Hpro009267.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- -
- Assembly
- GCA_905147285.1
- Location
- LR990130.1:13168777-13171268[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 2e-06 28.5 0.0 4 40 17 53 14 55 0.93
Sequence Information
- Coding Sequence
- ATGCCtcgtacttatttaaaaaagaaaaataaaacatacacttCTCAAGATTTAGCCACTGCCATACAGAAAGTAAGAAATGGGGAGCTTACCGCATATGCTGCTGCACAGAAGTACAAGATTCCAATGACCACTCTTCATGACCATGTCAAAACTAAAGATATTCTTAGACAGAATGCAGGTAGACCAATTGTTCTACCATTAGAAGATGAAAAAAAGTTAGCAAGCACTATCATAGTCATGGAAAAATGGGGATTTGGGCTCTCAAGATCAGAAATATTGGAGATTGTGGCTGAATATGTGCGCGTAAACAATATTCAGACACCATTTAAGAATAACACGCCTGGACCAGATTGGTTTATCAACTTCCGAAAACGTCACGGTTTGTCCATCAAAAAAGCACAACCCGTAGAATATGTGCGAAGAAAAATGACAGATCCATTCGTCATTGCTGAATATTTAGATTTGCTGAATAAGACCTTACAAGATTTAAATCTTTTAGAAAATCCAGAATCGATTTGGAACTTGGACGAAACATCATTGTGTCTGGATCCGACCAAAACAAAAGTGgtcggaaaaaaaaataaaccatgtGCAACCTATGGAAGTGGAAAAGAAAACATCACTGTGTTAGCAGGAGCGAGTGCCAGTGGTAAAAAGTTGCCGCCTTTGATTATTTTGAAAGGAAAATTTGTTTGGGACCAATGGATGGCTGATCTTAATAAAGATGATTACGATTTCGAATTGACATATGCTGCAAGTACTAAAGTAAAGAAAATagaattacaaaagaaaagagaTCAAGACAAAGAATATTACTTGACCAATGATGAAGACACTATTTATTTCgactga
- Protein Sequence
- MPRTYLKKKNKTYTSQDLATAIQKVRNGELTAYAAAQKYKIPMTTLHDHVKTKDILRQNAGRPIVLPLEDEKKLASTIIVMEKWGFGLSRSEILEIVAEYVRVNNIQTPFKNNTPGPDWFINFRKRHGLSIKKAQPVEYVRRKMTDPFVIAEYLDLLNKTLQDLNLLENPESIWNLDETSLCLDPTKTKVVGKKNKPCATYGSGKENITVLAGASASGKKLPPLIILKGKFVWDQWMADLNKDDYDFELTYAASTKVKKIELQKKRDQDKEYYLTNDEDTIYFD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809994; iTF_01264426; iTF_01221462; iTF_00447066;
- 90% Identity
- iTF_00447066;
- 80% Identity
- -