Basic Information

Gene Symbol
-
Assembly
GCA_003709505.1
Location
PKRV01000976.1:1-7581[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.2 1.3e+03 -0.4 0.0 3 13 75 85 73 86 0.87
2 7 0.0005 0.54 10.5 0.0 21 44 338 362 326 364 0.86
3 7 0.3 3.3e+02 1.6 0.1 22 43 441 461 419 464 0.77
4 7 0.022 24 5.2 0.1 23 46 585 610 562 610 0.76
5 7 0.00098 1.1 9.5 0.1 3 45 661 712 659 713 0.84
6 7 0.00051 0.56 10.4 0.3 13 42 866 902 851 906 0.81
7 7 0.021 23 5.2 0.7 2 15 1060 1073 1059 1083 0.90

Sequence Information

Coding Sequence
ATGGATCATACGGTAGTAGTGAAGACGGAGATGCAGTCTAATGGGGAGATTCTCTTGTTCTATGTAGATGAAAATGGTGGCAATGAAGAAGGAGTACTGACAACAGTACAAAACATAGAAGATCAAGCCATAGAACTGCAACAAGATAACTCATACATCTTACCAGATGTCGGAGACCTGGCCAATGACATCAATGTTCCCCAGACCAGCTTACAGAATGATAACTGGACTGATGATGAGATCAGAAGACTTCTTATATTTTACACtgataacaaacaaacatttatatcgggcacaacaaaaaagaaacaccTATGGACCGTTGCATGCAAAACAATGTTGGTTGGAAAGAACCCCAATGCTTGTGATGCGCAACTGAACAGCCTACgagaaaaatactttgaaatgtGTGGTCATATCCAAAAAGGTAAGTACATAAAGTGGCCATATTTTGAATTATGCCATCAAGTGTTTCATGACGAAATCTTCAAAAGCAGTGAAGACTATGATGATATAATTGAACCACAAATAGCACATGTATCAGTGCCGAAACCGAGTCATGAAAACGTCATGGTCGTGAAAAAAGTTAACAACCGGGCTTCTCCAGATGAAAAGGTTGAATTGATGcttaatttgtatttgaaatacaaGAAGAGTTTCCAACAAGAATATAGGAGAAAGGGCCTGTGGGAGACCATTGCTATGGAGCTGGGTGAAGATGATGGAGAGTATTGGCAGAAGCGGTTCTTGAACTACAAGCAACATTACTCCAGGTTGCTTGAGAAGAAACGCATATCTGGTCCTCAAAGTATTAATTGGCCTTACATGGAGttatttgacaaaatatttgaaGGTGACGAAGATTTCAATCGCAAATATACAAATCaggatttaaaagaaaatcaggCTCCCTTAGAAGAACCTAAACTTGACTGGGATAATACTGAAATGACTGTTTTagtcaaatattgttttgactGTTTTGATGAGTTTGAGGATAGGACAATACCAAACAATTTCCTTTGGAATGAAATAGGCAGACTCCTAGACAAAACTGACGAAGATtgcaaacaaaaatatgaagaaatgAAAGATGCACATTTGGATAAATATATAGAGGGTAGCTATGATATGCGCAGTCGTAAACCGGTagcaatattatttgataacatAATATCAAAGGAAATTGAATTGCAGATCATTAAAATGCGAAATAAACCAGAGGAGTTAGAAATTTGGAAGACGGGAGACCTCGATGAACTTGTACAATTCTTTTATGCCAATGTTGAAATGTACAAAGATCTTATTTGTCACTACGTGTGCTGGGCAGCggttgtgaaaaaaattaatcgGGATTTGCAAAGCTGCAAGGGTCAATGGGAGGATCTGGTTTCTCTTTACAAGactattttaaatgataagaAGGAAAATCCTGATATGCAAATAGATTGGAGGTATATTGAACTTTTTGATAGAATATTTGACTATGGTATGGACACCAATCTACTTTCAGGGTATGAAAAGTTGAAGGAACCAAATCAAGAAAGCAGTAAAATTGGTGttaaaaaaattaaaataaaatctgaaaACTTAGAAGAGGATTTCTCTGAAGATGATGAATCGTTCGACGAGAGAGGCTTCACTAAACGCACGAAGAAACGTACAGGAGATTCCAAAGCCTTCAAAATACTCGAATACTaccagaaaaataaagaaaagttcTCAACTACAAGTAGAAACAAACATTCCCTGTGGGAGATCCTCGCTNTCCTCGCCAAACAACTTGGGATATCAGCTACTCAATGTGCCCACAGGTTTAGAAATCTGAAACAAGTTTACACAGCTTATGTTCAGCGAGAAATTAATAAACCTGAAATGCCAATCCTCTGGCCATACTATGCTCTGTGTAAAAAAGTTTTCGGATACAgggcaattaaaaataaattaaaaaatggcaAACTAGATTCAGATGATAGCGAGGACTGGTCTGCTAAAGAAATTAAacaacttattaattatttctctcAAAACTTTGACGATATTAATACGAATGTCGATGATAGCACTAAATGGTCCGAGTTGGCCGCAGATATCGGTAAAGGAGAAACTTCTTGTAAAGAGAAGTTCTTAGAACTTAGGAAGTCTTATAGGAAACTAAAGACTATGAGGTCCAGAAACCCAGATGTGAAGATATCTTGGAAGTACTTTGCCTCATTTGAACAGATTTATAGTGCGAGGGAAGAAGATTCACAAGAAGCTATGGAAGTGGACGATGGGAGAACATATGTGGAAGTTCCGATGGGGTCTGATGAAAGAAATGATCAGGAAGaAGACGAATACCAATGCATAATAGTTATACCAGAAGGCGAAGATATTGAAAACGCTCAAATAATAATTCAAGATCATTCTAACATACCAGAAGAGCAAGATGAGTCGACTGAACCTTCTACTCAAATTGAGCCATCCACTCAAACTGACCCACCACTCCAAAGTGAGCTAACCACTCAGACCGTAGAAACAGCAGAACCAACCGAACTAtcaaaaacttttgttaaatgGACGAAACGAactaaaaaacaattacttattagttacataaaatatgtgaGATCCCATAAGGGCAAAGAAATAGAACCCAAAGAAATGTGGAaagatatatcaaataaattaacagaTAAAACTCCATTGGCTTGTAGAAAAATGTTTGCAAAGTTAAAGGCGAATCATAGGCAGATGGGAACTGATGACCCTAGTATTAAAAAGCCATCTTACTACACCCTGATGCAGAAAGTCATGCGTTTAAAACCTAAATTTGTCAAAACGGAGAAAAGTCAGGCACTAAAAGATGGAAAAGTATACAAAGATGTAGTGTTACCTGATGAAAAAGTTGCGCGAGCGCTTCAATACTACTTAGAAAATATTGAAGACTTTGTAAGTCCTAGatatgaaaagaaatatctatggACAGGTCTAGCAAACGCCGTTGGTGAATCTGTAACAAAAGTGTTCAATaaactgaattatttaaaacagttttacaaCAGTGATACAGATGAAGTGGCTGGACAAAATACCCCTTTTGCACCCTTGCTGAAAGAAATTTTAGCAAAGGAAATAGCTATAAAATTGGTGTTGGAAAATGAACCTAAACCCGTGGTAGAAGATTCCGATGTCGAAGTTTCGTGGACCGATGAAGAAACTGAACAACTTTTAGAATGGTATCTAAGTAATTTggacaaatttaaaaatccaaAATTTGTAAGGAGTTACTTGTGGATGGAGATTTCGGGTATATTAAGTAAAAGTGCAATTGCCTGTTCAAAGAAAATGTATGAAATTAGAACTCAATACAGGAATATGGTAAAGGAAGCACCCGATGATTTAGCTGGGTGGAGATTTTTGGAGTTNGGATGGGGATTGGGatgggtatag
Protein Sequence
MDHTVVVKTEMQSNGEILLFYVDENGGNEEGVLTTVQNIEDQAIELQQDNSYILPDVGDLANDINVPQTSLQNDNWTDDEIRRLLIFYTDNKQTFISGTTKKKHLWTVACKTMLVGKNPNACDAQLNSLREKYFEMCGHIQKGKYIKWPYFELCHQVFHDEIFKSSEDYDDIIEPQIAHVSVPKPSHENVMVVKKVNNRASPDEKVELMLNLYLKYKKSFQQEYRRKGLWETIAMELGEDDGEYWQKRFLNYKQHYSRLLEKKRISGPQSINWPYMELFDKIFEGDEDFNRKYTNQDLKENQAPLEEPKLDWDNTEMTVLVKYCFDCFDEFEDRTIPNNFLWNEIGRLLDKTDEDCKQKYEEMKDAHLDKYIEGSYDMRSRKPVAILFDNIISKEIELQIIKMRNKPEELEIWKTGDLDELVQFFYANVEMYKDLICHYVCWAAVVKKINRDLQSCKGQWEDLVSLYKTILNDKKENPDMQIDWRYIELFDRIFDYGMDTNLLSGYEKLKEPNQESSKIGVKKIKIKSENLEEDFSEDDESFDERGFTKRTKKRTGDSKAFKILEYYQKNKEKFSTTSRNKHSLWEILAXLAKQLGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKNKLKNGKLDSDDSEDWSAKEIKQLINYFSQNFDDINTNVDDSTKWSELAADIGKGETSCKEKFLELRKSYRKLKTMRSRNPDVKISWKYFASFEQIYSAREEDSQEAMEVDDGRTYVEVPMGSDERNDQEEDEYQCIIVIPEGEDIENAQIIIQDHSNIPEEQDESTEPSTQIEPSTQTDPPLQSELTTQTVETAEPTELSKTFVKWTKRTKKQLLISYIKYVRSHKGKEIEPKEMWKDISNKLTDKTPLACRKMFAKLKANHRQMGTDDPSIKKPSYYTLMQKVMRLKPKFVKTEKSQALKDGKVYKDVVLPDEKVARALQYYLENIEDFVSPRYEKKYLWTGLANAVGESVTKVFNKLNYLKQFYNSDTDEVAGQNTPFAPLLKEILAKEIAIKLVLENEPKPVVEDSDVEVSWTDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEISGILSKSAIACSKKMYEIRTQYRNMVKEAPDDLAGWRFLEXGWGLGWV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00157166;
90% Identity
iTF_00822971;
80% Identity
-