Basic Information

Gene Symbol
-
Assembly
GCA_905220595.1
Location
HG992299.1:8666492-8671941[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.1 1.9e+03 0.0 0.0 3 13 75 85 73 88 0.87
2 7 0.021 36 5.5 0.0 22 44 342 365 329 367 0.86
3 7 0.27 4.6e+02 2.0 0.1 22 43 444 464 422 467 0.81
4 7 0.0054 9.3 7.4 0.2 22 46 582 610 564 610 0.76
5 7 0.00033 0.57 11.3 0.1 3 45 661 712 659 713 0.85
6 7 4.1e-05 0.07 14.2 0.2 13 45 866 905 851 906 0.83
7 7 0.044 76 4.5 1.5 2 15 1060 1073 1059 1082 0.90

Sequence Information

Coding Sequence
ATGGATCATGCAGTAGTGGTGAAGACTGAGATGCAATCTAATGGGGAAATTCTCTTGTTCTATGTAGATGAAAATGGTGGTAATGAAGAAGGAGTACTGACAACAGTACAAAACATAGAAGACCAAGCAATAGAACTGCAACAAGATAATTCATATATCTTACCAGATGTTGCAGACCTTCCCAATGACATCAATGTACCCCAGACCAGCTTACAGAATGATAACTGGACTGATGATGAGATCAGAAGACTTTTAGTGTTCTACACtgataacaaacaaacatttatatcaGGCACAACAAAGAAGAAACATCTATGGACCGTTGCATGCAAAACAATGTTGGTTGGAAAAAATCCCAATGCTTGTGATGCACAACTGAACAGTCTTCgagaaaaatactttgaaatgtGTGGTCATATCCAAAAAGGTCAGTACATAAATTGGCCATATTTTGAATTATGCCATCAAGTGTTTCACGATGAAATGTTCAAAAGCAGTGAAGACTATGATGATATAATTGAACCGCAAATAGCACATGTATCAGTGCCAAAACCGAGTCATGAAAATGTCATGGTTGTGAAAAAAGTTAACAATCGAGCTTCTCCAGATGAAAAAGTTGAATTGATGCTTAATTTGTACTTGAAATATAAGAAGAGTTTCCAACTAGAATATAGGAGAAAGGGATTGTGGGAGACTATTGCTATGGAGTTGGGAGAAGATGATGGGATGTTAGGAGAGTATTGGCAGAAACGGTTTTTAAATTACAAGCATCATTACTCCCGGTTGCTGGAAAAGAGAAGCATATCTGGTCCTGAAAGTATTAATTGGCCATACATGGagttatttgataaaatatttgaaggtGACGAAGATTTCAATCGCAAATATACAAATCAGGATTTACAAGAAAATCAGGTTCCCTTAGAAGAACCCAAACTTGATTGGGATAATACTGAAATGACTGTTTtagttaaatattgttttgactGTTTTGATGAGTTTGAAGATAGAACCATACCAAACAAGTTCCTTTGGAATGAAATAGGCAGACTCCTAGACAAACCTGCCGaagattgcaaacaaaaatatgaagaaaTGAAAGATGCCCATTTGGATAAATATATAGAGGGTGGATATGATATGCGTAATCGTAAACCGATAGCAATATTATATGATAACATAATATCAAAGGAAATTGAATTGCAGATAATTAAAATGAGAAATAAACCAGAGGAGTTAGAAATTTGGAAGACGGGAGACCTCGATGAACTTGTACAATTCTTATATGCAAATGTTGAACTGTACAAAGATCTTATTTGTCACTATGTATGCTGGGCAGCGGTTGTGAAAAAATTGAATCGGGATTTGCAAAGCTGTAAGGGACAATGGGAGGATCTGGTGTCTCTTTACAAGACTATTTTAAATGACAAAAAAGAAAATCCTGATATGCAAATGGATTGGAGATATATTGAACTTTTTGATAGAATATTTGACTATGGCATGGACACCAATCTACTTTCAGGGTATGAAAAGTTGAAGGTACCAAATCAAGAAAGCAGCAAAATTGGTGttaaaaaaataaaaataaaatctgacaACTTAGAAGAAGATTTCTCCGAAGATGATGAATCATTCGACGAGAGAGGCTTTACTAAACGCACCAAGAAACGAACGGGAGATTCTAAAGCCTTCAAAATACTCGAATACTAccagaaaaataaagaaaagttcTCAACTACAAACAGAAACAAACATTCCTTGTGGGAGATCCTCGCCAAACAAATTGGGATATCAGCTACTCAGTGTGCTCACAGGTTTAGAAATCTGAAACAAGTGTACACAGCTTATGTCCAGCGAGAAATTAATAAACCCGAAATGCCAATCCTCTGGCCATACTATGCTctatgtaaaaaagtttttggaTACAgggcaattaaaaataaattaaaaaatggcaAACTAGATTCAGATGATAGCGAGGACTGGTCTGCTAAAGAAATTAAacaactaattaattatttctctCAAAACTTTGACAATATTAATAGGAATGTTGATGATAGCACTAAATGGTCTGAGTTAGCAGCAGAGATAGGTAAAGGAGAAACTTCTTGTAAAGACAAGTTCTTAGAACTTAGGAAGTCTTATAGGAAACTAAAGACTATGAGGTCTCGAAACCCAGATGTGAAGATATCTTGGAAGTACTTTGCCTCATTTGAACAGATTTATAGTGCGAGGGAAGAAGGTTCACACGAAGCAATGGAAGTGGACGATGGGAGAACGTATGTGGAAGTTCAAATGGAATCTGATGAAAGGAATGATCaagaagAAGACGAATACCAATGCATAATAGTTATACCCGAAGGCGAAGATATAGAAAACGCTCAAATAATCATTCAAGATCATTCTAACATACCAGAAGAGCAAGACGAGTCGGCTGAGCTTTCATCACAAATTGAGCCATCCACTCAAACTGAGCTACCACTCGAAATTGAGCTAACCACTCAATCTGCAGAAGCTACAGAACCAGCCGAAGTACCGAAAACTTTCGTTAAATGGACAAAACGAACTAAAAaactattacttatttattacataaactaTGTAAGATCCCATAAAGGCAAAGAAATAGAACCCAAAGAAATGTGGAAAGAGATAGCAACGAAATTAACAGATAAAACTCCATTGGCTTGTAGAAAATTTTTTGCAAAGTTAAAAGCAAATCATAGACAAATTGAAACTGATGACGCTAGCATTCAAAAGCCACCTCACTACACTTTAATGCAGAAAGTTATGCGTTTAAAGCCTAAATTTGTCAAAACGGAGAAAAGCAAGACTCTAAAAGATGGAAAAGTATACAAGGATGTTGTTTTACCTGATGATAAAGTTGTGCAAGCCCTTCAAtactatttagaaaatattgaaGACTTTGTAAGCCCTAGATACGAAAAGAAATATCTATGGACAGGCCTGGCAAACGCCGTTAGTGAACCCATAACAAAAGTGTTTAACaaactgaattatttaaaacaattctaCAACAGTGATACTGATGAGGTTGCTGGCCAGAAAACCCCTTTTGCACCCttactgaaagaaattttagcaaaagaaatagctataaaattggTGTTGGAAAATGAACCTAAACCCACGGTAGAAGATACCCATATTGAAGAAGCATGGACCGATGAAGAAACTGAACAACTTCTAGAATGGTATCTAAGTAATTtggataaatttaaaaatcccAAATTTGTAAGGAGTTACTTATGGATGGAGGTTTCgggtatattaaataaaagtgcGATTGCCTGTTCAAAGAAAATGTATGAAATTAGAACTCAATACAGAAATATGGTGAGGGAAACTCCTGATCATTTGGCCGGGTGGAGATTCTTGGAATTGTGCCAGAAAATTTACGGGACAGGCAAGAAGGGAAACCAGCCTTCGCAGGATCCAACGGTTGCCTGA
Protein Sequence
MDHAVVVKTEMQSNGEILLFYVDENGGNEEGVLTTVQNIEDQAIELQQDNSYILPDVADLPNDINVPQTSLQNDNWTDDEIRRLLVFYTDNKQTFISGTTKKKHLWTVACKTMLVGKNPNACDAQLNSLREKYFEMCGHIQKGQYINWPYFELCHQVFHDEMFKSSEDYDDIIEPQIAHVSVPKPSHENVMVVKKVNNRASPDEKVELMLNLYLKYKKSFQLEYRRKGLWETIAMELGEDDGMLGEYWQKRFLNYKHHYSRLLEKRSISGPESINWPYMELFDKIFEGDEDFNRKYTNQDLQENQVPLEEPKLDWDNTEMTVLVKYCFDCFDEFEDRTIPNKFLWNEIGRLLDKPAEDCKQKYEEMKDAHLDKYIEGGYDMRNRKPIAILYDNIISKEIELQIIKMRNKPEELEIWKTGDLDELVQFLYANVELYKDLICHYVCWAAVVKKLNRDLQSCKGQWEDLVSLYKTILNDKKENPDMQMDWRYIELFDRIFDYGMDTNLLSGYEKLKVPNQESSKIGVKKIKIKSDNLEEDFSEDDESFDERGFTKRTKKRTGDSKAFKILEYYQKNKEKFSTTNRNKHSLWEILAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKNKLKNGKLDSDDSEDWSAKEIKQLINYFSQNFDNINRNVDDSTKWSELAAEIGKGETSCKDKFLELRKSYRKLKTMRSRNPDVKISWKYFASFEQIYSAREEGSHEAMEVDDGRTYVEVQMESDERNDQEEDEYQCIIVIPEGEDIENAQIIIQDHSNIPEEQDESAELSSQIEPSTQTELPLEIELTTQSAEATEPAEVPKTFVKWTKRTKKLLLIYYINYVRSHKGKEIEPKEMWKEIATKLTDKTPLACRKFFAKLKANHRQIETDDASIQKPPHYTLMQKVMRLKPKFVKTEKSKTLKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRYEKKYLWTGLANAVSEPITKVFNKLNYLKQFYNSDTDEVAGQKTPFAPLLKEILAKEIAIKLVLENEPKPTVEDTHIEEAWTDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGILNKSAIACSKKMYEIRTQYRNMVRETPDHLAGWRFLELCQKIYGTGKKGNQPSQDPTVA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00157166;
90% Identity
iTF_00822971;
80% Identity
-