Hves022044.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:3253362-3274317[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.62 51 5.0 0.6 2 20 7 26 6 28 0.87 2 13 0.13 11 7.2 0.3 1 12 205 216 205 225 0.86 3 13 9 7.3e+02 1.4 1.0 1 19 354 372 354 372 0.95 4 13 1.3e-05 0.0011 19.7 0.4 1 23 379 401 379 401 0.98 5 13 0.004 0.33 11.9 2.9 1 23 414 436 414 436 0.99 6 13 3.7 3e+02 2.6 0.3 1 8 461 468 461 482 0.71 7 13 5.2e-06 0.00043 21.0 0.6 1 23 488 510 488 510 0.98 8 13 0.001 0.082 13.8 2.3 1 23 526 548 526 548 0.98 9 13 1.2e-06 9.6e-05 23.0 4.5 1 23 554 576 554 576 0.98 10 13 0.00044 0.036 14.9 6.3 1 23 582 604 582 604 0.98 11 13 0.00039 0.032 15.1 2.2 1 20 610 629 610 632 0.93 12 13 4.3e-05 0.0036 18.1 0.9 1 23 636 658 636 658 0.98 13 13 0.00052 0.043 14.7 0.1 1 23 666 689 666 689 0.96
Sequence Information
- Coding Sequence
- ATGGAAGACCTAAAATTAAAGTGTCCGCTTTGTTGCGATAAACTTTTTGATACCAAGCAAGAGCTCCTAGAGCATCTGACAAACATTTTAGAAAATTTATTATGTCCCATTTGTAGCAGTAAATGGTCAACAGTAGTTCATCTTATTGAACATTTGACCCTTGATAATTGCAAAAATAACAGCTTGTCAAAAATACCTAATGGTTTTGAAGAAGAACCACAAGAACTAAAAACTTGCAGTACTACTGAAAACTCTGTTAATGTTATTAATGAAAGTCCAAATTCAATATCTGAAACTAATTTCTCAGGTGTCCACACTTTGGACGCTGAAATTGAGAATGGAGAAGTTGGCAAGATGTATGTCGAGTTACTCAGCAAACAGTTACTAAAGCCGTGTTTACAGACACAGGAGTTAAAACTTGTGAAACATGCTGGTGGCAGCCACTATGTGATCATCACACAGCCAAGTGCTGAGATTAGTGTTGAGACAGTAGTGACCAAGCAAAATAATGATGGAACTATATCCATGACTACTGTAAAAGATATGCAATTAGAGTCGGACACACTAATAGCTCCAACCGAACATGAGCCAGAAGACAATCAGGAGGAACTGTATAGTTGTAACACTTGTGGGGTATCTTTCTCATCAGTACTAGAACACATACAGAATTATCATAATGATCAGGAGGTGGTTGTTGAGGAACCCTTAGAAGAGCCAGATCATGATGCACAATACGTCCCGGTGGAAGATACAACAACAAATGATAAGGTTGCCTCACGAAGAATGATTACTGACACTGGCGACATTGTTGAGGCGCCATCAATGTCTAAAGAGCATTCGGCAACCCAAGAACCCACTTCGGAATCCCCTGTAGAATTCTCGGAGCCATCAACGCTTGCAGCGTCTCGCGTTTACACTACGCGCTACGTACAGATAGACAATTTGTGTGACAGTGTCGTGAAGGACATTAAAGAGTCTGAAAATAAAGATAAAAATGTTCCGTACCACAAAGTAATTGTGAAAGAATTGAAGACGCAAGTAGGAACTAACGTTAAAATGTATCATTGTAAATCGTGCCAGATTTACGTTAGCAATTTGAACGAGTTTAAAATCCATCCTTGTAAAGCATTGAAGTATGCCTGCCCACATTGTCCTGTAACATACGAAAATTCCAAATCTTTATACGCACATATGAAAATACACAAAACAAAACCAGACACTCCGGACGCGCCACCATCGTACGAGTGTGAAGTTTGTTGCACAATGTTTCCAACGAATAAATCGCTCAAATTACACAAAAGAATGCACGATCCAATGAAAGCTCGTCCAATAGAACTGCCCGTAGAAAATAAAGACGGTTCAGTGGTATCCAACTGTAAATACATGTGCCAAATATGCGACAAGTTAATACCGCTGGACTACCGGACAGTGCACCAGAATTCGCACAAGTCATCCAACATGTACAACTGTGGTATATGCAATAAGAAGTTCACATCCAATGAATACTTGGATATGCACATGAATGTACATAACCTGGATAAGGTAACTGTAAGTAAGCAAGACAAATCACTGCCATACAATTGTTTGTACTGTAATAGAAGGTTCGCCAGGCCACACGAAAAAGTGAAACATGAAAGGATACATACAGGCGAGAAGCCCCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACCCACACAGGCGCGCGGCCCTACTCCTGCCCACACTGCGGGAAACGGTTCAAAGCACACAGTGTATACAATCACCATTTATTAACGCATTCGGACGTGCGGGCGTACAAGTGTCCATTCTGTCCGAAGGCGTTCAAAACTTCAGTGCAGCTAGCAGGACACAAAAATTGTCACACGAAACCCTTCTCTTGTCAGCATTGTAACAGGCCGTTCGCGTCTCTGTACGCGGTGCGCGTGCACATGGAGACGCACCTGCGGCAGAACAACCTGAAGTTCTCGTGCTCGCTGTGCGGCGCCTCGTACGCGCGCGCCTTCGCGCTCAAGGACCACGTCAAGCAGGCGCACAACCAGGACGTCGACGCCAAGGAGAACTCGCTTGCAACTCAGGACGAGGAATGGACACCTAGAGAAACGGAAGACATGCAATCCCTCAATAAAGAGTTGTCATCGGAGGTTCTCGGAATGAGTAGTAATGAGCTAATAATTCCCTAG
- Protein Sequence
- MEDLKLKCPLCCDKLFDTKQELLEHLTNILENLLCPICSSKWSTVVHLIEHLTLDNCKNNSLSKIPNGFEEEPQELKTCSTTENSVNVINESPNSISETNFSGVHTLDAEIENGEVGKMYVELLSKQLLKPCLQTQELKLVKHAGGSHYVIITQPSAEISVETVVTKQNNDGTISMTTVKDMQLESDTLIAPTEHEPEDNQEELYSCNTCGVSFSSVLEHIQNYHNDQEVVVEEPLEEPDHDAQYVPVEDTTTNDKVASRRMITDTGDIVEAPSMSKEHSATQEPTSESPVEFSEPSTLAASRVYTTRYVQIDNLCDSVVKDIKESENKDKNVPYHKVIVKELKTQVGTNVKMYHCKSCQIYVSNLNEFKIHPCKALKYACPHCPVTYENSKSLYAHMKIHKTKPDTPDAPPSYECEVCCTMFPTNKSLKLHKRMHDPMKARPIELPVENKDGSVVSNCKYMCQICDKLIPLDYRTVHQNSHKSSNMYNCGICNKKFTSNEYLDMHMNVHNLDKVTVSKQDKSLPYNCLYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYSCPHCGKRFKAHSVYNHHLLTHSDVRAYKCPFCPKAFKTSVQLAGHKNCHTKPFSCQHCNRPFASLYAVRVHMETHLRQNNLKFSCSLCGASYARAFALKDHVKQAHNQDVDAKENSLATQDEEWTPRETEDMQSLNKELSSEVLGMSSNELIIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819443;
- 90% Identity
- iTF_00819443; iTF_01430162; iTF_00428408; iTF_00429283;
- 80% Identity
- -