Basic Information

Gene Symbol
-
Assembly
GCA_949316085.1
Location
OX438993.1:8427805-8433417[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.62 1.3e+03 0.6 0.1 3 13 75 85 73 86 0.87
2 7 0.0013 2.7 9.2 0.0 21 44 338 362 326 364 0.86
3 7 0.067 1.4e+02 3.7 0.1 22 45 441 463 419 464 0.76
4 7 0.0046 9.8 7.4 0.2 22 46 579 607 561 607 0.76
5 7 7.2e-05 0.15 13.2 0.1 3 45 658 709 656 710 0.84
6 7 0.0001 0.22 12.7 0.2 13 42 863 899 849 903 0.82
7 7 0.017 37 5.6 0.4 2 15 1057 1070 1056 1084 0.90

Sequence Information

Coding Sequence
ATGGATCATACAGTAGTGGTGAAGACTGAGATGCAGTCTAATGGAGAAATTCTCTTATTCTATGTGGATGAAAATGGTGGCAATGAAGAAGGAGTATTGACGACAGTACAAAACATTGAAGATCAAGCAATAGAACTGCAACAAGATAACTCGTATATCTTACCAGATGTAGGAGACCTCCCCAATGATATCAATGTAGCCCAGACCAGCTTACAAAATGATAACTGGACAGAAGATGAGATCAGAAGACTTCTCATATTCTACActgataacaaacaaacttttatatCAGGCACAACAAAGAAGAAACATTTATGGACTGTTGCATGCAAAACAATGTTGGTTGGAAAAAATCCTAATACTTGCGATGCACAACTGAACAACCTTCGagaaaaatactttgaaatgtGTGGCCATATCCAAAAAGGTCAGTACATAAAGTGGCCATATTTTGAATTATGCCATCAGGTGTTTCATGATGAAGCCTTCAAAAGTAATGAAGACTATGATGATATAATTGAACCTCAAATAGCACATGTATCAGTGCCAAAAACCAGTCGTGAAAATATCATGGTTGTGAAAAAAGTTAACAACCGAGCATTGCCAGATGAGAAAGTTGAATTGATGCTCaatttgtatttgaaatataagAAGAGTTTCCAACAAGAATATAGGAGAAAGGGTTTGTGGGAGACCATTGCTATGGAGTTAGGGGAAGACGATGGAGAGTATTGGCAGAAgcgatttttaaattacaagcaGCACTACTCTCGGTTGCTTGAGAAGAGACACATATCAGGTCCTGAAAGTATTAATTGGCCTTACATGGAATTATTTGACAAGATATTTGAAGGTGATGAGGATTTCAGTCGTAAATATACAAACCAGGATTTGAAAGAAAGTCAGGGTGTTTTAGAAGAACCCAAACTTGATTGGGATAATACTGAAATGACggttttagttaaatattgcTTTGACTGTTTTGATGAGTTCGAAGATAGAACTATACCAAACAATTTTCTTTGGAATGAAATAGGTAGACTCCTAGACAAAACTGCTGAAGAttgcaaacaaaaatatgaagaaaTGAAGAACGCCCATTTGGATAAATATATAGAGGGTGGATATGATATGCGAAGTCGCAAACCAATAGcaatattatttgataatataatatcgAAGGAAATTGAATTGCAGATCTTTAAGATGAGAAATAAACCAGAGGAGTTAGAAATTTGGAAAAGTGCAGACCTCGATGAACTTGTACAGTTCTTTTACGCCAATGTAGAAATGTATAAAGATCTTATTTGTCACTATGTGTGCTGGGCAGCGATAGTGAAGAAAATGAAACGGGACCTACAAAGTTGTAAGGGCCAGTGGGAGGACCTGTTGTCTCTTTATAAGACTATTTTAAATGACAAGAAGGAAAACCCTGATATGCAAATAGATTGGAGATACATAGAACTTTTTGATCGAATATTTGACTATGGTATGGACACGAATCTGCTTTCAGGGTATGAAAAGTTGAAGGTACCAAGTCAGGAAAGCAGTAAAATTGGTGttaaaaaaattaaaataaaatctgagGACTTAGAAGAAGATTTCTCTGAAGATGATGAATCGTTCGACGAAAGAGGCTTCACTAAACGCACAAAGCGACGAACGGGAGACTCCAAAGCCTTCAAAATACTCGAATACTACCagaaaaataaagagaaattcTCAACGACGAATAGAAACAAACACTCCTTGTGGGAGATTCTTGCAAAGCAAATTGGAATATCAGCGACACAGTGTGCCCACAGGTTTAGGAATCTGAAACAAGTGTACACAGCTTACGTCCAAAGGGAAATTAATAAACCTGAAATGCCAATTCTCTGGCCATATTATGCTCTGTGTAAAAAAGTTTTTGGATATAGggccattaaaaataaattgaaaaatggTAAACTTGATTCAGACGACAGTGAGGATTGGTCTGCCAAGGAAATAAAGcaacttattaattatttctctcaaaacTTTGACGACATCAATATGAATGTCGATGATAGCACTAAATGGTCAGAGTTAGCAGCAGAGATAGGTAAAGGAGAAAATTCGTGTAAAGAAAAATTCTTAGAACTTAGAAAGTCTTATAGGAAGCTGAAAACAATGAGATCCAGGAACCCAGATGTGAAGATATCTTGGAAGTACTTTGCATCGTTTGAACAGATTTACAGTGCAAGGGAAGAAGGTGTTCGTGAAGCTATGGATGTGGATGATGGGAGCACATACATGGAAGTTCCTATGGAATCTGATGAAAGGAATGATCAAGAAGaAGACGAATACCAATGCATAATAGTTATACCAGAAGGGGAAGACATAGAAAACGCTCAAATAATAATTCAAGAACATTCTACAATACCAGAAGAGCAAGAGGAGTCAGCTGATCCAACCACTCAAATTGAGCCTTCCACTCAAACTGAGCTAACCATCCAAACTGAGTTAACTACTCAAACTGCAGAAGCTTCAGAATCAGCCGAAGCACCTAAAATATTTGCTAAATGGACGAAGCGAACTAAGAAAcgattacttatttattatataaactacatAAGATCTCATAAAGGCAAAGAAATAGAACCCAAAGAAATGTGGAAGGAGATAGCTACAAAATTACCAGACAAAACTCCACTGGCTTGTAGAAAAATGTTTGCAAAGTTGAAGGCGAACCATAGACAAATTGAAAGTGATGACCCTAATATTGAAAAGCCAACTTACTACACACTAATGCAGAAAGTAATGCGGTTAAAACCTAAATTTGTTAAGACGGAGAAAAACAGGACTTTAAAAGGcggaaaaatatacaaaaacgtAGTGTTACCTGATGAAAAAGTTGCACAAGCACTTCaatattacttagaaaacatTGAAGACTTTGTAAGTCCTAGATacgaaaagaaatatttgtggaCAGGGTTGGCTAATGCCGTTAATGAACCCATAACAAAAGTTTTTAAcaaactgaattatttaaaacagttcTACAACAGTGACACTGATGAGGTTGCTGGCCAAAAGACTCCTTTCGCACCCTTACTGAAAGAAATTTTAGCCAAAGAAATAGCTATAAAGTTAGTGTTGGAAAATGAACCTAAACCCGTGGTGGAAGATTTCGATATCGAAGTAGCATGGACTGATGAAGAAACGGAGCAACTCCTTGAATGGTACCTAAGTAATTTggacaaatttaaaaatccAAAATTTGTAAGGAGTTACTTGTGGATGGAAGTTTcggctattttaaataaaagtgcaATTGCTTGTTCAAAGAAAATGTCTGAAATTAGAACTCAATACAGGAATATGGTGAGGGAAACTCCTGATGAATTGGCCGGTTGGAGATTCTTGGAGTTGTGTCAGAAAATTTACGGGACAGGCAAGAAAGGAAACCAACCTGCACAGGACCCAACGGTTGCCTGA
Protein Sequence
MDHTVVVKTEMQSNGEILLFYVDENGGNEEGVLTTVQNIEDQAIELQQDNSYILPDVGDLPNDINVAQTSLQNDNWTEDEIRRLLIFYTDNKQTFISGTTKKKHLWTVACKTMLVGKNPNTCDAQLNNLREKYFEMCGHIQKGQYIKWPYFELCHQVFHDEAFKSNEDYDDIIEPQIAHVSVPKTSRENIMVVKKVNNRALPDEKVELMLNLYLKYKKSFQQEYRRKGLWETIAMELGEDDGEYWQKRFLNYKQHYSRLLEKRHISGPESINWPYMELFDKIFEGDEDFSRKYTNQDLKESQGVLEEPKLDWDNTEMTVLVKYCFDCFDEFEDRTIPNNFLWNEIGRLLDKTAEDCKQKYEEMKNAHLDKYIEGGYDMRSRKPIAILFDNIISKEIELQIFKMRNKPEELEIWKSADLDELVQFFYANVEMYKDLICHYVCWAAIVKKMKRDLQSCKGQWEDLLSLYKTILNDKKENPDMQIDWRYIELFDRIFDYGMDTNLLSGYEKLKVPSQESSKIGVKKIKIKSEDLEEDFSEDDESFDERGFTKRTKRRTGDSKAFKILEYYQKNKEKFSTTNRNKHSLWEILAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKNKLKNGKLDSDDSEDWSAKEIKQLINYFSQNFDDINMNVDDSTKWSELAAEIGKGENSCKEKFLELRKSYRKLKTMRSRNPDVKISWKYFASFEQIYSAREEGVREAMDVDDGSTYMEVPMESDERNDQEEDEYQCIIVIPEGEDIENAQIIIQEHSTIPEEQEESADPTTQIEPSTQTELTIQTELTTQTAEASESAEAPKIFAKWTKRTKKRLLIYYINYIRSHKGKEIEPKEMWKEIATKLPDKTPLACRKMFAKLKANHRQIESDDPNIEKPTYYTLMQKVMRLKPKFVKTEKNRTLKGGKIYKNVVLPDEKVAQALQYYLENIEDFVSPRYEKKYLWTGLANAVNEPITKVFNKLNYLKQFYNSDTDEVAGQKTPFAPLLKEILAKEIAIKLVLENEPKPVVEDFDIEVAWTDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSAILNKSAIACSKKMSEIRTQYRNMVRETPDELAGWRFLELCQKIYGTGKKGNQPAQDPTVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00157166;
80% Identity
-