Basic Information

Insect: Hypercompe scribonia
Gene Symbol: -
Assembly: GCA_949316085.1
Location: OX438969.1:4753651-4760662[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00064 0.068 14.7 1.0 1 23 237 259 237 259 0.98

2 29 0.00061 0.065 14.7 0.2 2 19 291 308 290 311 0.93

3 29 1.8e-05 0.0019 19.6 0.2 2 23 346 368 345 368 0.96

4 29 0.01 1.1 10.9 0.8 1 23 415 438 415 438 0.97

5 29 0.0034 0.36 12.4 0.9 1 23 456 478 456 478 0.95

6 29 0.0013 0.14 13.7 2.3 2 23 514 536 513 536 0.96

7 29 0.00062 0.067 14.7 4.5 2 23 575 597 575 597 0.97

8 29 0.0034 0.36 12.4 0.3 1 23 647 670 647 670 0.97

9 29 0.00053 0.056 14.9 0.1 1 23 724 746 724 746 0.97

10 29 0.0081 0.86 11.2 6.2 1 23 757 779 757 779 0.98

11 29 0.026 2.8 9.6 1.2 2 23 791 812 790 812 0.96

12 29 0.0031 0.33 12.5 1.4 1 23 822 844 822 844 0.98

13 29 0.0025 0.27 12.8 5.8 1 23 873 895 873 895 0.96

14 29 0.0012 0.12 13.9 2.9 1 23 906 928 906 928 0.98

15 29 1.3e-05 0.0014 20.0 0.7 1 23 936 958 936 958 0.98

16 29 0.00053 0.056 14.9 0.6 2 23 978 1000 977 1000 0.97

17 29 0.98 1e+02 4.7 0.2 1 23 1018 1040 1018 1040 0.90

18 29 0.11 12 7.7 3.7 1 23 1047 1069 1047 1069 0.97

19 29 0.0067 0.72 11.5 1.3 2 23 1080 1102 1079 1102 0.94

20 29 0.017 1.8 10.2 0.2 2 23 1125 1146 1124 1146 0.95

21 29 0.0099 1.1 10.9 0.2 2 23 1227 1248 1226 1248 0.95

22 29 0.013 1.4 10.5 0.8 2 23 1287 1309 1286 1309 0.95

23 29 0.011 1.2 10.8 2.4 2 23 1326 1344 1326 1344 0.96

24 29 0.66 71 5.2 1.9 2 21 1348 1367 1348 1368 0.93

25 29 3.7 3.9e+02 2.8 2.7 2 23 1391 1412 1391 1412 0.93

26 29 1.7 1.8e+02 3.9 0.6 2 23 1419 1440 1418 1440 0.93

27 29 0.0007 0.075 14.6 0.7 2 23 1451 1473 1450 1473 0.96

28 29 6.1 6.5e+02 2.2 0.4 3 23 1490 1507 1489 1507 0.76

29 29 2 2.2e+02 3.7 4.2 2 19 1511 1528 1510 1531 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00064	0.068	14.7	1.0	1	23	237	259	237	259	0.98
2	29	0.00061	0.065	14.7	0.2	2	19	291	308	290	311	0.93
3	29	1.8e-05	0.0019	19.6	0.2	2	23	346	368	345	368	0.96
4	29	0.01	1.1	10.9	0.8	1	23	415	438	415	438	0.97
5	29	0.0034	0.36	12.4	0.9	1	23	456	478	456	478	0.95
6	29	0.0013	0.14	13.7	2.3	2	23	514	536	513	536	0.96
7	29	0.00062	0.067	14.7	4.5	2	23	575	597	575	597	0.97
8	29	0.0034	0.36	12.4	0.3	1	23	647	670	647	670	0.97
9	29	0.00053	0.056	14.9	0.1	1	23	724	746	724	746	0.97
10	29	0.0081	0.86	11.2	6.2	1	23	757	779	757	779	0.98
11	29	0.026	2.8	9.6	1.2	2	23	791	812	790	812	0.96
12	29	0.0031	0.33	12.5	1.4	1	23	822	844	822	844	0.98
13	29	0.0025	0.27	12.8	5.8	1	23	873	895	873	895	0.96
14	29	0.0012	0.12	13.9	2.9	1	23	906	928	906	928	0.98
15	29	1.3e-05	0.0014	20.0	0.7	1	23	936	958	936	958	0.98
16	29	0.00053	0.056	14.9	0.6	2	23	978	1000	977	1000	0.97
17	29	0.98	1e+02	4.7	0.2	1	23	1018	1040	1018	1040	0.90
18	29	0.11	12	7.7	3.7	1	23	1047	1069	1047	1069	0.97
19	29	0.0067	0.72	11.5	1.3	2	23	1080	1102	1079	1102	0.94
20	29	0.017	1.8	10.2	0.2	2	23	1125	1146	1124	1146	0.95
21	29	0.0099	1.1	10.9	0.2	2	23	1227	1248	1226	1248	0.95
22	29	0.013	1.4	10.5	0.8	2	23	1287	1309	1286	1309	0.95
23	29	0.011	1.2	10.8	2.4	2	23	1326	1344	1326	1344	0.96
24	29	0.66	71	5.2	1.9	2	21	1348	1367	1348	1368	0.93
25	29	3.7	3.9e+02	2.8	2.7	2	23	1391	1412	1391	1412	0.93
26	29	1.7	1.8e+02	3.9	0.6	2	23	1419	1440	1418	1440	0.93
27	29	0.0007	0.075	14.6	0.7	2	23	1451	1473	1450	1473	0.96
28	29	6.1	6.5e+02	2.2	0.4	3	23	1490	1507	1489	1507	0.76
29	29	2	2.2e+02	3.7	4.2	2	19	1511	1528	1510	1531	0.92

