Hpro015730.2
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905147285.1
- Location
- LR990136.1:1778900-1793799[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.15 2.9e+03 -1.6 0.7 248 280 67 99 37 102 0.50 2 3 1.6e-76 3.1e-72 244.5 27.6 1 276 118 402 118 418 0.89 3 3 1.1 2.2e+04 -4.5 16.8 1 48 419 465 419 492 0.70
Sequence Information
- Coding Sequence
- ATGGGGCACAGATCTGAAGTGGCTACCCCTCACAATAGTGACGACGAAAGTGGAGATGCTTTTACAGATGCCGATTTTGGTGACTCCGACGATGAATGTATTCTTGAGAGAAATGACAATGTAAAGGAATCTTATATTCCTGTGAACGAAGCCAAAAACGAGGAACTTGACAAAATGAATGGAACAACTAATGATGCCGAGGAGCAACCCAGGGTTAACGGTCGAAAAAATAGTGAGACTCATTCGAGTGATGCAGAGAACCAAAGCTTGGTGATATCGGATTTACGTAGAGATTCTCACGGGGACAATAGTCCTTCAATAGTCGGCATTCTTGGTGACCAGCAGAATCATGCCGAGCAGCGGTTGGCGGCGCGTCGGGCAGCACGGGCAGAGGCACGCGAGATCCGCATGCGTGAGTTGGAGCGCCAGCAAAGGGAACAGGAGGACCATGCTGATAAGGCATATGACATGTATGCAGgCGACCGGCAGCTAACACTGAATAAAGGTTACTCCACAGAGGGCGTGGGGCGGCGCGATCGCTCGCGGCTGGCGGCGCTCAGCCCCGCCGCGTCCGTGCACTCGCCGCGCCGCTCCTCCGAGGATTCCGTCGATGACAGCTTCAGCATCAAGGACCTTAGGCACGAGTTAAAAGAAGTGGAGGAGAAGTTTCGAAAGGCGATGATCTTAAACGCACAGCTTGACAACGACAAGGCGGCGCTTGGCTACCAACTCGAGCTCTTAAAGGATAGGATAGAGGAACTACACGAAGAATATGCGCAACTACAGCGTGAGCATAAAGAAAAATGCTCATCATTGGAGCGTTTGAAGCGCGAGCATGAATCCGTGACGCGGGAGCTATCGGCGGCACGCGACGCCGTCAGAGCGAGGGACATCGCGGCGGCCGCGGCCGGCAAGGCCTTCGTGGAGGCTGCCTCGCTAGAGAATAGTGACGATGTACCTGAAGGTGTTGGCGAAGCTGTGGGCTCGGTACCCCCGCTGGCGTTAGTGTCGCATCACGCAGAACAACTGCTCAATGATGCTGGGGAAGGCACactagACGTGCGGTTGCAAAACTTGGTGAGTTCGAAGCAGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTCAACGAGGAGCGGGCCGCCCGCCAGAACGGCGTCGCCAACCATCACGACCAGGAATACGAAAACGAATTGGAAGCGGTGCGCAAGGCGTCGTCGGAGGCCAAGGCGCGCGCGGCGCGGGCGGAGGCGGAGGCGGCGCTGGCGGCGGCGCACGTGGCGCGGCTGGAGGCGCAGCTGGCCCGCCTGCGCGCGCGCCAGGAGCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGCACCGCGAAGCGCTGAACCGAGTGGAGGAGCTGGAGACGGAGAACAGTCACCTCACCAAACGACTCGACAAGCTCAAGAACGCCAAGTCCGCCCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPHNSDDESGDAFTDADFGDSDDECILERNDNVKESYIPVNEAKNEELDKMNGTTNDAEEQPRVNGRKNSETHSSDAENQSLVISDLRRDSHGDNSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGDRQLTLNKGYSTEGVGRRDRSRLAALSPAASVHSPRRSSEDSVDDSFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSLERLKREHESVTRELSAARDAVRARDIAAAAAGKAFVEAASLENSDDVPEGVGEAVGSVPPLALVSHHAEQLLNDAGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELEAVRKASSEAKARAARAEAEAALAAAHVARLEAQLARLRARQEHQDEHEELLKQERRKLQREHREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -