGTTCAGGTCAAACTAGACTGTCACCTGCGCACACAGCACGGTATCAAAGTGAACAAGGAAGCTTCGTCGGGCAAAAAAGAAATCGTGTGTGATTATTGCTTTAAAGTGTTCGAGAATGATTATGCTCTGTCTACACACAAAATTTATCATCGCACTGTTGGGTACTATGGTTGCATTTATTGCAAGCGAAAGTTTAACACAATGACTGTATATCGGAAACATAAGAATCATCATTTCTCGCAGCTAAATGTAGATGAACCGACCAAGTGTGAACATTGTGACGAAACTTTCGTAGCGTTCAGAGACATGATTTATCACATGAGGGATGTCCATGGTGATGATAAAGACTGGGTGACGTTGCCCAAGGAATCAATAGAGGAAACGTGCAAAATCTGTAATAAAGCATTTTACAATTTGCAAAGACATCTGATGTATCACGAGGAAAACAGGTGCAAAAAATGCGGCGAATATTTCTTCTCTACGGCTGATTTCGATAACCATCTGTGCTCCATAGAAAGCGACGACGACGAGAATGTTAACGGTGTGGATAGCACCATCGAAAAACTTAAGTACGAGGAGTGCAGCTTCTGCTTTAAACCTACCACCAGAAAAAGCTCTAAAGCGATGCACGAACACATCCACAAGGGCTCGGGTTCTATATCGTGTAGGTTCTGTGTACTCAAATTCAAGACTATGGACGCGTTTAACATCCACGCCTTTTCACACCGAAGcagaaaatataacaagaaaCCCATAAAGTGCAAAAAATGTGgtgaaaaatttgttaaatatggGCTTTTTATAAAGCACATGAAGCTCGTGCATAAGTCGTTGAAAAAGATGCATTATAGAGCCATAGTGAAGCCGGAGCCGTGCGTAGTGTGCGGTGAAGATTTCCCTAACCTGCACAATCACTACCGCGCGCACTTGCTCAACCAGTGCCAGTCTTGTCACAAATACTTCACATCCTCCAAACTATTCTCTATGCACGAATGTAACAAAGAAGACTCTGATCCTTCTAAAGTGTTTATTTGTGATGTCAGGTTGAACGAACTGATAAACTCGTACGTCCCTAAGGATTTGAAGGACGATGAAAAATACTATGGCAACACTGACGACGAAGAAGAGGAAGATGATGCGGTTTTTCAGGTGTGCGGTGAAGATGAAGAGAGTCAAGACAGCAAGGACATTGATGTCAAAGACATTGatattgatgaaaataatataactagtCAACCATTGTCTATCCAATCACCAATTATATCTGATGTGTTGTCACTCTACCAGAAGGAAATGAATCCCGAAGTTGTGGACGATAATATTGTGAACTTAACCGATGATGATTCTGATGTGGACCAAGTAGCCCAGAATCATACAGACACTATAgttattgatgatgacgatTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNITKPSSSFEEKISTATRTRKRSVESDGNVSMGGQSSDFRPTSLKRIEELRNSQKKRPRLQSENTSQPDSDYEDNSGSYLPETDSDEPLIKNTFKCKFCPKQFTTFRSLANHSRIHTKSHNSKTNDVDTVVNEPKKSIEDAADVEDKLSCDKCGKTFKLKIMLKRHSDVCLKTPVKSPQKELLISLAPIDAKPIAPQSTVTMIPCEYCVATFRTQENLAKHMKMVHAAVLKREAEANRKVPVPCLYCDLMFNDYHQHNAHFVECPKLDESKPYVCPVCDKWTSRRTSYYQHLRNMHFEPRVSYVEPEIEMHEYHECRMCSKKLVSKEQLIKHLSAHVSNIQDDGTLDNDREDVDSLKSVQSNTYPAGGPLKCDVCDKEFKYKKALLTHQQRHHTDAPVEVKVEPPDKASTSLLSEKQYRSDSESSQEEEDNTCDICEKHFSYKRLLLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKNMKPRNLYTCAECEATFKACSALATHIKLVHRLKQQAEINTVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKEAFRFQCHYKLHMREHYTDTTLDPRHLTCTICGRKSKHLRAAQAHMTYHKQTRFKNKDYQCSICERVFQHRKVYLSHMAVHYKRGESVQNTIVGTVLPNNVDKNTFDGTHTCIHCGKVCDSESSLKHHLIWHTSKTFLYGARHECTICKIKFTNKRRLELHTRTHYEDDNGPYKCKICGKGYTEEGYFKKHVKGHNFDHQSHKKRIENIRKDKVKCPICSRYYKDLIKLIRHLRRTHPESKMIKTDPDAPAQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYLDNPLKCPHCEETFGRGYDLHYHVRDVHGIEETWIADRTEQRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLTFSCDKKKLLGDTEIYPKKIKCHVCYKPFHVQVKLDCHLRTQHGIKVNKEASSGKKEIVCDYCFKVFENDYALSTHKIYHRTVGYYGCIYCKRKFNTMTVYRKHKNHHFSQLNVDEPTKCEHCDETFVAFRDMIYHMRDVHGDDKDWVTLPKESIEETCKICNKAFYNLQRHLMYHEENRCKKCGEYFFSTADFDNHLCSIESDDDENVNGVDSTIEKLKYEECSFCFKPTTRKSSKAMHEHIHKGSGSISCRFCVLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCGEKFVKYGLFIKHMKLVHKSLKKMHYRAIVKPEPCVVCGEDFPNLHNHYRAHLLNQCQSCHKYFTSSKLFSMHECNKEDSDPSKVFICDVRLNELINSYVPKDLKDDEKYYGNTDDEEEEDDAVFQVCGEDEESQDSKDIDVKDIDIDENNITSQPLSIQSPIISDVLSLYQKEMNPEVVDDNIVNLTDDDSDVDQVAQNHTDTIVIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_01360905;
80% Identity: -