Sequence Information

Coding Sequence: ATGGCCTCACTCACACATCCCGCACGCGCGCCGAACCTCAGCTGGAAGGCAGAACTCGCTTCTTATCACATTCACACGCAGATATTGCAACCTCAGTATCCGCCCAAGCAACATTGTTGTACTCAACCAATCACCATTCACACATCCCGCATGCGCGCCGAACCTCAGCTGGAAGGCAAAAGTCGCTTCTTATCACATTCACACACAGATATTGCAACCGCAATATACGATGGAGATGGACTTCCAGATAAAGTATGTTCAGAATGCATACAGAAGTTAAGTAGTGCTTATATATTCAAACAACAATGTGAGCGAGCAGACCAGGAGTTGCGAAGGAACTATGTGCCACCGCCAGGATTCAGTATAAGTCCACCGCCACCCAACAGACAGAGTAGTGACTCTGCTTTCTCTAATCACACTGACAGCTCTAATCTTACTAAACCCTCGTCTTCCTTTGAAGAAAAGATATCTCCTGCGACCAGACCGCGGAAACGTAGTGTGGAGAGCGATGGAAACGTCTCAATGGGTGGTCAATCCAGCGATTTCAGACCAACCAGCTCAAAGCGGATCGAAGAACTTAGAAATTGTCAAAAAAAGAGGCCCCGCTTGCAATCTGAAAATACTTCACAACCAGACTCTGATTATGAAGACAATAGCGGATCATACTTACCAGAAACTGATTCAGATGAACCACTTATAAAGAACATATTCAAGTGCAAGGTGTGTCCGAAACAGTTCACAGCTTACAGAAGTCTGGCTAACCACAATAGAATTCACAATAAAAGCAATAATAAGTCACTTGACGTAAATACCGTTATAGACGAACCAAAGAACAGTATCGAGGATGCTACAGACGTCGAAGATAAACTGAGCTGTGATAAGTGTGGAAAAACCTTCAAACTGAAGATAATGCTAAAACGTCATGCTGATGTGTGCTTGAAAACACTTGTTAAATCACCGCAGAAGGAACTGCTCGTATCCCTAGCGCCTATAGACGCCAAAGCAAATGTAGCGCAACCAGTTGAAACTACAATATCGTGTGAATATTGCGTCGCTACGTTTAAAACTCGGGATAACTTAGCGAAACATATGAAAGTGGTTCATGCGGCTGTTCTGAAAAGAGAAGTTGAAGCAAACAGGAAAGTGCCAGTTCCGTGCTTGTATTGCAACATAATGTTCGATAACTATCACCAACATATTGCGCACTTTGTTGAATGTCCAAAGTTAGATAATTCGAAGCCGTACGTGTGCCCTGTCTGTGACAAATGGACATCTAGGAGGACGTCATACTACCAGCATCTTAGGAACATGCACTTTGAACCTCGCACTTCGTACGTGGAGTCGGACATTGAAATGCAGGAATACCACGAGTGTCGTGTGTGTTCAAAGAAGTTAGCGTCTAAGGAACAGCTGATTAGGCACTTGTCCGCTCATGTGTCCAGTATCCAGGATGATGGCACACTTGACAATGACTCCAGGGATGATGCTGATTCTATCCAATCAGTACAAAGCAACACCTATCCAGCTGGGGGCCCGTTGAAGTGTGACGTTTGtgataaagaatttaaatacaaaaaagctTTTTTAAcgcataaacaaaaatatcacaCAGATGTCCCAGTTGAAGTAAAAGTCGAAGCGCCCGATAAAGCTTCCACAAGTCTTTTGAGTGAGAAACAATATCGCTCAGAATCAGAATCTAGTCAAGAAGAAGAAGACAACACGTGCGATATTTGCGAGAAACGTTTCTCCTACAAACGTCTCTTGCTCCACCATAAGAGGACAAAGCACAACATGAGCTCAGGCCACAAACGCGCCAGAATCTATCTCAAAGACTGCTCCGTGCGCTGTCTCATCTGCGATCTGCAAATGAAAGTCGGCGACATAAATGAGCATAATCAAACGCACATTGCAAAGAATATCAAGCCAAGAAATCTGTACACGTGCGCGGAATGCGAAGCCACATTTAAAGCGTGCAGTGCACTCGCAACTCACATAAAATTAGTACATAGATTAAAACAGAAAGTGGAAATCAGTACGGTAAACCCGTCGGATTTTTGTGAGGTCGTTGTGACAAAATCGGAACCGCTGGATTGGATCCAGAGTCACAACGACTTTGGGGAGGTTCCGATCGAACAGGACGGCAAGCCGCTGGTAGACCTGAGCGGCTTTACGTGTCCCATCTGCGGGAAGAAGATGCCCACACTGATATCATTGAAGAGACACGTCAATTGGCATACTAACGTTGGCAAGAACTTAGAAAAGAAATACGAGTGCTTTGTCTGCAAAGAGGCTTTTAGATTCCAATGTCACTACAAGCTACACATGCGCGAGCACTACACGGATACGTCTCTGGATCCGAGACACCTTACTTGCACCATCTGCGGACGCAAGAGTAAACACCTACGCGCCGCTCAAGCGCATATGACCTATCACAAACAAACCCGCTTCAAGAACAAAGACTACCAATGCTCCATTTGCGAAAGAGTATTTCAGCACAGAAAAGTATACCTCTCCCACATGGCCATACACTACAAGAGAGGAGAAAGCGTTCAAAACACTATTGTAGGTACCGTTTTACCTAACAATGTCGACAAGAACACGTTCGACGGGACGCACACCTGCGTGCACTGCGGTAAGGTCTGCGATTCTGAGAGTTCTCTAAAACATCATCTCATTTGGCACACATCAAAAACTTTCTTATACGGCGCCCGGCACGAATGCGCAATTTGCAAAATCAAGTTTACTAATAAAAGACGACTCGAACTCCACACGAGAACGCATTACGAAGACGATAATGGCCCCTACAAGTGCAACATTTGTGGTAAAGGTTACACAGACGAGGGCTACTTCAAAAAACATGTCAAGGGCCATAATTTCGATCACCAATCGCATAAAAAGAGGATAGAGAACATCAGAAAGGACAAAGTGAAGTGTCCGATATGCTCGCGGTATTACAAGGACCTAATCAAACTCATCCGACATCTTAGACGGACGCATCCCGAGAGTAAGATGATCAAGTCCGACCCGGATGCACCCGCACAACCTTACTTTTCATGCAAATTATGCGCTAAAGTGTTTTTAGATGAAAGAAGGCTGCAAGCGCATGAAGAAGCTCATTTAAGGAAGCCAGAGTTCTTTAAGTGTAAGTTCTGTGGAAAGAAGACAATATCATTGAAGAATCACAGAGTCCATATTAAGGGTCATTTGACACAGAAATACTTAGACAACCCTCTGAAATGTCCGCACTGTGAAGAGACGTTCGGACGAGGTTACGACCTGCATTACCACGTGCGCGACGTCCACGGTATCGAGGAGACGTGGATCGCGGACCGCACCGAGCAGCGCCTGGCCGGACCACTCAAAGACCTGCAGTGCTCTATCTGTATGAAGGTCCTCGCCAGCAAAGGAAACTTTGAGCGCCACCTCGACTATCATAATTCTTTAAGATGCAACTACTGTTTTGATTACTTCAGCTCCCTCAGGTTCTTAGAGGGGCATCTCACGTTTGCATGTgataaaaagaaacttttagGCGACACCGAGATTTatcccaaaaaaataaaatgtcacaaaTGTTACAAACCTTTCCACGTTCAGGTCAAACTAGATTGCCACTTGCGCACGCAACACGGTATTAAAGTATGCAGAGAAGCTTCGTCGggcaaaaaagaaattgtttgtGATTATTGCTTTAAAGTATTTGAGAATGATTATGCTCTGTCTACACACAAAATTTATCATCGTACTGTTGGATACTTTGGGTGCATCTATTGCAAGCGAAAGTTTAGCACTATGACTGTATTTCGAAAACATAAGAATCACCATTTCTCGCAGCTGAATGTAGACGACCCGACTAAATGCGAACATTGTGATGAGACGTTCGTAGCGTTCAGAGACATGATTTATCACATGAGGGACGTCCATGGCGACGATAAAGACTGGGTGACGATGCCTAAGGAATCGATAGAGGAAACGtgcaaaatttgtaataaaacattcTATAATTTGCAAAGACATCTGATGTATCACGAGGAGAATAGATGTAAAAAGTGCGGcgaatatttcttttctacGGCTGACTTCGATAATCATCTGTGCTCTATAGAAAGCGATGATGACGAGAGCGCTAACGGCGTGGACAGCACTTTCGAAAAACCTAAGTATGAGGAGTGCAGTTTCTGCTTTAAACCGACGACGAGAAAAAGCTCTAAAGCGATGCACGAACACATCCACAAGGGCTCCGGTTCTATATCGTGTAGGTTCTGTGTACTCAAGTTCAAAACTATGGACGCGTTCAACATCCACGCCTTCTCACACCGAAGCAGAAAGTATAACAAGAAGCCGATAAAGTGCAGGAAATGTGGTGAGAAATTCGTTAAGTATGGGCTTTTTATAAAGCACATGAAACTCGTGCATAAGTCCTTGAAAAAGATGCATTACAGAGCCATAGTGAAGCCGGAGCCGTGCGTGGTGTGCGGTGAAGATTTCCCGAACCTGCACAACCACTATCGCGCCCACTTACTCAACCAGTGCCAGTCTTGTCACAAATACTTTACATCTTCTAAACTTTTCTCTTTGCACGAATGTGACAAAGAAGACTCAGATCCTTCTAAAGTATTCATCTGTGATGTAAATTTGAACGAACTGATAAACTCATACATCCCTAAAGATATGAGAGACGATGAGAAGTATTACGGCAACACTGACGATGAAGAAGAGGAAGAAGATACTGTTTCTCAGGTGTGTGGTGAAGATGAAGAGAGTCAAGATGGCAGGGACATTGATattgatgaaaataatataactagTCAACCGTTGTCTATCCAATCACCGATTATATCTGATGTGTTATCACTGTACCAAAAGGAAATGAATCCTGAAGTAATGGATGATAATGTTGTGAACTTAACCGATGATGATTCTGATGTGGACCATGTAGCCCAGAATCATACTCACACAATAATTatagatgatgatgaatga
Protein Sequence: MASLTHPARAPNLSWKAELASYHIHTQILQPQYPPKQHCCTQPITIHTSRMRAEPQLEGKSRFLSHSHTDIATAIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPSSSFEEKISPATRPRKRSVESDGNVSMGGQSSDFRPTSSKRIEELRNCQKKRPRLQSENTSQPDSDYEDNSGSYLPETDSDEPLIKNIFKCKVCPKQFTAYRSLANHNRIHNKSNNKSLDVNTVIDEPKNSIEDATDVEDKLSCDKCGKTFKLKIMLKRHADVCLKTLVKSPQKELLVSLAPIDAKANVAQPVETTISCEYCVATFKTRDNLAKHMKVVHAAVLKREVEANRKVPVPCLYCNIMFDNYHQHIAHFVECPKLDNSKPYVCPVCDKWTSRRTSYYQHLRNMHFEPRTSYVESDIEMQEYHECRVCSKKLASKEQLIRHLSAHVSSIQDDGTLDNDSRDDADSIQSVQSNTYPAGGPLKCDVCDKEFKYKKAFLTHKQKYHTDVPVEVKVEAPDKASTSLLSEKQYRSESESSQEEEDNTCDICEKRFSYKRLLLHHKRTKHNMSSGHKRARIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKNIKPRNLYTCAECEATFKACSALATHIKLVHRLKQKVEISTVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKEAFRFQCHYKLHMREHYTDTSLDPRHLTCTICGRKSKHLRAAQAHMTYHKQTRFKNKDYQCSICERVFQHRKVYLSHMAIHYKRGESVQNTIVGTVLPNNVDKNTFDGTHTCVHCGKVCDSESSLKHHLIWHTSKTFLYGARHECAICKIKFTNKRRLELHTRTHYEDDNGPYKCNICGKGYTDEGYFKKHVKGHNFDHQSHKKRIENIRKDKVKCPICSRYYKDLIKLIRHLRRTHPESKMIKSDPDAPAQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYLDNPLKCPHCEETFGRGYDLHYHVRDVHGIEETWIADRTEQRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLTFACDKKKLLGDTEIYPKKIKCHKCYKPFHVQVKLDCHLRTQHGIKVCREASSGKKEIVCDYCFKVFENDYALSTHKIYHRTVGYFGCIYCKRKFSTMTVFRKHKNHHFSQLNVDDPTKCEHCDETFVAFRDMIYHMRDVHGDDKDWVTMPKESIEETCKICNKTFYNLQRHLMYHEENRCKKCGEYFFSTADFDNHLCSIESDDDESANGVDSTFEKPKYEECSFCFKPTTRKSSKAMHEHIHKGSGSISCRFCVLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGLFIKHMKLVHKSLKKMHYRAIVKPEPCVVCGEDFPNLHNHYRAHLLNQCQSCHKYFTSSKLFSLHECDKEDSDPSKVFICDVNLNELINSYIPKDMRDDEKYYGNTDDEEEEEDTVSQVCGEDEESQDGRDIDIDENNITSQPLSIQSPIISDVLSLYQKEMNPEVMDDNVVNLTDDDSDVDHVAQNHTHTIIIDDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_01360905;
80% Identity: -